BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011733
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...   360   e-124
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...   347   e-120
ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm...   345   e-119
ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|2...   350   e-119
ref|XP_002891495.1| cytochrome c biogenesis protein family [Arab...   334   e-115

>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic
           [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed
           protein product [Vitis vinifera]
          Length = 557

 Score =  360 bits (923), Expect(2) = e-124
 Identities = 175/200 (87%), Positives = 190/200 (95%)
 Frame = +1

Query: 271 RWKFLHSAVAIRKQAFTESLPRASVCDLGVVLMGAGYEVFLKGPSLYAFKGMAGRFAPIG 450
           RW FLHSA AIRKQ F+ESLP+ASV DLGVVLMGAGYEVFLKGPSLYAFKG+AGRFAPIG
Sbjct: 209 RWNFLHSAEAIRKQEFSESLPKASVRDLGVVLMGAGYEVFLKGPSLYAFKGLAGRFAPIG 268

Query: 451 VHIAMLLIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRF 630
           VH+AMLLIM GGT SA+G+FRGSVTVPQGLNFVMGDVL P+GFLSTPT+AF+TEVHVNRF
Sbjct: 269 VHLAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLSPSGFLSTPTKAFDTEVHVNRF 328

Query: 631 YMDYYDSGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKD 810
           YMDYYDSGEV QFHTDLSLFDL+GKEVMRKTISVNDPLR++GITIYQTDWS SALQ+ KD
Sbjct: 329 YMDYYDSGEVLQFHTDLSLFDLNGKEVMRKTISVNDPLRFDGITIYQTDWSFSALQIRKD 388

Query: 811 NEGPFNLAMAPLKVNGDKKL 870
           +EGPFNLAMAPLK+NGDKKL
Sbjct: 389 DEGPFNLAMAPLKLNGDKKL 408



 Score =  112 bits (280), Expect(2) = e-124
 Identities = 50/61 (81%), Positives = 56/61 (91%)
 Frame = +3

Query: 3   FQQYPEDHPVLGFITWRWVLFFGFDHMFTSPVFLGMLILLAASLMACTYTTQIPIVKVAR 182
           FQ++PED+PVLGF TWRWVL  GFDHMF+SP+FLGML LLA SLMACTYTTQIP+VKVAR
Sbjct: 149 FQKFPEDNPVLGFFTWRWVLTLGFDHMFSSPIFLGMLALLATSLMACTYTTQIPLVKVAR 208

Query: 183 R 185
           R
Sbjct: 209 R 209


>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Glycine max]
          Length = 563

 Score =  347 bits (891), Expect(2) = e-120
 Identities = 166/200 (83%), Positives = 187/200 (93%)
 Frame = +1

Query: 271 RWKFLHSAVAIRKQAFTESLPRASVCDLGVVLMGAGYEVFLKGPSLYAFKGMAGRFAPIG 450
           RW FLHSA AIRKQ F+ESLPRAS+ D+G +LMGAGYEVFLKGPSLYAF+G+AGR AP+G
Sbjct: 215 RWSFLHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPSLYAFQGLAGRLAPVG 274

Query: 451 VHIAMLLIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRF 630
           VHIA+LLIMAGGT SA+G+FRGSVTVPQGLNFV+GDVL P GFLS+PT AFNTE+HVN+F
Sbjct: 275 VHIALLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLAPFGFLSSPTDAFNTEIHVNKF 334

Query: 631 YMDYYDSGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKD 810
            MDYY+SGEVSQFHTDLSL ++DGKEVMRKTISVNDPLRY GITIYQTDWSISALQ+LKD
Sbjct: 335 SMDYYESGEVSQFHTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKD 394

Query: 811 NEGPFNLAMAPLKVNGDKKL 870
           NEGP+NLAMAPL++NGDKKL
Sbjct: 395 NEGPYNLAMAPLQINGDKKL 414



 Score =  112 bits (281), Expect(2) = e-120
 Identities = 48/61 (78%), Positives = 55/61 (90%)
 Frame = +3

Query: 3   FQQYPEDHPVLGFITWRWVLFFGFDHMFTSPVFLGMLILLAASLMACTYTTQIPIVKVAR 182
           FQ+YPEDHPV GF TWRWVL  GFDHMFTSP+FLG+L LL ASLMACTYTTQ+P++KV+R
Sbjct: 155 FQKYPEDHPVFGFFTWRWVLTLGFDHMFTSPIFLGVLALLGASLMACTYTTQLPLIKVSR 214

Query: 183 R 185
           R
Sbjct: 215 R 215


>ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis]
           gi|223541761|gb|EEF43309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score =  345 bits (886), Expect(2) = e-119
 Identities = 163/200 (81%), Positives = 188/200 (94%)
 Frame = +1

Query: 271 RWKFLHSAVAIRKQAFTESLPRASVCDLGVVLMGAGYEVFLKGPSLYAFKGMAGRFAPIG 450
           RW FLHSA AIRKQ F ++LP+AS+ D+GV+LMGAGYEVFLKGPSLYAFKG+AGRFAPIG
Sbjct: 207 RWNFLHSAEAIRKQEFADTLPQASIQDVGVILMGAGYEVFLKGPSLYAFKGLAGRFAPIG 266

Query: 451 VHIAMLLIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRF 630
           VH+AMLLIMAG T +A+G+FRGSVTVPQGLNFV+GDVL P+GFLSTPT+AFNTEVHVN+F
Sbjct: 267 VHLAMLLIMAGATLTATGSFRGSVTVPQGLNFVVGDVLGPSGFLSTPTEAFNTEVHVNKF 326

Query: 631 YMDYYDSGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKD 810
           YMDYYDSGEVSQF++DLSL+D+DGKEV+RKTISVN+PLRY G TIYQTDWS SALQ+ K+
Sbjct: 327 YMDYYDSGEVSQFYSDLSLYDIDGKEVLRKTISVNNPLRYGGFTIYQTDWSFSALQIRKN 386

Query: 811 NEGPFNLAMAPLKVNGDKKL 870
           +EGPFNLAMAPLK+NGDKKL
Sbjct: 387 DEGPFNLAMAPLKINGDKKL 406



 Score =  110 bits (274), Expect(2) = e-119
 Identities = 49/61 (80%), Positives = 54/61 (88%)
 Frame = +3

Query: 3   FQQYPEDHPVLGFITWRWVLFFGFDHMFTSPVFLGMLILLAASLMACTYTTQIPIVKVAR 182
           FQ YPE++PVLGF TWRW+L  GFDHMF+SPVFLGML LL  SLMACTYTTQIP+VKVAR
Sbjct: 147 FQNYPEENPVLGFFTWRWILTLGFDHMFSSPVFLGMLALLGLSLMACTYTTQIPLVKVAR 206

Query: 183 R 185
           R
Sbjct: 207 R 207


>ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|222849474|gb|EEE87021.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  350 bits (899), Expect(2) = e-119
 Identities = 168/200 (84%), Positives = 188/200 (94%)
 Frame = +1

Query: 271 RWKFLHSAVAIRKQAFTESLPRASVCDLGVVLMGAGYEVFLKGPSLYAFKGMAGRFAPIG 450
           RW +LHSA AIRKQ F+++LPRASV DLGV+LMG+GYEVFLKGPSLYAFKG+AGRF+PIG
Sbjct: 84  RWNYLHSADAIRKQEFSDNLPRASVQDLGVILMGSGYEVFLKGPSLYAFKGLAGRFSPIG 143

Query: 451 VHIAMLLIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRF 630
           VH+AMLLIMAG T SA+G+FRGSVTVPQGLNFV+GDVL P+GFLSTPT+AFNTEVHVNRF
Sbjct: 144 VHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVLGPSGFLSTPTEAFNTEVHVNRF 203

Query: 631 YMDYYDSGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKD 810
           YMDYYD G+V QFHTDLSLFDL+GKEVMRKTISVNDPLRY GIT+YQTDWSISALQV KD
Sbjct: 204 YMDYYDGGDVKQFHTDLSLFDLNGKEVMRKTISVNDPLRYGGITMYQTDWSISALQVRKD 263

Query: 811 NEGPFNLAMAPLKVNGDKKL 870
           +EGPFNLAMAPLK++GD KL
Sbjct: 264 DEGPFNLAMAPLKISGDNKL 283



 Score =  104 bits (260), Expect(2) = e-119
 Identities = 45/61 (73%), Positives = 54/61 (88%)
 Frame = +3

Query: 3   FQQYPEDHPVLGFITWRWVLFFGFDHMFTSPVFLGMLILLAASLMACTYTTQIPIVKVAR 182
           FQ++PE++P+LGF TW+WVL  GFDHM++SPVFLGML LL  SLMACTYTTQIP+ KVAR
Sbjct: 24  FQKFPEENPLLGFFTWKWVLTLGFDHMYSSPVFLGMLALLGVSLMACTYTTQIPLAKVAR 83

Query: 183 R 185
           R
Sbjct: 84  R 84


>ref|XP_002891495.1| cytochrome c biogenesis protein family [Arabidopsis lyrata subsp.
           lyrata] gi|297337337|gb|EFH67754.1| cytochrome c
           biogenesis protein family [Arabidopsis lyrata subsp.
           lyrata]
          Length = 550

 Score =  334 bits (856), Expect(2) = e-115
 Identities = 160/200 (80%), Positives = 179/200 (89%)
 Frame = +1

Query: 271 RWKFLHSAVAIRKQAFTESLPRASVCDLGVVLMGAGYEVFLKGPSLYAFKGMAGRFAPIG 450
           RW F+ S  AI+KQ F ++LPRAS+ DLG++LMG G+EVF+KGPSLYAFKG+AGRFAPIG
Sbjct: 204 RWSFMKSDEAIKKQEFADTLPRASIQDLGMILMGDGFEVFMKGPSLYAFKGLAGRFAPIG 263

Query: 451 VHIAMLLIMAGGTYSASGAFRGSVTVPQGLNFVMGDVLQPNGFLSTPTQAFNTEVHVNRF 630
           VHIAMLLIM GGT SA+G+FRGSVTVPQGLNFVMGDVL P GF S PT AFNTEVHVNRF
Sbjct: 264 VHIAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPVGFFSIPTDAFNTEVHVNRF 323

Query: 631 YMDYYDSGEVSQFHTDLSLFDLDGKEVMRKTISVNDPLRYNGITIYQTDWSISALQVLKD 810
            MDYYDSGEVSQFH+DLSL DL+GKEV+RKTISVNDPLRY G+T+YQTDWS SALQV KD
Sbjct: 324 TMDYYDSGEVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGVTVYQTDWSFSALQVTKD 383

Query: 811 NEGPFNLAMAPLKVNGDKKL 870
            EGPFNLAMAP+K+NGDKKL
Sbjct: 384 GEGPFNLAMAPIKINGDKKL 403



 Score =  109 bits (273), Expect(2) = e-115
 Identities = 47/61 (77%), Positives = 56/61 (91%)
 Frame = +3

Query: 3   FQQYPEDHPVLGFITWRWVLFFGFDHMFTSPVFLGMLILLAASLMACTYTTQIPIVKVAR 182
           FQ+YPED+PVLGF TWRW+   G DHM+++P+FLGML+LLAASLMACTYTTQIP+VKVAR
Sbjct: 144 FQKYPEDNPVLGFFTWRWISTLGLDHMYSAPIFLGMLVLLAASLMACTYTTQIPLVKVAR 203

Query: 183 R 185
           R
Sbjct: 204 R 204