BLASTX nr result

ID: Coptis25_contig00011744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011744
         (1280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADZ72833.1| CONSTANS-like protein [Aquilegia formosa]              289   9e-76
ref|XP_002282509.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   218   2e-54
emb|CBI16899.3| unnamed protein product [Vitis vinifera]              218   3e-54
ref|XP_002329307.1| predicted protein [Populus trichocarpa] gi|2...   216   8e-54
gb|AFK08985.1| CONSTANTS-like protein [Fragaria x ananassa]           211   2e-52

>gb|ADZ72833.1| CONSTANS-like protein [Aquilegia formosa]
          Length = 381

 Score =  289 bits (740), Expect = 9e-76
 Identities = 183/371 (49%), Positives = 194/371 (52%), Gaps = 57/371 (15%)
 Frame = +3

Query: 90   WSRACDSCHSAACAVYCRADSAYLCTGCDA------------------------------ 179
            WSR CDSC +AACAV+CRADSAYLCTGCDA                              
Sbjct: 15   WSRVCDSCRAAACAVFCRADSAYLCTGCDARMHGANQLVSRHERVWVCEACESAPAAFTC 74

Query: 180  -------------DIHSANPLSRRHQRVP-------LYGPSANYRSRPLGSIVDMESXXX 299
                         DIHSANPL+RRH RVP       LYGPSANY SRPLGS+ DME    
Sbjct: 75   KADAASLCTTCDADIHSANPLARRHHRVPILPISGCLYGPSANYPSRPLGSVADMEDGFL 134

Query: 300  XXXXXXXXXXXXXXXXXSSWXXXXXXXXXXXXXXXXXXXX---DEYLDLEEYNSCTENXX 470
                             SSW                       DEYLD EEYNSCTEN  
Sbjct: 135  TSEVGEELEEDDDET--SSWLLLNPVNPVKNSNPSNGFLFGGEDEYLDFEEYNSCTENQY 192

Query: 471  XXXXXXXXXXXXXXXXXXXXXXIKNDGSDSVVPVXXXXXXXXXXXXXXXXLGMDYD-SSK 647
                                  +KNDG+DSVVPV                L MD++ SSK
Sbjct: 193  QDQYKQQQQQQQNNFSIQHNQ-VKNDGNDSVVPVQYGSMDQHHHQHNLH-LEMDHEASSK 250

Query: 648  TGLTXXXXXXXXXXXXXX---IVPDSTMSDTSNMHSRTPKGTIDLFSSPPIQMPAQFSPM 818
             G                   IVPDSTMS+TSNMHSRTPKGTIDLFSSPP+QMPAQFSPM
Sbjct: 251  PGFNFTASLTHSVSMSSMDASIVPDSTMSETSNMHSRTPKGTIDLFSSPPLQMPAQFSPM 310

Query: 819  DREARVLXXXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDLEAEVDQMFATSVM 998
            DREARVL              IRYASRKAYAETRPRIKGRFAKRTD+E EVDQMFATSVM
Sbjct: 311  DREARVLRYREKRKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEVDQMFATSVM 370

Query: 999  AESGYGIVPSF 1031
            AESGYGIVPSF
Sbjct: 371  AESGYGIVPSF 381


>ref|XP_002282509.1| PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Vitis vinifera]
          Length = 391

 Score =  218 bits (556), Expect = 2e-54
 Identities = 154/382 (40%), Positives = 174/382 (45%), Gaps = 68/382 (17%)
 Frame = +3

Query: 90   WSRACDSCHSAACAVYCRADSAYLCTGCDA------------------------------ 179
            W+R CD+C SAAC +YCRADSAYLC GCDA                              
Sbjct: 19   WARVCDTCRSAACTIYCRADSAYLCAGCDARIHAANRVASQHERVWVCESCERAPAAFVC 78

Query: 180  -------------DIHSANPLSRRHQRVP-------LYGPSANYRSRPLGSIVDMESXXX 299
                         DIHSANPL+RRH RVP       LYGP A   + P G++V   +   
Sbjct: 79   KADAASLCATCDADIHSANPLARRHHRVPVLPIAGCLYGPPA---TDPGGTVVRSAAEAD 135

Query: 300  XXXXXXXXXXXXXXXXX---SSWXXXXXXXXXXXXXXXXXXXX------DEYLDLEEYNS 452
                                +SW                          DEYLDL EYNS
Sbjct: 136  NGFLGQEAEETIDEEDEDEAASWLLLNPVKNNNGSSNNQNNGLLFGGEVDEYLDLVEYNS 195

Query: 453  CTENXXXXXXXXXXXXXXXXXXXXXXXXIKNDGSDSVVPVXXXXXXXXXXXXXXXX---L 623
            C EN                         KN G D VVPV                   L
Sbjct: 196  CPENQFSDQYNQQQPPPHYSVPH------KNYGGDRVVPVQCGEAKGQLHQQHQQQGFHL 249

Query: 624  GMDYDSSKTGLTXXXXXXXXXXXXXX---IVPDST-MSDTSNM--HSRTPKGTIDLFSSP 785
            GM+Y+SSK   +                 +VP++T MSD S    H R PKGTIDLFS P
Sbjct: 250  GMEYESSKAAYSYNPSISHSVSVSSMDVGVVPEATTMSDISISISHPRPPKGTIDLFSGP 309

Query: 786  PIQMPAQFSPMDREARVLXXXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDLEA 965
            PIQMP Q +PMDREARVL              IRYASRKAYAETRPRIKGRFAKRTD+E 
Sbjct: 310  PIQMPTQLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEV 369

Query: 966  EVDQMFATSVMAESGYGIVPSF 1031
            EVDQMF+T++MAESGYGIVPSF
Sbjct: 370  EVDQMFSTTLMAESGYGIVPSF 391


>emb|CBI16899.3| unnamed protein product [Vitis vinifera]
          Length = 438

 Score =  218 bits (555), Expect = 3e-54
 Identities = 152/373 (40%), Positives = 172/373 (46%), Gaps = 59/373 (15%)
 Frame = +3

Query: 90   WSRACDSCHSAACAVYCRADSAYLCTGCDA------------------------------ 179
            W+R CD+C SAAC +YCRADSAYLC GCDA                              
Sbjct: 89   WARVCDTCRSAACTIYCRADSAYLCAGCDARIHAANRVASQHERVWVCESCERAPAAFVC 148

Query: 180  -------------DIHSANPLSRRHQRVP-------LYGPSANYRSRPLGSIVDMESXXX 299
                         DIHSANPL+RRH RVP       LYGP A   + P G+  + E+   
Sbjct: 149  KADAASLCATCDADIHSANPLARRHHRVPVLPIAGCLYGPPA---TDPGGTEDEDEAASW 205

Query: 300  XXXXXXXXXXXXXXXXXSSWXXXXXXXXXXXXXXXXXXXXDEYLDLEEYNSCTENXXXXX 479
                             +                      DEYLDL EYNSC EN     
Sbjct: 206  LLLNPVKNNNGSSNNQNNG--------------LLFGGEVDEYLDLVEYNSCPENQFSDQ 251

Query: 480  XXXXXXXXXXXXXXXXXXXIKNDGSDSVVPVXXXXXXXXXXXXXXXX---LGMDYDSSKT 650
                                KN G D VVPV                   LGM+Y+SSK 
Sbjct: 252  YNQQQPPPHYSVPH------KNYGGDRVVPVQCGEAKGQLHQQHQQQGFHLGMEYESSKA 305

Query: 651  GLTXXXXXXXXXXXXXX---IVPDST-MSDTSNM--HSRTPKGTIDLFSSPPIQMPAQFS 812
              +                 +VP++T MSD S    H R PKGTIDLFS PPIQMP Q +
Sbjct: 306  AYSYNPSISHSVSVSSMDVGVVPEATTMSDISISISHPRPPKGTIDLFSGPPIQMPTQLT 365

Query: 813  PMDREARVLXXXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDLEAEVDQMFATS 992
            PMDREARVL              IRYASRKAYAETRPRIKGRFAKRTD+E EVDQMF+T+
Sbjct: 366  PMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEVDQMFSTT 425

Query: 993  VMAESGYGIVPSF 1031
            +MAESGYGIVPSF
Sbjct: 426  LMAESGYGIVPSF 438


>ref|XP_002329307.1| predicted protein [Populus trichocarpa] gi|222870761|gb|EEF07892.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  216 bits (551), Expect = 8e-54
 Identities = 138/364 (37%), Positives = 166/364 (45%), Gaps = 50/364 (13%)
 Frame = +3

Query: 90   WSRACDSCHSAACAVYCRADSAYLCTGCDA------------------------------ 179
            W+R CD+C +AAC VYCRADSAYLC GCDA                              
Sbjct: 3    WARVCDTCRAAACTVYCRADSAYLCAGCDARVHAANRVASRHERVRVCEACERAPAALLC 62

Query: 180  -------------DIHSANPLSRRHQRVPLYGPSANYRSRPLGSIVDMESXXXXXXXXXX 320
                         DIHSANPL+RRHQRVP+   S       +G                 
Sbjct: 63   KADAASLCTACDADIHSANPLARRHQRVPILPISGYLYGTQVGPAAGETEDQFMTQEGEE 122

Query: 321  XXXXXXXXXXSSWXXXXXXXXXXXXXXXXXXXX---DEYLDLEEYNSCTENXXXXXXXXX 491
                      +SW                       DEYLD+ EYNSC EN         
Sbjct: 123  TIGEEDEDEAASWLLLNPAKNSNNQNNNGFLFGGEVDEYLDIVEYNSCAENQYSDQYNQQ 182

Query: 492  XXXXXXXXXXXXXXXIKNDGSDSVVPVXXXXXXXXXXXXXXXX----LGMDYDSSKTGLT 659
                            K+ G DSVVP+                    LG++Y+ +K   +
Sbjct: 183  HYSVPP----------KSCGGDSVVPIQYGEGKDHQQQQQQQHHNFQLGLEYEPAKAAYS 232

Query: 660  XXXXXXXXXXXXXXIVPDSTMSDTSNMHSRTPKGTIDLFSSPPIQMPAQFSPMDREARVL 839
                          +VP+S MS+ S  H   P+GTIDLFSSPPIQMP+Q SPM+REARVL
Sbjct: 233  YDGSVSMSSMDVG-VVPESAMSEISISHQSAPRGTIDLFSSPPIQMPSQLSPMEREARVL 291

Query: 840  XXXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDLEAEVDQMFATSVMAESGYGI 1019
                          IRYASRKAYAETRPRIKGRFAKRTD++ EVDQMF++++MAE+ YGI
Sbjct: 292  RYREKKKARKFEKTIRYASRKAYAETRPRIKGRFAKRTDVDVEVDQMFSSTLMAETAYGI 351

Query: 1020 VPSF 1031
            VPSF
Sbjct: 352  VPSF 355


>gb|AFK08985.1| CONSTANTS-like protein [Fragaria x ananassa]
          Length = 381

 Score =  211 bits (538), Expect = 2e-52
 Identities = 144/372 (38%), Positives = 162/372 (43%), Gaps = 58/372 (15%)
 Frame = +3

Query: 90   WSRACDSCHSAACAVYCRADSAYLCTGCD------------------------------- 176
            W+R CD+C SA C VYCRADSAYLC+GCD                               
Sbjct: 16   WARVCDTCCSAPCTVYCRADSAYLCSGCDTTIHAANRVASRHERVWVCEACERAPAAFLC 75

Query: 177  ------------ADIHSANPLSRRHQRVPLYGPSANYRSRPLGSIVDMESXXXXXXXXXX 320
                        ADIHSANPL+RRHQRVP+   S +            E           
Sbjct: 76   KADAASLCTACDADIHSANPLARRHQRVPILPISGSQIMVGSAPADTTEDGFLSQEGDEE 135

Query: 321  XXXXXXXXXXSSWXXXXXXXXXXXXXXXXXXXX--------DEYLDLEEYNSCTENXXXX 476
                      +SW                            DEYLD  EYNS  +N    
Sbjct: 136  AMDEEDEDEAASWLLLNPVKNSNNHNNPNNNNNGFFFGVEVDEYLDFVEYNSSDQNQLGG 195

Query: 477  XXXXXXXXXXXXXXXXXXXXIKNDGSDSVVPVXXXXXXXXXXXXXXXX----LGMDYDSS 644
                                    G DSVVPV                    LGM+Y+SS
Sbjct: 196  TTATNDQHNYGVPHKISY------GGDSVVPVQYGEGKVTQMQMQQKHNFHQLGMEYESS 249

Query: 645  KTGLTXXXXXXXXXXXXXX---IVPDSTMSDTSNMHSRTPKGTIDLFSSPPIQMPAQFSP 815
            K                     +VPDSTMS+ S  H RTPKGTIDLF+ P IQMP Q SP
Sbjct: 250  KAAYGYDGSISHTVSVSSMDVGVVPDSTMSEMSVCHPRTPKGTIDLFNGPTIQMPTQLSP 309

Query: 816  MDREARVLXXXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDLEAEVDQMFATSV 995
            MDREARVL              IRYASRKAYAETRPRIKGRFAKRTD+E EVDQMF+TS+
Sbjct: 310  MDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIEVEVDQMFSTSL 369

Query: 996  MAESGYGIVPSF 1031
            M E+GYGIVPS+
Sbjct: 370  MRETGYGIVPSY 381


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