BLASTX nr result

ID: Coptis25_contig00011726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011726
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp....   223   3e-56
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   219   3e-55
ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   218   6e-55
ref|XP_002512373.1| rac-GTP binding protein, putative [Ricinus c...   218   6e-55
ref|XP_002319545.1| predicted protein [Populus trichocarpa] gi|2...   218   7e-55

>gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]
          Length = 647

 Score =  223 bits (567), Expect = 3e-56
 Identities = 114/174 (65%), Positives = 134/174 (77%)
 Frame = -2

Query: 633 GTRKILILRQIPEDGTRKLLSNKESLAPCDVAIFVHDSSDEKSWKRAIELLVEVAGHGEK 454
           GT+K LILR+IPEDG +KLLS+KESLA CD+A+FVHDSSDE SWK+A +LLVEVA HGE 
Sbjct: 474 GTKKTLILREIPEDGVKKLLSSKESLAACDIALFVHDSSDESSWKKATDLLVEVASHGED 533

Query: 453 TGFEVPCLIVAAKDDLDMYPLAVQDSTRVNYGMGIETSIPVSAKLGDLNNLFCRIVSAAQ 274
           TG+EVPCLIVAAKDDLD +PLA+QDSTRV+  MGIE  IP+S KLGD NN+F RI SAA+
Sbjct: 534 TGYEVPCLIVAAKDDLDSFPLAIQDSTRVSQDMGIEPPIPISTKLGDFNNVFRRITSAAE 593

Query: 273 KPHLSIPITEAGRNYQMYYQPFKRPLMFISXXXXXXXXXXXXASRVYTARKISS 112
            PHLSIP TEAGR+ + Y++   R LMF+S              RVY ARK SS
Sbjct: 594 HPHLSIPETEAGRSRKHYHKLINRSLMFVSVGAAVTIVGLAAY-RVYLARKNSS 646


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score =  219 bits (559), Expect = 3e-55
 Identities = 113/174 (64%), Positives = 133/174 (76%)
 Frame = -2

Query: 633 GTRKILILRQIPEDGTRKLLSNKESLAPCDVAIFVHDSSDEKSWKRAIELLVEVAGHGEK 454
           GT+K LILR+IPEDG +KLLS+KESLA CD+A+FVHDSSDE SWK+A +LLVEVA HGE 
Sbjct: 474 GTKKTLILREIPEDGVKKLLSSKESLAACDIALFVHDSSDESSWKKATDLLVEVASHGED 533

Query: 453 TGFEVPCLIVAAKDDLDMYPLAVQDSTRVNYGMGIETSIPVSAKLGDLNNLFCRIVSAAQ 274
           TG+EVPCLIVAAKDDLD +PLA+QDSTRV+  MGIE  IP+S KLGD NN+F RI SAA+
Sbjct: 534 TGYEVPCLIVAAKDDLDSFPLAIQDSTRVSQDMGIEPPIPISTKLGDFNNVFRRITSAAE 593

Query: 273 KPHLSIPITEAGRNYQMYYQPFKRPLMFISXXXXXXXXXXXXASRVYTARKISS 112
            PHLSIP TEAGR+ + Y++     LMF+S              RVY ARK SS
Sbjct: 594 HPHLSIPETEAGRSRKHYHKLKNHSLMFVSVGAAVTIVGLAAY-RVYLARKNSS 646


>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score =  218 bits (556), Expect = 6e-55
 Identities = 112/172 (65%), Positives = 132/172 (76%)
 Frame = -2

Query: 627 RKILILRQIPEDGTRKLLSNKESLAPCDVAIFVHDSSDEKSWKRAIELLVEVAGHGEKTG 448
           +K LILR+IPEDG +KLLS+KESLA CD+A+FVHDSSDE SWK+A +LLVEVA HGE TG
Sbjct: 477 KKTLILREIPEDGVKKLLSSKESLAACDIALFVHDSSDESSWKKATDLLVEVASHGEDTG 536

Query: 447 FEVPCLIVAAKDDLDMYPLAVQDSTRVNYGMGIETSIPVSAKLGDLNNLFCRIVSAAQKP 268
           +EVPCLIVAAKDDLD +PLA+QDSTRV+  MGIE  IP+S KLGD NN+F RI SAA+ P
Sbjct: 537 YEVPCLIVAAKDDLDSFPLAIQDSTRVSQDMGIEPPIPISTKLGDFNNVFRRITSAAEHP 596

Query: 267 HLSIPITEAGRNYQMYYQPFKRPLMFISXXXXXXXXXXXXASRVYTARKISS 112
           HLSIP TEAGR+ + Y++   R LMF+S              RVY ARK SS
Sbjct: 597 HLSIPETEAGRSRKHYHKLINRSLMFVSVGAAVTIVGLAAY-RVYLARKNSS 647


>ref|XP_002512373.1| rac-GTP binding protein, putative [Ricinus communis]
           gi|223548334|gb|EEF49825.1| rac-GTP binding protein,
           putative [Ricinus communis]
          Length = 583

 Score =  218 bits (556), Expect = 6e-55
 Identities = 109/174 (62%), Positives = 134/174 (77%)
 Frame = -2

Query: 633 GTRKILILRQIPEDGTRKLLSNKESLAPCDVAIFVHDSSDEKSWKRAIELLVEVAGHGEK 454
           G +K L+LR+IPE+G +KLLSNKESLA CD+AIFVHDSSDE SW+RA ELLVEVA HGE 
Sbjct: 410 GIKKTLVLREIPENGVKKLLSNKESLASCDIAIFVHDSSDESSWRRATELLVEVASHGED 469

Query: 453 TGFEVPCLIVAAKDDLDMYPLAVQDSTRVNYGMGIETSIPVSAKLGDLNNLFCRIVSAAQ 274
           TGFEVPCLI+AAKDDL+ +P+A+Q+STRV   MGIE  IP+S+K+GD NN+F RIV+AA+
Sbjct: 470 TGFEVPCLIIAAKDDLNSFPMAIQESTRVTQDMGIEAPIPISSKMGDTNNVFRRIVNAAE 529

Query: 273 KPHLSIPITEAGRNYQMYYQPFKRPLMFISXXXXXXXXXXXXASRVYTARKISS 112
            PHLSIP TEAGR+ + Y++   R LMF+S              RVY ARK +S
Sbjct: 530 HPHLSIPETEAGRSRKQYHRLINRSLMFVSVGAAVAIVGLAAY-RVYAARKSTS 582


>ref|XP_002319545.1| predicted protein [Populus trichocarpa] gi|222857921|gb|EEE95468.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  218 bits (555), Expect = 7e-55
 Identities = 109/174 (62%), Positives = 135/174 (77%)
 Frame = -2

Query: 633 GTRKILILRQIPEDGTRKLLSNKESLAPCDVAIFVHDSSDEKSWKRAIELLVEVAGHGEK 454
           G +K L+LR+IPEDG +KLL NKESLAPCD+A+FV+DSSD+ SWKRA ELLVEVAGHGE 
Sbjct: 478 GIKKTLVLREIPEDGVKKLLLNKESLAPCDIAVFVYDSSDQSSWKRATELLVEVAGHGED 537

Query: 453 TGFEVPCLIVAAKDDLDMYPLAVQDSTRVNYGMGIETSIPVSAKLGDLNNLFCRIVSAAQ 274
           TG+EVPCLIVAAKDDL+ +P+A+Q+STRV+  MGIE  IP+S+K+GD NN+F RIV+AA+
Sbjct: 538 TGYEVPCLIVAAKDDLNSFPMAIQESTRVSQDMGIEAPIPISSKMGDTNNVFRRIVTAAE 597

Query: 273 KPHLSIPITEAGRNYQMYYQPFKRPLMFISXXXXXXXXXXXXASRVYTARKISS 112
            PHLSIP TEAGR+ + Y +   R LMF+S              RVY AR+ SS
Sbjct: 598 HPHLSIPETEAGRSRKQYNRLVNRSLMFVSVGATVAIVGLAAY-RVYAARRNSS 650


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