BLASTX nr result

ID: Coptis25_contig00011758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011758
         (1364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271020.2| PREDICTED: uncharacterized protein LOC100260...   336   1e-89
emb|CAN80760.1| hypothetical protein VITISV_014603 [Vitis vinifera]   328   3e-87
ref|XP_002303025.1| predicted protein [Populus trichocarpa] gi|2...   305   1e-80
ref|XP_003624244.1| Hydroxyproline-rich glycoprotein-like protei...   300   6e-79
ref|XP_002527287.1| chitinase, putative [Ricinus communis] gi|22...   298   2e-78

>ref|XP_002271020.2| PREDICTED: uncharacterized protein LOC100260014 [Vitis vinifera]
            gi|302144208|emb|CBI23335.3| unnamed protein product
            [Vitis vinifera]
          Length = 355

 Score =  336 bits (861), Expect = 1e-89
 Identities = 172/261 (65%), Positives = 205/261 (78%), Gaps = 8/261 (3%)
 Frame = -2

Query: 1087 APFPCFATETTFANEQISDRIDLEAILVSIDDFFNRNPFFVSGVTFIWLVVIPLTQEYLR 908
            AP PCFA+ET  +    +D+I+LE+I+VSIDDFFNRNPFFV+GVTFIWLVV+PLTQEYL+
Sbjct: 86   APLPCFASETVVS---ANDKINLESIVVSIDDFFNRNPFFVAGVTFIWLVVVPLTQEYLK 142

Query: 907  KYKFVSAIDAFQKLKSDPNSQLLDIRDKASLNYLGTPNLKILNKKAVQVEFLEGQEDGFV 728
            K+KF+SAI+AF+KL+ DPN+QLLDIRD  SL YLG+PNLKILNK  VQV+F +  ED F+
Sbjct: 143  KFKFISAINAFRKLRDDPNAQLLDIRDGKSLAYLGSPNLKILNKGVVQVQFSQDDEDAFL 202

Query: 727  KKVLQNFKDPGNTIICILDNFDGNSMKVAELLFKNGFKEAYAIRGGLRGKKGWQSIQETL 548
            K V   F DP NT +C+LDNFDGNSMKVAELLFKNGFKEAYAIRGG+RGK GWQ+IQE L
Sbjct: 203  KVVSTKFADPNNTTVCVLDNFDGNSMKVAELLFKNGFKEAYAIRGGIRGKNGWQAIQENL 262

Query: 547  LPPSVHVFPKKG-KASRQLEKKEGTDLQTNPNGQ------VPVNKDEIVENGYINKDGPS 389
            LPPSVH++PKK  K SRQ E   G  ++   N +      VP++  E V+NGY+ K   S
Sbjct: 263  LPPSVHIYPKKKVKMSRQPEVNGGIIIEGEDNSKASSSASVPLDSSETVDNGYVKKPIKS 322

Query: 388  -PQATLGSSRSLSPYPNYPDL 329
             PQA LG SRS SPYPNYPDL
Sbjct: 323  TPQAKLG-SRSSSPYPNYPDL 342


>emb|CAN80760.1| hypothetical protein VITISV_014603 [Vitis vinifera]
          Length = 636

 Score =  328 bits (840), Expect = 3e-87
 Identities = 176/300 (58%), Positives = 213/300 (71%), Gaps = 8/300 (2%)
 Frame = -2

Query: 1216 HHFSILNTTSSRKTTCIHCSIPFKNHKETSFLKFTMALITAFCAPFPCFATETTFANEQI 1037
            +H  I  T+S   +       P K  K    L     L  +   P PCFA+ET  +    
Sbjct: 46   NHLLIFKTSSPSPSPAFLSQFPLKPDKIPHLL-----LGLSSFTPLPCFASETVVS---A 97

Query: 1036 SDRIDLEAILVSIDDFFNRNPFFVSGVTFIWLVVIPLTQEYLRKYKFVSAIDAFQKLKSD 857
            +D+I+LE+I+VSIDDFFNRNPFFV+GVTFIWLVV+PLTQEYL+K+KF+SAI+AF+KL+ D
Sbjct: 98   NDKINLESIVVSIDDFFNRNPFFVAGVTFIWLVVVPLTQEYLKKFKFISAINAFRKLRDD 157

Query: 856  PNSQLLDIRDKASLNYLGTPNLKILNKKAVQVEFLEGQEDGFVKKVLQNFKDPGNTIICI 677
            PN+QLLDIRD  SL YLG+PNLKILNK  VQV+F +  ED F+K V   F DP NT +C+
Sbjct: 158  PNAQLLDIRDGKSLAYLGSPNLKILNKGVVQVQFSQDDEDAFLKSVSTKFADPKNTTVCV 217

Query: 676  LDNFDGNSMKVAELLFKNGFKEAYAIRGGLRGKKGWQSIQETLLPPSVHVFPKKG-KASR 500
            LDNFDGNSMKVAELLFKNGFKEAYAIRGG+RGK GWQ+IQE LLPPSVH++PKK  K SR
Sbjct: 218  LDNFDGNSMKVAELLFKNGFKEAYAIRGGIRGKNGWQAIQENLLPPSVHIYPKKKVKMSR 277

Query: 499  QLEKKEGTDLQTNPNGQ------VPVNKDEIVENGYINKDGPS-PQATLGSSRSLSPYPN 341
            Q E   G  ++   N +      VP++  E V+NGY+ K   S PQA LG SRS SPYPN
Sbjct: 278  QPEVNGGIIIEGEDNSKASSSASVPLDSSETVDNGYVKKPIKSTPQAKLG-SRSSSPYPN 336


>ref|XP_002303025.1| predicted protein [Populus trichocarpa] gi|222844751|gb|EEE82298.1|
            predicted protein [Populus trichocarpa]
          Length = 327

 Score =  305 bits (782), Expect = 1e-80
 Identities = 184/353 (52%), Positives = 227/353 (64%), Gaps = 17/353 (4%)
 Frame = -2

Query: 1351 MEISSLGFSSLPLIHN---CLKPSSISNATFLTSQKPLLFKPLSNFTQHHFSILNTTSSR 1181
            ME  S+  SS P I N    LKP++ S A             LS FT    S L    S 
Sbjct: 4    MESLSILLSSSPPIQNNPKTLKPATNSKAN----------SHLSKFTFSKESSLQNPLSL 53

Query: 1180 KTTCIHCSIPFKNHKETSFLKFTMALITAFCAPFPCFATET-TFANEQISDRIDLEAILV 1004
             +             +T+F   T+ L T+     PC A+ET T   EQ+SD+I+LE+ILV
Sbjct: 54   VSN------------KTTFSFTTIQLFTSL----PCLASETLTSQTEQVSDKINLESILV 97

Query: 1003 SIDDFFNRNPFFVSGVTFIWLVVIPLTQEYLRKYKFVSAIDAFQKLKSDPNSQLLDIRDK 824
            SIDDFFN+NPFFV+G TFIWLVVIPLT+EYLRKYKFVSAIDAF+KL+ +P++QLLDIRD+
Sbjct: 98   SIDDFFNKNPFFVAGCTFIWLVVIPLTEEYLRKYKFVSAIDAFRKLRDNPDAQLLDIRDR 157

Query: 823  ASLNYLGTPNLKILNKKAVQVEFLEGQEDGFVKKVLQNFKDPGNTIICILDNFDGNSMKV 644
             S+  LG+PNLK+ +K  VQVEF EG E GFVK VL+NF+DP NT +CILDNFDG+SM+V
Sbjct: 158  RSVIALGSPNLKMFDKSVVQVEFPEGDEGGFVKNVLKNFQDPANTSLCILDNFDGDSMRV 217

Query: 643  AELLFKNGFKEAYAIRGGLRGKKGWQSIQETLLPPSVHVFPKK-------------GKAS 503
            AELLFKNGFKEAYAIRGG+RGKKGW  IQETLLPPSVH+ PKK             G  +
Sbjct: 218  AELLFKNGFKEAYAIRGGVRGKKGWLEIQETLLPPSVHMKPKKKKKKAKVSQLGVNGGVA 277

Query: 502  RQLEKKEGTDLQTNPNGQVPVNKDEIVENGYINKDGPSPQATLGSSRSLSPYP 344
            +Q + ++G    T+     P+   + V+NG+INK   S        R  SPYP
Sbjct: 278  QQNDGEDGIPSSTS----FPLEGSQSVDNGHINKPMTSTPHVEIDFR--SPYP 324


>ref|XP_003624244.1| Hydroxyproline-rich glycoprotein-like protein [Medicago truncatula]
            gi|355499259|gb|AES80462.1| Hydroxyproline-rich
            glycoprotein-like protein [Medicago truncatula]
          Length = 355

 Score =  300 bits (768), Expect = 6e-79
 Identities = 168/341 (49%), Positives = 221/341 (64%), Gaps = 13/341 (3%)
 Frame = -2

Query: 1312 IHNCLKPSSISNATFLTSQKPLLFKP----LSNFTQHHFSILNTTSSRKTTCIHCSIPFK 1145
            +H    P   +   F T    LL  P     S+F Q HF+       +K +  H  IP +
Sbjct: 13   LHLSYPPFPKTQKLFTTKPFSLLSNPNPLHSSSFPQPHFN-------KKISISHSPIPLQ 65

Query: 1144 NHKETSFLKFTMALITAFCAPFPCFATETTFANEQISDRIDLEAILVSIDDFFNRNPFFV 965
            N  + S   F+ ++I  F  PF   A E     E  + RI+LE+ILVSIDDFFNR PFFV
Sbjct: 66   NLFKKS--TFSFSIINLF-TPFQSLAVEAPTLTESDAGRINLESILVSIDDFFNRYPFFV 122

Query: 964  SGVTFIWLVVIPLTQEYLRKYKFVSAIDAFQKLKSDPNSQLLDIRDKASLNYLGTPNLKI 785
            +G +FI+LV IPL +EY RKYKFVSAIDAF+KL+ + +SQLLDIRD+ ++ +LG+P+LK+
Sbjct: 123  AGCSFIYLVAIPLAEEYFRKYKFVSAIDAFRKLRDEADSQLLDIRDRKNVKFLGSPSLKM 182

Query: 784  LNKKAVQVEFLEGQEDGFVKKVLQNFKDPGNTIICILDNFDGNSMKVAELLFKNGFKEAY 605
            +NK+ VQ EF+EG EDGFVKKVL+ FKD  NT + +LD+FDGNSMKVAELLFKNGFKEAY
Sbjct: 183  VNKEVVQFEFVEGNEDGFVKKVLERFKDASNTAVFVLDSFDGNSMKVAELLFKNGFKEAY 242

Query: 604  AIRGGLRGKKGWQSIQETLLPPSVHV-FPKKGKASRQLEKKEGTDLQTNPN-------GQ 449
            AI+GG+RG++GW +IQ+TLLPPSVH+   KK K  ++L       +Q + N         
Sbjct: 243  AIKGGVRGQQGWMAIQDTLLPPSVHINRRKKTKVPKELNTNGNGAIQQSDNKNESLVSSD 302

Query: 448  VPVNKDEIVENGYINKDGPS-PQATLGSSRSLSPYPNYPDL 329
             P   ++  EN ++ K   S P+  + S  S SPYPNYPDL
Sbjct: 303  TPAVGNQETENDHVKKSVESNPEMKISSVVSSSPYPNYPDL 343


>ref|XP_002527287.1| chitinase, putative [Ricinus communis] gi|223533380|gb|EEF35131.1|
            chitinase, putative [Ricinus communis]
          Length = 315

 Score =  298 bits (763), Expect = 2e-78
 Identities = 174/305 (57%), Positives = 208/305 (68%), Gaps = 13/305 (4%)
 Frame = -2

Query: 1351 MEISSLGFSSLPLIHNCLKPSSISNATF-LTSQKPLLFKPLSNFTQHHFSILNTTSSRKT 1175
            ME  S+ FSS P I N   P +    T+ L S +  L  P +   Q+H S L  +   KT
Sbjct: 4    MESLSIIFSSSPPIQN--HPKTFEFPTYKLNSHQNNLPLPKTLSLQNHLSQLKNSLLTKT 61

Query: 1174 TCIHCSIPFKNHKETSFLKFTMALITAFCAPFPCFATET-TFANEQISDRIDLEAILVSI 998
                 S+ F           T+ L+T+     P  A+ET T   EQ+SD+I LE+ILVSI
Sbjct: 62   -----SVSFT----------TIQLLTSL----PSLASETLTSQAEQVSDKISLESILVSI 102

Query: 997  DDFFNRNPFFVSGVTFIWLVVIPLTQEYLRKYKFVSAIDAFQKLKSDPNSQLLDIRDKAS 818
            DDF NRNPFFV+G TFIWLVVIPLTQ YLRKYKF+SAI+AF+KLK D ++QLLDIRDK S
Sbjct: 103  DDFNNRNPFFVAGCTFIWLVVIPLTQRYLRKYKFISAINAFRKLKEDKDAQLLDIRDKKS 162

Query: 817  LNYLGTPNLKILNKKAVQVEFLEGQEDGFVKKVLQNFKDPGNTIICILDNFDGNSMKVAE 638
            +  LG+PNLKIL+K  VQV F E  EDGFVK VL+ F DP NT +CILDNFDGNS++VAE
Sbjct: 163  VKALGSPNLKILDKSVVQVMFSEEDEDGFVKNVLEKFPDPANTTMCILDNFDGNSIRVAE 222

Query: 637  LLFKNGFKEAYAIRGGLRGKKGWQSIQETLLPPSVHVFPKKGKA-----------SRQLE 491
            LL KNGFKEAYAI+GG+RGKKGW  IQETLLPPSVH++PKK KA           SRQ+E
Sbjct: 223  LLVKNGFKEAYAIKGGVRGKKGWLEIQETLLPPSVHMYPKKKKAKILQLGINGGVSRQME 282

Query: 490  KKEGT 476
            +K GT
Sbjct: 283  EKNGT 287


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