BLASTX nr result

ID: Coptis25_contig00011709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011709
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320028.1| predicted protein [Populus trichocarpa] gi|2...   119   1e-26
ref|XP_002510090.1| conserved hypothetical protein [Ricinus comm...   122   1e-25
ref|XP_002301147.1| predicted protein [Populus trichocarpa] gi|2...   115   7e-25
ref|XP_002285345.1| PREDICTED: uncharacterized protein LOC100259...   108   3e-21
ref|XP_003589063.1| hypothetical protein MTR_1g017990 [Medicago ...    84   4e-17

>ref|XP_002320028.1| predicted protein [Populus trichocarpa] gi|222860801|gb|EEE98343.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  119 bits (298), Expect(2) = 1e-26
 Identities = 67/186 (36%), Positives = 103/186 (55%)
 Frame = -1

Query: 831 SLSTARGTKSYRSTXXXXXXXNPYSNRGLDKFAMVLAELDEKRRKIYEQMGSEDAKLVRF 652
           S  +A   KS +S+       NPYS+RGLDKF+ +LAEL+EK++KIY QMG ED  +VRF
Sbjct: 40  SSPSATPRKSRKSSKTGKNSKNPYSSRGLDKFSALLAELEEKKQKIYSQMGPEDVPMVRF 99

Query: 651 GYSSTRDWVPIVVKLKEQKEKKTEIIGKVKNKPASTMNNSEVLDKPQTGSSVSNEVVQEK 472
            YSS+ D +P+++K+K+QK+ K  I      K      N+E LDK    + V  + V++ 
Sbjct: 100 VYSSSNDCIPLIIKVKDQKQDKPRIGSANDIKENPNTRNNEGLDKLPVEAPVEEKQVEQP 159

Query: 471 TKLERRIKNKSLLSSRHVVVKWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVP 292
                +   K   +    + +WRR +               ++G+S AIL TS+ WY+VP
Sbjct: 160 RLETAKKTEKKSFTWNMKLHRWRRPYYYMPVALILILLLVVLFGRSVAILLTSLAWYIVP 219

Query: 291 VMNQKE 274
            ++ K+
Sbjct: 220 ALSTKK 225



 Score = 27.7 bits (60), Expect(2) = 1e-26
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -3

Query: 202 LNSRKSMKKKDYGRWLSE--NKMVAEGIKSPIVK 107
           L+++K  +KKDY R LSE    M+  G+ SP  K
Sbjct: 221 LSTKKPSQKKDYVRRLSEPAKMMINHGVSSPARK 254


>ref|XP_002510090.1| conserved hypothetical protein [Ricinus communis]
           gi|223550791|gb|EEF52277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score =  122 bits (307), Expect = 1e-25
 Identities = 71/167 (42%), Positives = 103/167 (61%), Gaps = 4/167 (2%)
 Frame = -1

Query: 765 PYSNRGLDKFAMVLAELDEKRRKIYEQMGSEDAKLVRFGYSSTRDWVPIVVKLKEQKEKK 586
           PYS RGLDKF+ +LAEL+EKR+KIY Q+GS+D   VRF YSS+ + VPIVVKLK+Q + K
Sbjct: 44  PYSTRGLDKFSALLAELEEKRQKIYSQVGSQDISFVRFVYSSSNEVVPIVVKLKDQNKAK 103

Query: 585 TEIIGKVKNKPASTMNNSEVLDK-PQTGSSVSNEV---VQEKTKLERRIKNKSLLSSRHV 418
            EI    K+KP  T + SE  DK P   S+ +++     Q + +++++ ++K  ++    
Sbjct: 104 DEI----KDKP-RTSSASETSDKLPVEASTAADDQQTNEQPRVQIDKKTEDKKKVTWNLK 158

Query: 417 VVKWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVPVMNQK 277
           + KWRR                  +G+S AILCTSI WY+VP ++ K
Sbjct: 159 LNKWRRPSFYMPIFIILILLFLAFFGRSVAILCTSIGWYIVPTLSSK 205


>ref|XP_002301147.1| predicted protein [Populus trichocarpa] gi|222842873|gb|EEE80420.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  115 bits (288), Expect(2) = 7e-25
 Identities = 61/166 (36%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
 Frame = -1

Query: 765 PYSNRGLDKFAMVLAELDEKRRKIYEQMGSEDAKLVRFGYSSTRDWVPIVVKLKEQKEKK 586
           PYS+RGLDKF+ +LAEL+EKR+KIY Q+G ED  +VRF YSS+ D +P++VK K+QK+ K
Sbjct: 58  PYSSRGLDKFSALLAELEEKRQKIYTQIGPEDVSVVRFVYSSSNDCIPVIVKAKDQKQDK 117

Query: 585 TEI--IGKVKNKPASTMNNSEVLDKPQTGSSVSNEVVQEKTKLERRIKNKSLLSSRHVVV 412
                +  VK+KP +  +   V   P    + + +  Q + + +++ + K    S   + 
Sbjct: 118 PRASRVDDVKDKPINHNSTEVVYKLPTQAPAETKQAEQPRLETDKKTEKKCFTWSIK-LN 176

Query: 411 KWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVPVMNQKE 274
           +WRR +                +G+S AIL TS+ WY+VP ++ K+
Sbjct: 177 RWRRPYYYMPVAIVLILLLLVFFGRSVAILWTSLGWYIVPTLSTKK 222



 Score = 25.8 bits (55), Expect(2) = 7e-25
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -3

Query: 202 LNSRKSMKKKDYGRWLSENKMV-AEGIKSP 116
           L+++K  KKK+  R LSE KMV   G+ SP
Sbjct: 218 LSTKKPSKKKEDVRRLSEPKMVNNHGVSSP 247


>ref|XP_002285345.1| PREDICTED: uncharacterized protein LOC100259057 [Vitis vinifera]
          Length = 250

 Score =  108 bits (269), Expect = 3e-21
 Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 2/162 (1%)
 Frame = -1

Query: 765 PYSNRGLDKFAMVLAELDEKRRKIYEQMGSEDAKLVRFGYSSTRDWVPIVVKLKEQKEKK 586
           PYS+RGLDKF+ +LA+L+EKR++IY Q+GS+D   VRF YS++ D VPIVVKL+++K   
Sbjct: 40  PYSSRGLDKFSALLADLEEKRQQIYSQVGSQDISFVRFAYSNSNDCVPIVVKLRDKK--- 96

Query: 585 TEIIGKVKNKPASTMNNSEVLDK--PQTGSSVSNEVVQEKTKLERRIKNKSLLSSRHVVV 412
              +  +K+    T ++++V+D   P    + +NE  Q   + +   K K+  S +  V 
Sbjct: 97  ---LENIKDNNV-THHSAQVVDDKFPIEAGAAANEFKQSGLETDTNTKKKTPFSWKIWVG 152

Query: 411 KWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVPVM 286
            WR+                 V+G+S AILCT + WYLVP +
Sbjct: 153 NWRQPSYYLPAIIIFILFLLTVFGRSVAILCTCLGWYLVPAI 194


>ref|XP_003589063.1| hypothetical protein MTR_1g017990 [Medicago truncatula]
           gi|355478111|gb|AES59314.1| hypothetical protein
           MTR_1g017990 [Medicago truncatula]
          Length = 285

 Score = 84.0 bits (206), Expect(2) = 4e-17
 Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
 Frame = -1

Query: 765 PYSNRGLDKFAMVLAELDEKRRKIYEQMGSEDAKLVRFGYSSTRDWVPIVVKLKEQKEKK 586
           PYS RGLDKF+ +L++L++KR+KIY QM   D   VRF +S+  D+VPIVVK+K  K ++
Sbjct: 39  PYSTRGLDKFSALLSDLNDKRQKIYSQMNPHDISFVRFVHSNKDDFVPIVVKVK-NKSQE 97

Query: 585 TEIIGKVKNKPASTMNNSEVLDKPQTGSSVSNEVVQEKTKLERRIKN----KSLLSSRHV 418
            +++      P ST+  S     P++      E  Q K ++   +KN    K L     V
Sbjct: 98  LKVVKPRNLSPKSTVKKS----SPESSIVAMEERNQPKKRISWNMKNNEMEKPLFYLPFV 153

Query: 417 VVKWRRSHXXXXXXXXXXXXXXXVYGKSFAILCTSIWWYLVPVMNQKELNSR 262
           V+                     V+G++ AI+ T I WY++P +  K++ +R
Sbjct: 154 VI--------------MILVLLTVFGRTAAIIFTCILWYVIPTL--KDIKAR 189



 Score = 31.2 bits (69), Expect(2) = 4e-17
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = -3

Query: 208 KELNSRKSMKKKDYGRWLSENKMVA---EGIKSPIVKCFRRGHSNK 80
           K++ +R S+KKKD+ R LSE KM     EG+     K + RG S K
Sbjct: 184 KDIKARNSIKKKDFVRGLSEKKMDVMNNEGVVKK--KDYVRGFSEK 227


Top