BLASTX nr result

ID: Coptis25_contig00011705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011705
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282636.1| PREDICTED: origin recognition complex subuni...   260   3e-67
ref|XP_004152733.1| PREDICTED: origin recognition complex subuni...   256   7e-66
ref|XP_003558649.1| PREDICTED: origin recognition complex subuni...   247   3e-63
ref|NP_001049192.1| Os03g0184700 [Oryza sativa Japonica Group] g...   245   1e-62
gb|AFW72565.1| hypothetical protein ZEAMMB73_553492 [Zea mays]        244   2e-62

>ref|XP_002282636.1| PREDICTED: origin recognition complex subunit 2-like [Vitis
           vinifera]
          Length = 362

 Score =  260 bits (665), Expect = 3e-67
 Identities = 120/141 (85%), Positives = 133/141 (94%)
 Frame = +3

Query: 351 LVWDKKMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQ 530
           L+WDKKMVHTQFNW WYHVPTF PYK EG+F+PLILA GGTAQ+AKTA IVLQSLTPNAQ
Sbjct: 220 LLWDKKMVHTQFNWCWYHVPTFVPYKAEGIFYPLILAHGGTAQSAKTAAIVLQSLTPNAQ 279

Query: 531 SVFKVLAEHQMAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHAD 710
           SVFKVLAEHQ+AH DEEGMP N+LY+ICRERFLVSSQITLNSHLTEF+DH+L+KTRRH+D
Sbjct: 280 SVFKVLAEHQLAHPDEEGMPVNNLYSICRERFLVSSQITLNSHLTEFKDHELIKTRRHSD 339

Query: 711 GQDCLYIPLTSEALEKLLQEI 773
           GQDCLYIPL +EALEKLLQ+I
Sbjct: 340 GQDCLYIPLATEALEKLLQDI 360


>ref|XP_004152733.1| PREDICTED: origin recognition complex subunit 2-like [Cucumis
           sativus] gi|449496004|ref|XP_004160009.1| PREDICTED:
           origin recognition complex subunit 2-like [Cucumis
           sativus]
          Length = 360

 Score =  256 bits (653), Expect = 7e-66
 Identities = 120/141 (85%), Positives = 131/141 (92%)
 Frame = +3

Query: 351 LVWDKKMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQ 530
           L+WDKKMVHTQFNW WYHVPTFAPYK+EG+FFPLILA GGTAQ+AKTA IVLQSLTPNAQ
Sbjct: 219 LLWDKKMVHTQFNWLWYHVPTFAPYKIEGMFFPLILAHGGTAQSAKTATIVLQSLTPNAQ 278

Query: 531 SVFKVLAEHQMAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHAD 710
           SVFKVL EHQ++H DEEGMP + LY ICRERFLVSSQITLNSHLTEF+DH+LVKTRRH+D
Sbjct: 279 SVFKVLIEHQLSHPDEEGMPIDKLYAICRERFLVSSQITLNSHLTEFKDHELVKTRRHSD 338

Query: 711 GQDCLYIPLTSEALEKLLQEI 773
           GQDCLYIPL SEALEKLL E+
Sbjct: 339 GQDCLYIPLPSEALEKLLTEL 359


>ref|XP_003558649.1| PREDICTED: origin recognition complex subunit 2-like [Brachypodium
           distachyon]
          Length = 374

 Score =  247 bits (630), Expect = 3e-63
 Identities = 115/141 (81%), Positives = 130/141 (92%)
 Frame = +3

Query: 351 LVWDKKMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQ 530
           L+WDKKMVHTQF WSWYHVPTFAPYKVEGVF+PLILASGG AQ  KTAL+VLQSLTPNAQ
Sbjct: 233 LLWDKKMVHTQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTTKTALVVLQSLTPNAQ 292

Query: 531 SVFKVLAEHQMAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHAD 710
           SVF+VLAE+Q+A+  EEGMP + LYT CRERFLVSSQ+TLNSHLTEF+DHDLVK R+H+D
Sbjct: 293 SVFRVLAEYQLANEKEEGMPVSSLYTKCRERFLVSSQVTLNSHLTEFKDHDLVKIRKHSD 352

Query: 711 GQDCLYIPLTSEALEKLLQEI 773
           GQDCL+IPL S+ALEKLLQE+
Sbjct: 353 GQDCLHIPLVSDALEKLLQEL 373


>ref|NP_001049192.1| Os03g0184700 [Oryza sativa Japonica Group]
           gi|108706555|gb|ABF94350.1| Origin recognition complex
           subunit 2, putative, expressed [Oryza sativa Japonica
           Group] gi|113547663|dbj|BAF11106.1| Os03g0184700 [Oryza
           sativa Japonica Group] gi|215769125|dbj|BAH01354.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218192219|gb|EEC74646.1| hypothetical protein
           OsI_10291 [Oryza sativa Indica Group]
           gi|222624324|gb|EEE58456.1| hypothetical protein
           OsJ_09689 [Oryza sativa Japonica Group]
          Length = 379

 Score =  245 bits (625), Expect = 1e-62
 Identities = 115/141 (81%), Positives = 129/141 (91%)
 Frame = +3

Query: 351 LVWDKKMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQ 530
           L+WDKKMVHTQF WSWYHVPTFAPYKVEGVF+PLILASGG AQ  KTAL+VLQSLTPNAQ
Sbjct: 238 LLWDKKMVHTQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTMKTALVVLQSLTPNAQ 297

Query: 531 SVFKVLAEHQMAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHAD 710
           SVF+VLAE+Q+AH  EEGM  + LYT CRERFLVSSQ+TLNSHLTEF+DHDLVK R+H+D
Sbjct: 298 SVFRVLAEYQLAHEKEEGMHFSSLYTKCRERFLVSSQVTLNSHLTEFKDHDLVKIRKHSD 357

Query: 711 GQDCLYIPLTSEALEKLLQEI 773
           GQDCL+IPL S+ALEKLLQE+
Sbjct: 358 GQDCLHIPLVSDALEKLLQEL 378


>gb|AFW72565.1| hypothetical protein ZEAMMB73_553492 [Zea mays]
          Length = 514

 Score =  244 bits (623), Expect = 2e-62
 Identities = 114/141 (80%), Positives = 129/141 (91%)
 Frame = +3

Query: 351 LVWDKKMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQ 530
           L+WDKKMVH QF WSWYHVPTFAPYKVEGVF+PLILASGG AQ  KTAL+VLQSLTPNAQ
Sbjct: 373 LLWDKKMVHKQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTTKTALVVLQSLTPNAQ 432

Query: 531 SVFKVLAEHQMAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHAD 710
           SVF+VLAE+Q+A+  EEGMP + LYT CRERFLVSSQ+TLN+HLTEF+DHDLVKTR+H+D
Sbjct: 433 SVFRVLAEYQLANEKEEGMPVSSLYTKCRERFLVSSQVTLNAHLTEFKDHDLVKTRKHSD 492

Query: 711 GQDCLYIPLTSEALEKLLQEI 773
           GQDCL IPL S+ALEKLLQE+
Sbjct: 493 GQDCLRIPLVSDALEKLLQEL 513


Top