BLASTX nr result

ID: Coptis25_contig00011725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011725
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966...   220   4e-55
ref|XP_002317925.1| predicted protein [Populus trichocarpa] gi|1...   217   3e-54
ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252...   211   2e-52
gb|ACU16340.1| unknown [Glycine max]                                  209   7e-52
gb|AFK36819.1| unknown [Lotus japonicus]                              198   2e-48

>ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966|gb|AES70169.1|
           Elongin-A [Medicago truncatula]
          Length = 232

 Score =  220 bits (561), Expect = 4e-55
 Identities = 106/195 (54%), Positives = 138/195 (70%)
 Frame = +2

Query: 167 KKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQGRDLSPVT 346
           +K PSLV LCVQTAIDN+RYLGN+G  D  LLE IL HCTLDQL  IE +++G DLSPVT
Sbjct: 10  RKTPSLVDLCVQTAIDNLRYLGNVGPVDHHLLERILPHCTLDQLTHIEKASEGMDLSPVT 69

Query: 347 DKLWKKFYKKEFGVDCLNTLVEKMNKRKVSFKWRELFEAKTKAVEEASMXXXXXXXXXXX 526
           DKLWKKF++K+FG+ C N ++ +M +++VSF+W +L+EAK K V +A             
Sbjct: 70  DKLWKKFFEKQFGISCTNEIIRRMTEKRVSFRWLQLYEAKGKEVAQAENEAIDRLRERYK 129

Query: 527 XXXXXKQSRQTRICTKLPPSSSKRNFWGSSGPGTNFSNAKGSLMKKARMEYLNSHEAKVH 706
                KQSRQ + CTKLPP SSKR FWG +GPG N SN K ++MKK+++E+L S E K  
Sbjct: 130 NADAKKQSRQVKTCTKLPP-SSKRRFWGDNGPGYNVSNVKSNIMKKSKIEFLKSREVKNI 188

Query: 707 ATIRKNAVQRSQSQS 751
           A ++KN++ RS S S
Sbjct: 189 AAMKKNSIPRSSSSS 203


>ref|XP_002317925.1| predicted protein [Populus trichocarpa] gi|118481523|gb|ABK92704.1|
           unknown [Populus trichocarpa]
           gi|222858598|gb|EEE96145.1| predicted protein [Populus
           trichocarpa]
          Length = 227

 Score =  217 bits (553), Expect = 3e-54
 Identities = 110/213 (51%), Positives = 148/213 (69%), Gaps = 1/213 (0%)
 Frame = +2

Query: 164 KKKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQGRDLSPV 343
           K+K PSLV LCV  A++NV+YLG++G+TD+ LL+ IL HCTLDQL  IE ST GRDLS V
Sbjct: 5   KRKVPSLVDLCVSLAVENVKYLGDVGETDLHLLDRILPHCTLDQLMHIEKSTVGRDLSSV 64

Query: 344 TDKLWKKFYKKEFGVDCLNTLVEKMNKRKVSFKWRELFEAKTKAVEEASMXXXXXXXXXX 523
           TDKLWK FY+K+FG    + ++++M ++KVSF+W +L+EAK K + EA            
Sbjct: 65  TDKLWKTFYEKQFGERSTDLVIQRMRQKKVSFRWLQLYEAKLKDIAEAENKLAARIRQLY 124

Query: 524 XXXXXXKQSRQTRICTKLPPSSSKRNFWGSSGPGTNFSNAKGSLMKKARMEYLNSHEAKV 703
                 KQSRQ R+C+K+PPSS+KR+F G SGPG N SN K +LMKKA+M++L S E + 
Sbjct: 125 KKEDDRKQSRQVRLCSKVPPSSNKRSFCGGSGPGYNLSNGKSNLMKKAKMDFLKSREVQN 184

Query: 704 HATIRKNAVQR-SQSQSIRRPTKPAGLLGKHTA 799
            A ++KNA+QR S S S+ +P  P    GK +A
Sbjct: 185 IAAMKKNALQRNSSSSSMMKP--PGSFPGKSSA 215


>ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252279 [Vitis vinifera]
           gi|302143487|emb|CBI22048.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score =  211 bits (538), Expect = 2e-52
 Identities = 117/214 (54%), Positives = 145/214 (67%)
 Frame = +2

Query: 158 MYKKKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQGRDLS 337
           M K+K PSLV LC++TAIDNVRYLG++G+TDI+LL+ IL HCT+DQL  IE  T+ RDLS
Sbjct: 4   MVKRKVPSLVDLCIRTAIDNVRYLGDVGETDINLLDHILPHCTVDQLMHIEKCTEERDLS 63

Query: 338 PVTDKLWKKFYKKEFGVDCLNTLVEKMNKRKVSFKWRELFEAKTKAVEEASMXXXXXXXX 517
            VTDKLWKKFY+KEFGV   N +VE+M  +KVSFKW +L+EAK K  +EA          
Sbjct: 64  EVTDKLWKKFYEKEFGVKSTNLVVERMKLKKVSFKWSKLYEAKLKDRDEAQKKSFDRIKQ 123

Query: 518 XXXXXXXXKQSRQTRICTKLPPSSSKRNFWGSSGPGTNFSNAKGSLMKKARMEYLNSHEA 697
                   KQSRQ +ICTK+PPSS+KR F+G  GPGT  SN K +LMKKA++E LNS E 
Sbjct: 124 LYQKEDARKQSRQVKICTKVPPSSNKRCFYG--GPGT--SNLKSNLMKKAKVECLNSPEV 179

Query: 698 KVHATIRKNAVQRSQSQSIRRPTKPAGLLGKHTA 799
           K  A ++K A+   QS+ I    K     GK  A
Sbjct: 180 KNLAAMKKQAL---QSRCIAPARKLGSFSGKDCA 210


>gb|ACU16340.1| unknown [Glycine max]
          Length = 230

 Score =  209 bits (533), Expect = 7e-52
 Identities = 103/199 (51%), Positives = 135/199 (67%)
 Frame = +2

Query: 170 KPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQGRDLSPVTD 349
           + PSLV LCVQ  IDNVRYLGN+G  D  LLE IL HCT DQL  +E ST+GR+ SPVTD
Sbjct: 13  RTPSLVDLCVQKVIDNVRYLGNVGSLDQHLLEQILPHCTADQLMHVEKSTKGRNPSPVTD 72

Query: 350 KLWKKFYKKEFGVDCLNTLVEKMNKRKVSFKWRELFEAKTKAVEEASMXXXXXXXXXXXX 529
           KLWKKFY+K+FG +  N ++++M K++V+F+W +L+EAK K   +A              
Sbjct: 73  KLWKKFYEKQFGTNNTNEVIKRMKKKRVNFRWMQLYEAKGKERAQAENEALDRIRQLYKK 132

Query: 530 XXXXKQSRQTRICTKLPPSSSKRNFWGSSGPGTNFSNAKGSLMKKARMEYLNSHEAKVHA 709
               KQSRQ R CTK+PP SSKR FWG +GPG N SN K ++MKKA++E+L SHE K  A
Sbjct: 133 EDARKQSRQVRTCTKVPP-SSKRRFWGDNGPGYNVSNVKSNIMKKAKIEFLKSHEVKNLA 191

Query: 710 TIRKNAVQRSQSQSIRRPT 766
            ++  ++QR+ S S  + T
Sbjct: 192 AMKNKSIQRNPSSSSFKKT 210


>gb|AFK36819.1| unknown [Lotus japonicus]
          Length = 222

 Score =  198 bits (504), Expect = 2e-48
 Identities = 100/201 (49%), Positives = 134/201 (66%)
 Frame = +2

Query: 149 KDPMYKKKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQGR 328
           +D +  +K PSLV LCV+  IDN+RYLGN+G  D  LLE IL HCTL+QL  +E ++ G 
Sbjct: 4   RDQVPVRKLPSLVDLCVEKVIDNLRYLGNVGSVDHHLLERILPHCTLEQLMHVEKASVGC 63

Query: 329 DLSPVTDKLWKKFYKKEFGVDCLNTLVEKMNKRKVSFKWRELFEAKTKAVEEASMXXXXX 508
           DLSPVTDKLWKKF++K+FG    N ++++M ++KVSFKW +L+EAK K + EA       
Sbjct: 64  DLSPVTDKLWKKFFEKQFGTHSTNEVIKRMREKKVSFKWMQLYEAKVKEIAEAENEAVAR 123

Query: 509 XXXXXXXXXXXKQSRQTRICTKLPPSSSKRNFWGSSGPGTNFSNAKGSLMKKARMEYLNS 688
                      KQSRQ ++CTK PPSS KR FWG +  G N SN K ++MKK+R+E L S
Sbjct: 124 IKQRYQKEDARKQSRQVQLCTKTPPSSKKR-FWGDN--GYNVSNLKSNIMKKSRIELLKS 180

Query: 689 HEAKVHATIRKNAVQRSQSQS 751
           HE K  A ++  ++QR+ S S
Sbjct: 181 HEVKNLAAMKNKSIQRNNSPS 201


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