BLASTX nr result
ID: Coptis25_contig00011735
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011735
(1775 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit... 785 0.0
emb|CBI19841.3| unnamed protein product [Vitis vinifera] 785 0.0
ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus co... 771 0.0
ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Gly... 766 0.0
ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc... 763 0.0
>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 785 bits (2028), Expect = 0.0
Identities = 399/528 (75%), Positives = 423/528 (80%), Gaps = 1/528 (0%)
Frame = -1
Query: 1673 MGVPAFYRWLAEKYPMXXXXXXXXXXXXXDGTSIPVDTSKPNPNKLEYDNLYLDMNGIIH 1494
MGVPAFYRWLAEKYP+ DG SIPVDTSKPNPN +EYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 1493 PCFHPEDRPSPTSFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQXXXXXX 1314
PCFHPEDRPSPT+FDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 61 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 1313 XXXXXXXXXXXXXXXXXXXXXXXRKLPPKKDSQVCDSNVITPGTEFMAVLSTALQYYVHL 1134
RKLPPK+ SQVCDSNVITPGTEFM VLS ALQYY+HL
Sbjct: 121 AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL 180
Query: 1133 RLNYDPGWRSIKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 954
RLN DPGW+SIKVILSDANVPGEGEHK+MSYIRLQRNLPG+DPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240
Query: 953 LATHEVHFSILREVVFT-AQQDKCFLCGQMGHLAANCEGKAKRKSGEFDEKGEGDVVAKK 777
LATHEVHFSILRE+VFT QQDKCF+CGQMGHLAA+CEGKAKRK+GEFDEKG+ V KK
Sbjct: 241 LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK 300
Query: 776 PYQFLNIWTLREYLEYEFRIPNPPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 597
PYQFLNIWTLREYLEYE RIPN PFEIDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
Query: 596 INLLMAVYKKEFTSMCGYLTDASKPNLSTVEHFIQAVGSYEDRIFQKRARLHQRQAERIK 417
INLLMAVYKKE +M GYLTD+SKPNLS VEHFIQAVGSYED+IFQKRARLHQRQAERIK
Sbjct: 361 INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 420
Query: 416 REKAQTRRGDDAEPQLKPESLVPVTRYQGSRLASAPGPSPYQQAGSGYRSEQEISGRRES 237
REKAQ RRGDDA+PQ+KPE LVPV+RY GSRLASAP PSPYQQ
Sbjct: 421 REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQH---------------- 464
Query: 236 DLRQASAGLSVLDIKSKASALPNRKETHMRAKKVARYSSGATVGAAIV 93
+IKSK S + + +KVAR+SSGATVGAAIV
Sbjct: 465 ------------EIKSKQSG-----TSGSQGRKVARFSSGATVGAAIV 495
>emb|CBI19841.3| unnamed protein product [Vitis vinifera]
Length = 870
Score = 785 bits (2028), Expect = 0.0
Identities = 399/528 (75%), Positives = 423/528 (80%), Gaps = 1/528 (0%)
Frame = -1
Query: 1673 MGVPAFYRWLAEKYPMXXXXXXXXXXXXXDGTSIPVDTSKPNPNKLEYDNLYLDMNGIIH 1494
MGVPAFYRWLAEKYP+ DG SIPVDTSKPNPN +EYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 1493 PCFHPEDRPSPTSFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQXXXXXX 1314
PCFHPEDRPSPT+FDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 61 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 1313 XXXXXXXXXXXXXXXXXXXXXXXRKLPPKKDSQVCDSNVITPGTEFMAVLSTALQYYVHL 1134
RKLPPK+ SQVCDSNVITPGTEFM VLS ALQYY+HL
Sbjct: 121 AAKDAADAAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHL 180
Query: 1133 RLNYDPGWRSIKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 954
RLN DPGW+SIKVILSDANVPGEGEHK+MSYIRLQRNLPG+DPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240
Query: 953 LATHEVHFSILREVVFT-AQQDKCFLCGQMGHLAANCEGKAKRKSGEFDEKGEGDVVAKK 777
LATHEVHFSILRE+VFT QQDKCF+CGQMGHLAA+CEGKAKRK+GEFDEKG+ V KK
Sbjct: 241 LATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKK 300
Query: 776 PYQFLNIWTLREYLEYEFRIPNPPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 597
PYQFLNIWTLREYLEYE RIPN PFEIDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
Query: 596 INLLMAVYKKEFTSMCGYLTDASKPNLSTVEHFIQAVGSYEDRIFQKRARLHQRQAERIK 417
INLLMAVYKKE +M GYLTD+SKPNLS VEHFIQAVGSYED+IFQKRARLHQRQAERIK
Sbjct: 361 INLLMAVYKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIK 420
Query: 416 REKAQTRRGDDAEPQLKPESLVPVTRYQGSRLASAPGPSPYQQAGSGYRSEQEISGRRES 237
REKAQ RRGDDA+PQ+KPE LVPV+RY GSRLASAP PSPYQQ
Sbjct: 421 REKAQARRGDDADPQVKPEFLVPVSRYHGSRLASAPTPSPYQQH---------------- 464
Query: 236 DLRQASAGLSVLDIKSKASALPNRKETHMRAKKVARYSSGATVGAAIV 93
+IKSK S + + +KVAR+SSGATVGAAIV
Sbjct: 465 ------------EIKSKQSG-----TSGSQGRKVARFSSGATVGAAIV 495
>ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease,
putative [Ricinus communis]
Length = 1113
Score = 771 bits (1992), Expect = 0.0
Identities = 393/530 (74%), Positives = 424/530 (80%), Gaps = 3/530 (0%)
Frame = -1
Query: 1673 MGVPAFYRWLAEKYPMXXXXXXXXXXXXXDGTSIPVDTSKPNPNKLEYDNLYLDMNGIIH 1494
MGVPAFYRWLAEKYP+ DG IPVD S+PNPN +EYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDAIEEEPVVIDGVKIPVDASRPNPNNIEYDNLYLDMNGIIH 60
Query: 1493 PCFHPEDRPSPTSFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQXXXXXX 1314
PCFHPEDRPSPTSF+EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 61 PCFHPEDRPSPTSFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 1313 XXXXXXXXXXXXXXXXXXXXXXXRKLPPKKDSQVCDSNVITPGTEFMAVLSTALQYYVHL 1134
RKLPPK+ SQV DSN+ITPGTEFMAVLS ALQYY+HL
Sbjct: 121 AAKDREEAAAEEERLRQEFEREGRKLPPKESSQVFDSNIITPGTEFMAVLSIALQYYIHL 180
Query: 1133 RLNYDPGWRSIKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 954
RLN DPGW+ +KVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKKVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 240
Query: 953 LATHEVHFSILREVVFT-AQQDKCFLCGQMGHLAANCEGKAKRKSGEFDEKGEGDVVAKK 777
LATHE+HFSILRE+VFT QQDKCFLCGQMGHLAA+CEGKAKRK+GEFDEKG+ VAKK
Sbjct: 241 LATHEIHFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGDEGAVAKK 300
Query: 776 PYQFLNIWTLREYLEYEFRIPNPPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 597
PYQFLNIWTLREYLE E RIPNPPF+IDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGA
Sbjct: 301 PYQFLNIWTLREYLELEMRIPNPPFKIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 360
Query: 596 INLLMAVYKKEFTSMCGYLTDASKPNLSTVEHFIQAVGSYEDRIFQKRARLHQRQAERIK 417
INLL+AVYKKEFT+M GYLTD KPNLS VEHFIQAVGSYED+IFQKRARLHQRQ+ERIK
Sbjct: 361 INLLLAVYKKEFTAMGGYLTDGCKPNLSKVEHFIQAVGSYEDKIFQKRARLHQRQSERIK 420
Query: 416 REKAQ--TRRGDDAEPQLKPESLVPVTRYQGSRLASAPGPSPYQQAGSGYRSEQEISGRR 243
REKAQ +RRGDDA+PQ++PESLVPV R+ GSRLASAP PSP+Q +
Sbjct: 421 REKAQSRSRRGDDAQPQVQPESLVPVARFHGSRLASAPSPSPFQHS------------LE 468
Query: 242 ESDLRQASAGLSVLDIKSKASALPNRKETHMRAKKVARYSSGATVGAAIV 93
+DL SA S LD K + ++A KVAR SS A+VGAAIV
Sbjct: 469 AADLDVRSAHFSALDGKGSS----------VQAHKVARLSSSASVGAAIV 508
>ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1065
Score = 766 bits (1979), Expect = 0.0
Identities = 393/527 (74%), Positives = 415/527 (78%)
Frame = -1
Query: 1673 MGVPAFYRWLAEKYPMXXXXXXXXXXXXXDGTSIPVDTSKPNPNKLEYDNLYLDMNGIIH 1494
MGVPAFYRWLAEKYPM DG IPVDTS NPN +EYDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVIVDAIEEEAVVIDGVQIPVDTSNKNPNNIEYDNLYLDMNGIIH 60
Query: 1493 PCFHPEDRPSPTSFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQXXXXXX 1314
PCFHPEDRPSPTSFDEVF+CMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 61 PCFHPEDRPSPTSFDEVFECMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 1313 XXXXXXXXXXXXXXXXXXXXXXXRKLPPKKDSQVCDSNVITPGTEFMAVLSTALQYYVHL 1134
RKLPPK +SQ DSNVITPGTEFMAVLS ALQYYVHL
Sbjct: 121 AAKDAADAAAEETRLREEFEKEGRKLPPKGESQTFDSNVITPGTEFMAVLSIALQYYVHL 180
Query: 1133 RLNYDPGWRSIKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 954
RLN DPGW++IKVILSDANVPGEGEHK+MSYIRLQRNL GYDPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIMLA 240
Query: 953 LATHEVHFSILREVVFTAQQDKCFLCGQMGHLAANCEGKAKRKSGEFDEKGEGDVVAKKP 774
LATHE+HFSILREVVFT QDKCFLCGQMGH+AANCEGKAKRK+GEFDEKGE +VAKKP
Sbjct: 241 LATHEIHFSILREVVFTPGQDKCFLCGQMGHMAANCEGKAKRKAGEFDEKGEA-IVAKKP 299
Query: 773 YQFLNIWTLREYLEYEFRIPNPPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAI 594
+QFLNIWTLREYLEYE RIPNPPFEIDFE IVDDFIFMCFFVGNDFLPHMPTLEIREGAI
Sbjct: 300 FQFLNIWTLREYLEYEMRIPNPPFEIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGAI 359
Query: 593 NLLMAVYKKEFTSMCGYLTDASKPNLSTVEHFIQAVGSYEDRIFQKRARLHQRQAERIKR 414
NLL+AVYKKEF GYLT+ S NLS VEHFIQAVGSYED+IFQKRARLHQRQ ERIKR
Sbjct: 360 NLLIAVYKKEFREFGGYLTNGSTINLSKVEHFIQAVGSYEDKIFQKRARLHQRQTERIKR 419
Query: 413 EKAQTRRGDDAEPQLKPESLVPVTRYQGSRLASAPGPSPYQQAGSGYRSEQEISGRRESD 234
EKAQ RRGDDAEPQ KPESLV V+R+ GSRLASAP PSP+Q +G Y S+ S R+++
Sbjct: 420 EKAQARRGDDAEPQFKPESLVAVSRFHGSRLASAPNPSPFQPSGH-YNSQVSASVRKDN- 477
Query: 233 LRQASAGLSVLDIKSKASALPNRKETHMRAKKVARYSSGATVGAAIV 93
KE R KVAR SSGATV AAIV
Sbjct: 478 -----------------------KEAFERPYKVARVSSGATVAAAIV 501
>ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 1101
Score = 763 bits (1971), Expect = 0.0
Identities = 387/528 (73%), Positives = 427/528 (80%), Gaps = 1/528 (0%)
Frame = -1
Query: 1673 MGVPAFYRWLAEKYPMXXXXXXXXXXXXXDGTSIPVDTSKPNPNKLEYDNLYLDMNGIIH 1494
MGVPAFYRWLAEKYP+ DG +IPVDTSKPNPNKLE+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIDGIAIPVDTSKPNPNKLEFDNLYLDMNGIIH 60
Query: 1493 PCFHPEDRPSPTSFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQXXXXXX 1314
PCFHPEDRPSPT+F EVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 61 PCFHPEDRPSPTTFSEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 1313 XXXXXXXXXXXXXXXXXXXXXXXRKLPPKKDSQVCDSNVITPGTEFMAVLSTALQYYVHL 1134
RKLPPK++SQV DSNVITPGT+FMAVLS ALQYYVH+
Sbjct: 121 AAKDAIDAAAEETRLREEFEKEGRKLPPKEESQVFDSNVITPGTDFMAVLSIALQYYVHI 180
Query: 1133 RLNYDPGWRSIKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIMLA 954
RLN DPGW++IKVILSDANVPGEGEHK+MSYIRLQRNLPG+DPNTRHCLYGLDADLIMLA
Sbjct: 181 RLNNDPGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA 240
Query: 953 LATHEVHFSILREVVFT-AQQDKCFLCGQMGHLAANCEGKAKRKSGEFDEKGEGDVVAKK 777
LATHEVHFSILRE+VFT QQ+KCFLCGQMGH AA+CEGKAKRKSGEFDEK E +V KK
Sbjct: 241 LATHEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGEFDEKVE-EVTIKK 299
Query: 776 PYQFLNIWTLREYLEYEFRIPNPPFEIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 597
PYQFL+IWTLREYLEYE RIPNPPF ID ERIVDDF+FMCFFVGNDFLPHMPTLEIREGA
Sbjct: 300 PYQFLHIWTLREYLEYEMRIPNPPFAIDIERIVDDFVFMCFFVGNDFLPHMPTLEIREGA 359
Query: 596 INLLMAVYKKEFTSMCGYLTDASKPNLSTVEHFIQAVGSYEDRIFQKRARLHQRQAERIK 417
INLL+AVYKKEF ++ GYLTD SKPNL VEHFIQAVGSYED+IFQKRARLHQ+QA+RIK
Sbjct: 360 INLLLAVYKKEFRALGGYLTDGSKPNLQRVEHFIQAVGSYEDKIFQKRARLHQKQADRIK 419
Query: 416 REKAQTRRGDDAEPQLKPESLVPVTRYQGSRLASAPGPSPYQQAGSGYRSEQEISGRRES 237
REK QTRRGDDAEPQ++P SLV V R+ SRLAS P PSPY+++G G
Sbjct: 420 REKGQTRRGDDAEPQVQP-SLVAVARFHESRLASGPCPSPYERSGVG------------- 465
Query: 236 DLRQASAGLSVLDIKSKASALPNRKETHMRAKKVARYSSGATVGAAIV 93
+A++ S ++IK+K S + T +R KVAR SSGA++GAAIV
Sbjct: 466 ---KATSRFSGMNIKNKQSLESHGSGTSVRQNKVARLSSGASIGAAIV 510