BLASTX nr result
ID: Coptis25_contig00011711
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011711
(905 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI38239.3| unnamed protein product [Vitis vinifera] 247 4e-66
ref|XP_002309855.1| predicted protein [Populus trichocarpa] gi|2... 241 4e-66
ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [... 247 4e-66
ref|XP_002532763.1| dynamin, putative [Ricinus communis] gi|2235... 245 8e-65
ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|2... 242 8e-65
>emb|CBI38239.3| unnamed protein product [Vitis vinifera]
Length = 923
Score = 247 bits (631), Expect(2) = 4e-66
Identities = 123/178 (69%), Positives = 150/178 (84%), Gaps = 1/178 (0%)
Frame = +2
Query: 2 GGGDSHSAAQDNTASRRQSEPVHSMELALSTIQLKEPPAFLRPSETLSEQETVEITITKL 181
GG D+ +A++ + ++ SEPV S+E ++S I LKEPP L+PSE+ SEQE +EI++TKL
Sbjct: 695 GGSDNRVSAKEISTNKTYSEPVQSVEHSISMIHLKEPPTILKPSESHSEQEAIEISVTKL 754
Query: 182 LLRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNEFIEKLYSDNLFEEMLQEPDEVVLK 361
LLRSYYDIVRKNIED+VPKAIMHFLVNHTKRELHN FI KLY +NLFEEMLQEPDEV +K
Sbjct: 755 LLRSYYDIVRKNIEDAVPKAIMHFLVNHTKRELHNVFIRKLYRENLFEEMLQEPDEVAMK 814
Query: 362 RKRTDDYLCVLHQAFRTLDELPLDAETIERGYSLG-TDPTGLPKIYGLPSSTLH*TYG 532
RKRT + L VL QA RTLDELP +AET+E+GYSLG +DPTGLPKI+GLP+S+L+ T G
Sbjct: 815 RKRTSETLRVLQQALRTLDELPQEAETVEKGYSLGSSDPTGLPKIHGLPTSSLYTTSG 872
Score = 31.2 bits (69), Expect(2) = 4e-66
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 603 HVYADSNGGGHSDVFGFYPTAD 668
H ADSNGGG S + G YPT D
Sbjct: 901 HGNADSNGGGRSYMPGLYPTLD 922
>ref|XP_002309855.1| predicted protein [Populus trichocarpa] gi|222852758|gb|EEE90305.1|
predicted protein [Populus trichocarpa]
Length = 835
Score = 241 bits (616), Expect(2) = 4e-66
Identities = 121/177 (68%), Positives = 146/177 (82%), Gaps = 4/177 (2%)
Frame = +2
Query: 2 GGGD-SHSAAQDNTASRRQSEPVHS---MELALSTIQLKEPPAFLRPSETLSEQETVEIT 169
GGGD S A++N+ S+ +EP S +E +LS I L+EPP LRPSE SE E++EI
Sbjct: 608 GGGDHSRMYAKENSTSKSYNEPAQSIEPLEQSLSLIHLREPPTVLRPSENHSEHESIEIA 667
Query: 170 ITKLLLRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNEFIEKLYSDNLFEEMLQEPDE 349
+TKLLLRSYYDIVRKNIEDS+PKAIMHFLVNHTKRELHN FI KLY +NLFEEMLQEPDE
Sbjct: 668 VTKLLLRSYYDIVRKNIEDSIPKAIMHFLVNHTKRELHNVFIRKLYRENLFEEMLQEPDE 727
Query: 350 VVLKRKRTDDYLCVLHQAFRTLDELPLDAETIERGYSLGTDPTGLPKIYGLPSSTLH 520
+ +KRK+T + L VL QAFRTLDELPL+AE++ERGYSL +D TGLPKI+GLP+ST++
Sbjct: 728 IAMKRKQTREQLRVLQQAFRTLDELPLEAESVERGYSLSSDSTGLPKIHGLPTSTMY 784
Score = 37.0 bits (84), Expect(2) = 4e-66
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +3
Query: 570 KALKVSVSG--LSHVYADSNGGGHSDVFGFYPTAD 668
K+ K S SG H+YADSNG GH+ + G YPT D
Sbjct: 800 KSRKSSHSGELQPHLYADSNGSGHAYMPGLYPTVD 834
>ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [Vitis vinifera]
Length = 831
Score = 247 bits (631), Expect(2) = 4e-66
Identities = 123/178 (69%), Positives = 150/178 (84%), Gaps = 1/178 (0%)
Frame = +2
Query: 2 GGGDSHSAAQDNTASRRQSEPVHSMELALSTIQLKEPPAFLRPSETLSEQETVEITITKL 181
GG D+ +A++ + ++ SEPV S+E ++S I LKEPP L+PSE+ SEQE +EI++TKL
Sbjct: 603 GGSDNRVSAKEISTNKTYSEPVQSVEHSISMIHLKEPPTILKPSESHSEQEAIEISVTKL 662
Query: 182 LLRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNEFIEKLYSDNLFEEMLQEPDEVVLK 361
LLRSYYDIVRKNIED+VPKAIMHFLVNHTKRELHN FI KLY +NLFEEMLQEPDEV +K
Sbjct: 663 LLRSYYDIVRKNIEDAVPKAIMHFLVNHTKRELHNVFIRKLYRENLFEEMLQEPDEVAMK 722
Query: 362 RKRTDDYLCVLHQAFRTLDELPLDAETIERGYSLG-TDPTGLPKIYGLPSSTLH*TYG 532
RKRT + L VL QA RTLDELP +AET+E+GYSLG +DPTGLPKI+GLP+S+L+ T G
Sbjct: 723 RKRTSETLRVLQQALRTLDELPQEAETVEKGYSLGSSDPTGLPKIHGLPTSSLYTTSG 780
Score = 31.2 bits (69), Expect(2) = 4e-66
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 603 HVYADSNGGGHSDVFGFYPTAD 668
H ADSNGGG S + G YPT D
Sbjct: 809 HGNADSNGGGRSYMPGLYPTLD 830
>ref|XP_002532763.1| dynamin, putative [Ricinus communis] gi|223527492|gb|EEF29620.1|
dynamin, putative [Ricinus communis]
Length = 837
Score = 245 bits (625), Expect(2) = 8e-65
Identities = 123/197 (62%), Positives = 155/197 (78%), Gaps = 3/197 (1%)
Frame = +2
Query: 2 GGGDSHSAAQDNTASRRQSEPVHSM---ELALSTIQLKEPPAFLRPSETLSEQETVEITI 172
G +S +A++ ++ EPVH+M E ++S I L+EPP LRPSE+ SEQE++EI +
Sbjct: 608 GSDNSRVSAKETAITKSHIEPVHNMDALEQSMSMIYLREPPTILRPSESHSEQESIEIAV 667
Query: 173 TKLLLRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNEFIEKLYSDNLFEEMLQEPDEV 352
TKLLLRSYYDIVRKNIEDS+PKAIMHFLVNHTKRELHN FI+KLY +NLFEEMLQEP+E+
Sbjct: 668 TKLLLRSYYDIVRKNIEDSIPKAIMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEI 727
Query: 353 VLKRKRTDDYLCVLHQAFRTLDELPLDAETIERGYSLGTDPTGLPKIYGLPSSTLH*TYG 532
+KRKRT + L +L QA++TLDELPL+AET+ERGYSLG DPTGLPKI+GLP+S+L Y
Sbjct: 728 AMKRKRTRETLRILQQAYKTLDELPLEAETVERGYSLGADPTGLPKIHGLPTSSL---YS 784
Query: 533 NLSGLL*HLPETQGPES 583
SG + + P+S
Sbjct: 785 TSSGSSDYSASPKNPKS 801
Score = 29.3 bits (64), Expect(2) = 8e-65
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +3
Query: 570 KALKVSVSG--LSHVY--ADSNGGGHSDVFGFYPTAD 668
K+ K S SG SH Y ADSNGG + G YPT D
Sbjct: 800 KSRKSSHSGELQSHFYVNADSNGGSRPYMPGLYPTVD 836
>ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|222837325|gb|EEE75704.1|
predicted protein [Populus trichocarpa]
Length = 821
Score = 242 bits (618), Expect(2) = 8e-65
Identities = 123/175 (70%), Positives = 145/175 (82%), Gaps = 2/175 (1%)
Frame = +2
Query: 2 GGGD-SHSAAQDNTASRRQSEPVHSME-LALSTIQLKEPPAFLRPSETLSEQETVEITIT 175
GGGD S A++N+ S+ +EP SME S I L+EPP LRPSE+ SE E++EI +T
Sbjct: 596 GGGDHSRVYAKENSTSKSYNEPAQSMESFDQSMIHLREPPTVLRPSESHSENESIEIAVT 655
Query: 176 KLLLRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNEFIEKLYSDNLFEEMLQEPDEVV 355
KLLL+SYYDIVRKNIEDSVPKAIMHFLVNHTKRELHN FI KLY +NLFEEMLQE DE+
Sbjct: 656 KLLLKSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNVFIRKLYRENLFEEMLQEHDEIA 715
Query: 356 LKRKRTDDYLCVLHQAFRTLDELPLDAETIERGYSLGTDPTGLPKIYGLPSSTLH 520
+KRK+T + L VL QAFRTLDELPL+AET+ERGYSLG+D TGLPKI+GLP+ST+H
Sbjct: 716 MKRKQTRESLRVLQQAFRTLDELPLEAETVERGYSLGSDSTGLPKIHGLPTSTMH 770
Score = 32.0 bits (71), Expect(2) = 8e-65
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 603 HVYADSNGGGHSDVFGFYPTAD 668
H+Y+DSNG G + + G YPT D
Sbjct: 799 HLYSDSNGSGRTYMPGLYPTVD 820