BLASTX nr result

ID: Coptis25_contig00011703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011703
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26798.1| unknown [Picea sitchensis] gi|224286069|gb|ACN407...   175   4e-42
gb|AFV60006.1| heterotrimeric guanine nucleotide-binding protein...   174   5e-42
emb|CBI15540.3| unnamed protein product [Vitis vinifera]              165   3e-39
gb|AFK36580.1| unknown [Medicago truncatula]                          165   4e-39
ref|XP_003631071.1| Guanine nucleotide-binding protein subunit b...   165   4e-39

>gb|ABK26798.1| unknown [Picea sitchensis] gi|224286069|gb|ACN40746.1| unknown
           [Picea sitchensis] gi|224286410|gb|ACN40912.1| unknown
           [Picea sitchensis]
          Length = 316

 Score =  175 bits (443), Expect = 4e-42
 Identities = 81/105 (77%), Positives = 91/105 (86%)
 Frame = +1

Query: 22  MGEALALRATLRGHADMVTAISTPIDNSNMFVSSSRDKSLLVWNITAEDSQYATPKRRLT 201
           M EAL LR T+ GH D VTAI+TPIDNS+M VSSSRDKS+L+WN+T E  +Y  P+RRLT
Sbjct: 1   MAEALVLRGTMEGHTDAVTAIATPIDNSDMIVSSSRDKSILLWNLTKEPEKYGVPRRRLT 60

Query: 202 GHSHFIQDVVLSSDSQFALSGSWDSELRLWDLNTGATTRRFVGHT 336
           GHSHF+QDVV+SSD QFALSGSWDSELRLWDLNTG TTRRFVGHT
Sbjct: 61  GHSHFVQDVVISSDGQFALSGSWDSELRLWDLNTGLTTRRFVGHT 105


>gb|AFV60006.1| heterotrimeric guanine nucleotide-binding protein subunit beta
           [Eschscholzia californica]
          Length = 313

 Score =  174 bits (442), Expect = 5e-42
 Identities = 81/105 (77%), Positives = 91/105 (86%)
 Frame = +1

Query: 22  MGEALALRATLRGHADMVTAISTPIDNSNMFVSSSRDKSLLVWNITAEDSQYATPKRRLT 201
           M + L LR TL+GH DMVTAI+TPIDNS+M VSSSRDKS+LVW++T ED  Y  P+RRLT
Sbjct: 1   MSDVLVLRGTLKGHDDMVTAIATPIDNSDMIVSSSRDKSILVWHLTKEDPTYGVPRRRLT 60

Query: 202 GHSHFIQDVVLSSDSQFALSGSWDSELRLWDLNTGATTRRFVGHT 336
           GHSHF+QDVVLSSD QFALSG+WD ELRLWDLNTG TTRRFVGHT
Sbjct: 61  GHSHFVQDVVLSSDGQFALSGAWDGELRLWDLNTGTTTRRFVGHT 105


>emb|CBI15540.3| unnamed protein product [Vitis vinifera]
          Length = 1318

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/106 (70%), Positives = 88/106 (83%)
 Frame = +1

Query: 19   KMGEALALRATLRGHADMVTAISTPIDNSNMFVSSSRDKSLLVWNITAEDSQYATPKRRL 198
            KM E L LR T+R H DMVTAI+TPIDNS+M V+SSRDKS+++W++T +D  Y  P+RRL
Sbjct: 1055 KMAETLVLRGTMRAHTDMVTAIATPIDNSDMIVTSSRDKSIILWHLTKDDKTYGVPRRRL 1114

Query: 199  TGHSHFIQDVVLSSDSQFALSGSWDSELRLWDLNTGATTRRFVGHT 336
            TGHSHF+QDVVLSSD QFALSGSWD ELRLWDL  G + RRFVGHT
Sbjct: 1115 TGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHT 1160


>gb|AFK36580.1| unknown [Medicago truncatula]
          Length = 325

 Score =  165 bits (417), Expect = 4e-39
 Identities = 74/105 (70%), Positives = 88/105 (83%)
 Frame = +1

Query: 22  MGEALALRATLRGHADMVTAISTPIDNSNMFVSSSRDKSLLVWNITAEDSQYATPKRRLT 201
           M E L LR T+R H D+VTAI+TPIDNS+M V++SRDKS+++W++T ED  Y  P+RRLT
Sbjct: 1   MAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLT 60

Query: 202 GHSHFIQDVVLSSDSQFALSGSWDSELRLWDLNTGATTRRFVGHT 336
           GHSHF+QDVVLSSD QFALSGSWD ELRLWDLN G + RRFVGHT
Sbjct: 61  GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGHT 105


>ref|XP_003631071.1| Guanine nucleotide-binding protein subunit beta-like protein
           [Medicago truncatula] gi|355525093|gb|AET05547.1|
           Guanine nucleotide-binding protein subunit beta-like
           protein [Medicago truncatula]
          Length = 325

 Score =  165 bits (417), Expect = 4e-39
 Identities = 74/105 (70%), Positives = 88/105 (83%)
 Frame = +1

Query: 22  MGEALALRATLRGHADMVTAISTPIDNSNMFVSSSRDKSLLVWNITAEDSQYATPKRRLT 201
           M E L LR T+R H D+VTAI+TPIDNS+M V++SRDKS+++W++T ED  Y  P+RRLT
Sbjct: 1   MAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLT 60

Query: 202 GHSHFIQDVVLSSDSQFALSGSWDSELRLWDLNTGATTRRFVGHT 336
           GHSHF+QDVVLSSD QFALSGSWD ELRLWDLN G + RRFVGHT
Sbjct: 61  GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGHT 105


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