BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011713
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]   118   4e-25
ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]      105   3e-21
ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana] ...   105   4e-21
ref|XP_004163748.1| PREDICTED: helicase SKI2W-like [Cucumis sati...   100   2e-19
ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sati...   100   2e-19

>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
          Length = 1379

 Score =  118 bits (296), Expect = 4e-25
 Identities = 71/179 (39%), Positives = 98/179 (54%), Gaps = 28/179 (15%)
 Frame = -1

Query: 455 LDLGDLMAHPYSWKVYKEQSEVKSSSDDKLSRISVQFDDLFTKAWEDDIIEESQ------ 294
           LDLGDL A+ +SWKVYK QS +K  S++ L+++S+QFDDL  KAWE+D + ES+      
Sbjct: 212 LDLGDLKAYSHSWKVYKGQSALKGKSEENLNKLSIQFDDLLKKAWEEDDVAESKEDGIIC 271

Query: 293 ----------------------HRDDAESAKAGIEMEEEGNIPRNVSDTELKKEADLCSS 180
                                 H  +++S K  ++++                E +  S+
Sbjct: 272 TFYILALGTNVCKVTDSWAKSCHSPESDSIKLEVQLD----------------EVEASSN 315

Query: 179 VHDTESLVLDEILSTDTGRLILGSNEISVPGGPQKKEAWAIASGSESIADRFCELVPDM 3
           V D ES VLDEILS ++G    G +  S  GG QKKEAWA++ G+E IAD F ELVPDM
Sbjct: 316 VGDLESSVLDEILSVESGSK-PGLDGTSDDGGRQKKEAWAVSGGNEGIADHFHELVPDM 373


>ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]
          Length = 1342

 Score =  105 bits (263), Expect = 3e-21
 Identities = 69/153 (45%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
 Frame = -1

Query: 455 LDLGDLMAHPYSWKVYKEQSEVKSSSDDKLSRISVQFDDLFTKAWEDDII--EESQHRDD 282
           LD G L  +P SW V KE + +KSSSD+KLS +SVQFDDLF KAW++D +  +E  H  +
Sbjct: 210 LDFGMLKPYPCSWNVCKEANSLKSSSDEKLSGLSVQFDDLFKKAWDEDAVGDQEDGHLSE 269

Query: 281 AESAKAGIEMEEEGNIPRNVSDTELKKEADLCSSVHDTESLVLDEILSTDTGRLILGSNE 102
            E+    I +E E      V  TE+   A      H++E + LD+ILS D+    L  + 
Sbjct: 270 VET----ITLEAE------VGTTEVSSRA------HESE-MSLDDILSADSEGSKLHLDG 312

Query: 101 ISVPGGPQKKEAWAIASGSESIADRFCELVPDM 3
            +   G QKKEAWAI   SE I D F ELVPDM
Sbjct: 313 FNDEIGQQKKEAWAIHETSEQIVDSFHELVPDM 345


>ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana]
           gi|332644703|gb|AEE78224.1| antiviral helicase SKI2
           [Arabidopsis thaliana]
          Length = 1347

 Score =  105 bits (262), Expect = 4e-21
 Identities = 65/157 (41%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
 Frame = -1

Query: 455 LDLGDLMAHPYSWKVYKEQSEVKSSSDDKLSRISVQFDDLFTKAWEDDI---IEESQHRD 285
           LDLGDLM +P +W VY++ S   ++SD+  S++S+QFDDLF KAWE+D    +E   H  
Sbjct: 212 LDLGDLMPYPQTWSVYEDHSSHGNASDENSSKLSIQFDDLFKKAWEEDTFSELEGDDHTA 271

Query: 284 DAESAKAGIEMEEEGNIPRNVSDTELKKEADLCSSVHDTESLVLDEILSTDTGRLILGSN 105
            +ES KA  E + + +I   V            S   +T+  VLDEILS+    ++   +
Sbjct: 272 GSESPKAEAEPDAKASISNEV------------SKGLETDVTVLDEILSSAKTAIM---S 316

Query: 104 EISVPGGPQK---KEAWAIASGSESIADRFCELVPDM 3
           E +V G   K   KE WA    S+ IADRF ELVPDM
Sbjct: 317 EEAVTGSSDKQLRKEGWATKGDSQDIADRFYELVPDM 353


>ref|XP_004163748.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 684

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 64/155 (41%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
 Frame = -1

Query: 455 LDLGDLMAHPYSWKVYKEQSE--VKSSSDDKLSRISVQFDDLFTKAWEDDIIEESQHRDD 282
           LDLGDL  +P SW VY+ QS    K+S  + LS +SVQFDDLF KAWE+D I        
Sbjct: 213 LDLGDLKEYPNSWNVYENQSSSSFKTSPIENLSELSVQFDDLFKKAWEEDAI-------- 264

Query: 281 AESAKAGIEMEEEGNIPR--NVSDTELKKEADLCSSVHDTESLVLDEILSTDTGRLILGS 108
            ES + G+     G  P+  ++   +  +E +  S         LDEILS ++G   L S
Sbjct: 265 -ESVEDGV---YSGQSPKAESIKSEDRVRELEAISIAPAPGISALDEILSLESGGFSLSS 320

Query: 107 NEISVPGGPQKKEAWAIASGSESIADRFCELVPDM 3
           ++ +   G QKKEAW +  G E I+ RF +LVPDM
Sbjct: 321 DQ-ATEVGAQKKEAWVVVGGREDISLRFHDLVPDM 354


>ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 1352

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 64/155 (41%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
 Frame = -1

Query: 455 LDLGDLMAHPYSWKVYKEQSE--VKSSSDDKLSRISVQFDDLFTKAWEDDIIEESQHRDD 282
           LDLGDL  +P SW VY+ QS    K+S  + LS +SVQFDDLF KAWE+D I        
Sbjct: 213 LDLGDLKEYPNSWNVYENQSSSSFKTSPIENLSELSVQFDDLFKKAWEEDAI-------- 264

Query: 281 AESAKAGIEMEEEGNIPR--NVSDTELKKEADLCSSVHDTESLVLDEILSTDTGRLILGS 108
            ES + G+     G  P+  ++   +  +E +  S         LDEILS ++G   L S
Sbjct: 265 -ESVEDGV---YSGQSPKAESIKSEDRVRELEAISIAPAPGISALDEILSLESGGFSLSS 320

Query: 107 NEISVPGGPQKKEAWAIASGSESIADRFCELVPDM 3
           ++ +   G QKKEAW +  G E I+ RF +LVPDM
Sbjct: 321 DQ-ATEVGAQKKEAWVVVGGREDISLRFHDLVPDM 354