BLASTX nr result

ID: Coptis25_contig00011729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011729
         (1698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276440.2| PREDICTED: probable glycosyltransferase At5g...   553   e-155
dbj|BAJ84793.1| predicted protein [Hordeum vulgare subsp. vulgare]    524   e-146
ref|XP_003562903.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   521   e-145
gb|ACN31783.1| unknown [Zea mays] gi|414887161|tpg|DAA63175.1| T...   518   e-144
ref|XP_004157734.1| PREDICTED: probable beta-1,4-xylosyltransfer...   518   e-144

>ref|XP_002276440.2| PREDICTED: probable glycosyltransferase At5g11130-like [Vitis
            vinifera] gi|147815974|emb|CAN68074.1| hypothetical
            protein VITISV_007510 [Vitis vinifera]
            gi|297737986|emb|CBI27187.3| unnamed protein product
            [Vitis vinifera]
          Length = 461

 Score =  553 bits (1426), Expect = e-155
 Identities = 267/355 (75%), Positives = 309/355 (87%), Gaps = 3/355 (0%)
 Frame = +3

Query: 24   IDD--KLKYPGNQHSAEWYLFSDLVN-GKNLGEIIRVLDPEEADLFYVPFFSSLSLVVNP 194
            +DD   LKYPG+QHS EWYLFSDL+   +    ++RV DPEEADLFYV FFSSLSLVVNP
Sbjct: 103  VDDVSSLKYPGHQHSGEWYLFSDLIREDRGRRYVVRVSDPEEADLFYVSFFSSLSLVVNP 162

Query: 195  IRPXXXXXXXXXXXYSDEEMQEGLIEWLEEQVYWKRNNGWDHVFICQDPNALYKVVDRVK 374
            IRP           YSDEEMQE L+EWLE+Q YWKRNNG DHVFICQDPNAL+ +VDRVK
Sbjct: 163  IRPANGEGAGTG--YSDEEMQESLMEWLEQQEYWKRNNGRDHVFICQDPNALHLIVDRVK 220

Query: 375  NGILLVSDFGRLRGDQASLIKDVILPYSHRINPFNGDVGVDGRKSLLFFMGNRYRKQGGK 554
            NG+LLVSDFGRLR D ASL+KDVILPY+HRI  ++G++GV+ RKSLLFFMGNRYRK+GGK
Sbjct: 221  NGVLLVSDFGRLRSDTASLVKDVILPYAHRIKSYSGEIGVENRKSLLFFMGNRYRKEGGK 280

Query: 555  IRDLLFQVLKDQEDVIIKHGAQSRESRRMATQGMHSSKFCLHPAGDTPSACRLFDAIVSL 734
            IRDLLFQ+L+ +EDVIIKHGAQSRESRRMA+QGMHSSKFCLHPAGDTPSACRLFDAIVSL
Sbjct: 281  IRDLLFQILEQEEDVIIKHGAQSRESRRMASQGMHSSKFCLHPAGDTPSACRLFDAIVSL 340

Query: 735  CIPVIVSDSIELPFEDAIDYNKIAIFVDSDTAIKPGYLVEMLRKISTKRILEYQKELKEV 914
            C+PVIVSD IELPFED IDY KIAIFVDS +A+KPG+LV+ LRKI+ +RILEYQ+E++EV
Sbjct: 341  CVPVIVSDQIELPFEDVIDYRKIAIFVDSTSAVKPGFLVKNLRKITRERILEYQREMQEV 400

Query: 915  KHYFEYEDPNGTVKEIWRQVSLKLPHVRLMVNREKRLVRRELIEPDCSCLCSNKT 1079
              YFEYED NGTV EIWRQVS+KLP ++LM+NR+KRLV+RE+ EPDCSCLCSN++
Sbjct: 401  TRYFEYEDTNGTVSEIWRQVSMKLPLIKLMINRDKRLVKREMTEPDCSCLCSNQS 455


>dbj|BAJ84793.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 498

 Score =  524 bits (1350), Expect = e-146
 Identities = 254/354 (71%), Positives = 292/354 (82%), Gaps = 6/354 (1%)
 Frame = +3

Query: 27   DDKLKYPGNQHSAEWYLFSDL-VNGKNLGEIIRVLDPEEADLFYVPFFSSLSLVVNPIRP 203
            D++L+YPG+QHSAEW+LF DL   G     + RV DP EADLFYVPFFSSLSLVVNPIRP
Sbjct: 136  DEELRYPGHQHSAEWWLFKDLRQRGPRDRPVARVDDPVEADLFYVPFFSSLSLVVNPIRP 195

Query: 204  XXXXXXXXXXX-----YSDEEMQEGLIEWLEEQVYWKRNNGWDHVFICQDPNALYKVVDR 368
                            YSDE MQ+ L+EWLE Q YW+R  G DHVFICQDPNALY+VVDR
Sbjct: 196  PAAANASEAAATVGPWYSDEAMQDELVEWLERQSYWRRYRGRDHVFICQDPNALYRVVDR 255

Query: 369  VKNGILLVSDFGRLRGDQASLIKDVILPYSHRINPFNGDVGVDGRKSLLFFMGNRYRKQG 548
            + N +LLVSDFGRLRGDQASL+KDVILPYSHRINPF GDV VD R +LLFFMGNRYRK+G
Sbjct: 256  ISNAVLLVSDFGRLRGDQASLVKDVILPYSHRINPFKGDVNVDSRPALLFFMGNRYRKEG 315

Query: 549  GKIRDLLFQVLKDQEDVIIKHGAQSRESRRMATQGMHSSKFCLHPAGDTPSACRLFDAIV 728
            GKIRD LFQVL+++ DVIIKHGAQSR SRRMATQGMHSSKFCLHPAGDTPSACRLFDA+V
Sbjct: 316  GKIRDTLFQVLENEGDVIIKHGAQSRVSRRMATQGMHSSKFCLHPAGDTPSACRLFDALV 375

Query: 729  SLCIPVIVSDSIELPFEDAIDYNKIAIFVDSDTAIKPGYLVEMLRKISTKRILEYQKELK 908
            SLC+PVIVSD IELPFED IDY+ I+IFVD+  AI+PG+L  MLRK+S++RILEYQ+E++
Sbjct: 376  SLCVPVIVSDHIELPFEDVIDYSNISIFVDTSKAIQPGFLTSMLRKVSSERILEYQREIQ 435

Query: 909  EVKHYFEYEDPNGTVKEIWRQVSLKLPHVRLMVNREKRLVRRELIEPDCSCLCS 1070
             VKHYFEYEDPNG V +IWRQVS+K P ++L++NR KRLV R   E DCSC+CS
Sbjct: 436  RVKHYFEYEDPNGPVNQIWRQVSMKAPLIKLLINRNKRLVERGTNETDCSCICS 489


>ref|XP_003562903.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
            [Brachypodium distachyon]
          Length = 498

 Score =  521 bits (1343), Expect = e-145
 Identities = 247/352 (70%), Positives = 292/352 (82%), Gaps = 4/352 (1%)
 Frame = +3

Query: 27   DDKLKYPGNQHSAEWYLFSDLVN-GKNLGEIIRVLDPEEADLFYVPFFSSLSLVVNPIRP 203
            D++L+YPG+QHSAEW+LF DL   G     + RV DP EADLFYVPFFSSLSLVVNPIRP
Sbjct: 138  DEELRYPGHQHSAEWWLFKDLRRRGPRERPVARVDDPAEADLFYVPFFSSLSLVVNPIRP 197

Query: 204  XXXXXXXXXXX---YSDEEMQEGLIEWLEEQVYWKRNNGWDHVFICQDPNALYKVVDRVK 374
                          YSDE MQ+ L+EWLE Q YW+R+ G DHVFICQDPNALY+VVDR+ 
Sbjct: 198  LAAANASVAAAEPAYSDEAMQDELVEWLERQPYWRRHRGRDHVFICQDPNALYRVVDRIS 257

Query: 375  NGILLVSDFGRLRGDQASLIKDVILPYSHRINPFNGDVGVDGRKSLLFFMGNRYRKQGGK 554
            N +LLVSDFGRLRGDQASL+KDVILPYSHRINPF GDV ++ R +LLFFMGNRYRK+GGK
Sbjct: 258  NAVLLVSDFGRLRGDQASLVKDVILPYSHRINPFQGDVSIEARPALLFFMGNRYRKEGGK 317

Query: 555  IRDLLFQVLKDQEDVIIKHGAQSRESRRMATQGMHSSKFCLHPAGDTPSACRLFDAIVSL 734
            +RD LFQVL+++ DVIIKHG QSR SRRMATQGMHSSKFCLHPAGDTPSACRLFDA+VSL
Sbjct: 318  VRDTLFQVLENEGDVIIKHGTQSRVSRRMATQGMHSSKFCLHPAGDTPSACRLFDALVSL 377

Query: 735  CIPVIVSDSIELPFEDAIDYNKIAIFVDSDTAIKPGYLVEMLRKISTKRILEYQKELKEV 914
            C+PVI+SD IELPFED IDY+ I+IFVD+  A++PG+L  MLR++S++RILEYQ+E+K V
Sbjct: 378  CVPVIISDHIELPFEDVIDYSNISIFVDTSKAVQPGFLTSMLRRVSSERILEYQREIKRV 437

Query: 915  KHYFEYEDPNGTVKEIWRQVSLKLPHVRLMVNREKRLVRRELIEPDCSCLCS 1070
            KHYFEYEDPNG V +IW QVS+K P ++L++NR+KRLV R   E DCSC+CS
Sbjct: 438  KHYFEYEDPNGPVNQIWHQVSMKAPLIKLLINRDKRLVERATNETDCSCICS 489


>gb|ACN31783.1| unknown [Zea mays] gi|414887161|tpg|DAA63175.1| TPA: exostosin-like
            protein [Zea mays]
          Length = 500

 Score =  518 bits (1335), Expect = e-144
 Identities = 247/350 (70%), Positives = 292/350 (83%), Gaps = 2/350 (0%)
 Frame = +3

Query: 27   DDKLKYPGNQHSAEWYLFSDLVNGKNLGE-IIRVLDPEEADLFYVPFFSSLSLVVNPIR- 200
            D++L+YPG+QHSAEW+LF DL+  +     + RV DP +ADLFYVPFFSSLSLVVNPIR 
Sbjct: 141  DEQLRYPGHQHSAEWWLFKDLLRRRPQDRPVARVDDPSDADLFYVPFFSSLSLVVNPIRS 200

Query: 201  PXXXXXXXXXXXYSDEEMQEGLIEWLEEQVYWKRNNGWDHVFICQDPNALYKVVDRVKNG 380
            P           YSDE +QE L+EWLE Q+YW+R+ G DHVFICQDPNALY+VVDR+ N 
Sbjct: 201  PLAANASGAGTAYSDEALQEELLEWLERQLYWQRHRGRDHVFICQDPNALYRVVDRISNA 260

Query: 381  ILLVSDFGRLRGDQASLIKDVILPYSHRINPFNGDVGVDGRKSLLFFMGNRYRKQGGKIR 560
            +LLVSDFGRLR DQASL+KDVILPYSHRIN F G+VGVDGR SLLFFMGNRYRK+GGK+R
Sbjct: 261  VLLVSDFGRLRSDQASLVKDVILPYSHRINSFKGEVGVDGRPSLLFFMGNRYRKEGGKVR 320

Query: 561  DLLFQVLKDQEDVIIKHGAQSRESRRMATQGMHSSKFCLHPAGDTPSACRLFDAIVSLCI 740
            D LFQ+L++++DV IKHG QSRESRR ATQGMHSSKFCLHPAGDTPSACRLFDA+VSLC+
Sbjct: 321  DALFQILENEDDVTIKHGTQSRESRREATQGMHSSKFCLHPAGDTPSACRLFDALVSLCV 380

Query: 741  PVIVSDSIELPFEDAIDYNKIAIFVDSDTAIKPGYLVEMLRKISTKRILEYQKELKEVKH 920
            PVI SD IELPFED IDYNKI+IFV +  A++PGYL   LR+IS++RILEYQ+E+K+V+H
Sbjct: 381  PVIASDYIELPFEDIIDYNKISIFVGTSKAVQPGYLTSTLRRISSERILEYQREIKKVRH 440

Query: 921  YFEYEDPNGTVKEIWRQVSLKLPHVRLMVNREKRLVRRELIEPDCSCLCS 1070
            YFEYEDPNG V EIWRQVSLK P ++L+ NR+KRL+ R     DCSC+CS
Sbjct: 441  YFEYEDPNGPVNEIWRQVSLKAPLIKLLTNRDKRLLERGTNGTDCSCICS 490


>ref|XP_004157734.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX10L-like [Cucumis
            sativus]
          Length = 464

 Score =  518 bits (1334), Expect = e-144
 Identities = 245/353 (69%), Positives = 299/353 (84%), Gaps = 4/353 (1%)
 Frame = +3

Query: 36   LKYPGNQHSAEWYLFSDLVN--GKNLGE-IIRVLDPEEADLFYVPFFSSLSLVVNPIRPX 206
            LKYPG+QH AEW+LF+DL+    + +G  ++RV DPEEADLFYVPFFSSLSL+VNPIRP 
Sbjct: 107  LKYPGHQHMAEWFLFTDLLRPESERIGSAVVRVFDPEEADLFYVPFFSSLSLIVNPIRPA 166

Query: 207  XXXXXXXXXX-YSDEEMQEGLIEWLEEQVYWKRNNGWDHVFICQDPNALYKVVDRVKNGI 383
                       YSDEE Q+  +EWLE+Q YWKR+NG DHV I QDPNALY+++DRVKN I
Sbjct: 167  TGSDQQQRKLVYSDEETQDAFMEWLEKQEYWKRSNGRDHVIIAQDPNALYRLIDRVKNSI 226

Query: 384  LLVSDFGRLRGDQASLIKDVILPYSHRINPFNGDVGVDGRKSLLFFMGNRYRKQGGKIRD 563
            LLVSDFGRLR DQASL+KDVI+PYSHRIN + GD+GV+ RK+LLFFMGNRYRK+GGKIRD
Sbjct: 227  LLVSDFGRLRADQASLVKDVIVPYSHRINTYTGDIGVENRKTLLFFMGNRYRKEGGKIRD 286

Query: 564  LLFQVLKDQEDVIIKHGAQSRESRRMATQGMHSSKFCLHPAGDTPSACRLFDAIVSLCIP 743
            +LF +L+ ++DVIIKHG QSRESRR AT GMH+SKFCL+PAGDTPSACRLFD++VSLC+P
Sbjct: 287  MLFNILELEQDVIIKHGTQSRESRRAATHGMHTSKFCLNPAGDTPSACRLFDSVVSLCVP 346

Query: 744  VIVSDSIELPFEDAIDYNKIAIFVDSDTAIKPGYLVEMLRKISTKRILEYQKELKEVKHY 923
            VIVSDSIELPFED IDY+KIA+F DS +A+KP +L+  LR+IS +RIL+YQ+E+K++K Y
Sbjct: 347  VIVSDSIELPFEDVIDYSKIAVFFDSVSAVKPEFLISKLRRISEERILDYQREMKKIKRY 406

Query: 924  FEYEDPNGTVKEIWRQVSLKLPHVRLMVNREKRLVRRELIEPDCSCLCSNKTG 1082
            FEY D NGTV EIWRQVS KLP ++LM+NREKR++ R+  EP+CSCLCSN+TG
Sbjct: 407  FEYTDSNGTVNEIWRQVSQKLPLIKLMINREKRVIHRDGDEPNCSCLCSNQTG 459


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