BLASTX nr result
ID: Coptis25_contig00011701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011701
(2039 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24160.3| unnamed protein product [Vitis vinifera] 456 e-126
ref|XP_002264188.2| PREDICTED: putative cyclin-B3-1-like [Vitis ... 421 e-115
ref|XP_003530394.1| PREDICTED: putative cyclin-B3-1-like [Glycin... 396 e-107
ref|NP_173083.3| cyclin B3-1 [Arabidopsis thaliana] gi|332191315... 395 e-107
ref|XP_002311288.1| predicted protein [Populus trichocarpa] gi|2... 394 e-107
>emb|CBI24160.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 456 bits (1174), Expect = e-126
Identities = 286/600 (47%), Positives = 377/600 (62%), Gaps = 39/600 (6%)
Frame = -2
Query: 1873 SIG-SKTMKSLPVKKGVCEKDSGDFLKGCAGNSQKSMNKRDSDSSGQVKGGREALADVSN 1697
S+G S T KS+ KG + +S D KG + +K +KR+S R+ALADVSN
Sbjct: 45 SVGTSSTRKSVQFNKGTVQSNSSDS-KGNLKSFEKDKDKRNSSFVR-----RKALADVSN 98
Query: 1696 TKNNLSRTGVSIGSKTIKSQYGKNLSGSRVSVRQSTTTASVVSRKPSNTSAGVPSRKPSM 1517
+ N S T + GSK++ V++ Q T T SRKPS M
Sbjct: 99 VQGNCSTTSMRDGSKSV------------VTLGQGTITVCASSRKPS---------MGKM 137
Query: 1516 GTTNSVHKNCIEGA---YTLKKVGTRDSKLYSESQKTKGLGLESVGFDGRKIIGKPLVPT 1346
GT N +GA T K+ ++ K S +Q TK G ESV + ++ V T
Sbjct: 138 GT------NISQGAGVCNTSKRASAKNLKASSNNQMTKDKGRESVN-NAQRTARLSHVLT 190
Query: 1345 RKSLPAFEKISQIASNGLKDNE----------------KCSDSVRGKSVKFKVGRKVALD 1214
RKSLP +++++ + LK E K S+ +++K K R LD
Sbjct: 191 RKSLPVIRRVNKVDRSDLKLFELFLYFIEIQPTLRTTVKTSNVQTQRTLKSK--RTSVLD 248
Query: 1213 VWKNRASTSFISAKDRSEKL---TLLQGV--------SEGKNVIDTGGLSGKSLKDIATS 1067
S + IS+K++ EKL +L + + ++G+ D + + DI
Sbjct: 249 ---KSISGAAISSKNK-EKLVPSSLPESIGFVGPYQPAQGELPPDGNASTSTNTSDINNR 304
Query: 1066 -SNNRRQSFTSSLLAKS-------EVTRKEKLPNIDDKGNMLDVSEYIEDIYSYYWLMEA 911
++RR+SFT SL+ +S E + EKLP+IDD N L+V+EY+E+IY YYW+ EA
Sbjct: 305 RKSDRRRSFTLSLMTRSKQLEEHGEFRKLEKLPSIDDNCNHLEVAEYVEEIYQYYWVTEA 364
Query: 910 QYPSLSNYMNSQTNLTPKMRGILINWLIEVHSKFGLMQETLFLMVAVFDRFVSVVTIQTN 731
Q PS+ NYM+ Q+++TP+MRGILINWLIEVH KF LMQETL+LMV +FDR++S+V I+ N
Sbjct: 365 QNPSMQNYMSIQSDITPQMRGILINWLIEVHYKFELMQETLYLMVTLFDRYLSLVPIKKN 424
Query: 730 EIQLVGLTALLLASKYEDFWHPKVNELIAITDDSYTRLQMLSMEKLILKKLMFRLNTPTP 551
++QLVGLTALLLASKYEDFWHP+V +LI+I+ +SYTR QML MEK++L KL FRLN PTP
Sbjct: 425 DMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKVVLNKLKFRLNVPTP 484
Query: 550 YVFMLRFLKAAQSDKKLEHLAFYLIELCLTEYEALKFRSSLLCASAIYVARCTLQMSPAW 371
YVFM+RFLKAAQSDK+LEHLAFYLIELCL EYEALK++ SLLCASAIY+ARCTLQ +PAW
Sbjct: 485 YVFMMRFLKAAQSDKRLEHLAFYLIELCLVEYEALKYKPSLLCASAIYLARCTLQRAPAW 544
Query: 370 TPLLCKHAHYEESELRDCAEMILRFHKASSKGPLKVTYGKYICESYLCVAKIKALDRLPQ 191
TPLL KHA YEES++RDCAEMIL+F KA+ G LKVTY KY+ VA I L+RLP+
Sbjct: 545 TPLLHKHARYEESQIRDCAEMILKFQKAARTGQLKVTYEKYMRPDQSGVAAITPLNRLPR 604
>ref|XP_002264188.2| PREDICTED: putative cyclin-B3-1-like [Vitis vinifera]
Length = 673
Score = 421 bits (1083), Expect = e-115
Identities = 272/641 (42%), Positives = 369/641 (57%), Gaps = 80/641 (12%)
Frame = -2
Query: 1873 SIG-SKTMKSLPVKKGVCEKDSGDFLKGCAGNSQKSMNKRDSDSSGQVKGGREALADVSN 1697
S+G S T KS+ KG + +S D KG + +K +KR+S R+ALADVSN
Sbjct: 45 SVGTSSTRKSVQFNKGTVQSNSSDS-KGNLKSFEKDKDKRNSSFVR-----RKALADVSN 98
Query: 1696 TKNNLSRTGVSIGSKTIKS------------------QYGKNLSGS----RVSVRQSTTT 1583
+ N S T + GSK++ + + G N+S S R S
Sbjct: 99 VQGNCSTTSMRDGSKSVVTLGQGTITVCASSRKPSMGKMGTNISQGAGVCNTSKRASAKN 158
Query: 1582 ASVVSRKPSNTSAGVPSRKPSMGTTNSVHKNCIEGAYTLKKVGTRDSKLYSESQKTKGLG 1403
S G S + T H + +++V D E+ +T G
Sbjct: 159 LKASSNNQMTKDKGRESVNNAQRTARLSHVLTRKSLPVIRRVNKVDRSDLKENVETSEQG 218
Query: 1402 LESVGFDGRKIIGKPLVPTRKS---------------LPAFEKISQIASNG--------- 1295
F + G+ ++P ++ L A + + + ++
Sbjct: 219 KGKSSFLVKTKAGEKVIPQVRNTRTNLLRNRASDGFILMASRRQTNVDAHAIPKRPIRFQ 278
Query: 1294 --------------LKDNEKCSDSVRGKSVKFKVGRKVALDVWKNRASTSFISAKDRSEK 1157
L+ K S+ +++K K R LD S + IS+K++ EK
Sbjct: 279 LFELFLYFIEIQPTLRTTVKTSNVQTQRTLKSK--RTSVLD---KSISGAAISSKNK-EK 332
Query: 1156 L---TLLQGV--------SEGKNVIDTGGLSGKSLKDIATS-SNNRRQSFTSSLLAKS-- 1019
L +L + + ++G+ D + + DI ++RR+SFT SL+ +S
Sbjct: 333 LVPSSLPESIGFVGPYQPAQGELPPDGNASTSTNTSDINNRRKSDRRRSFTLSLMTRSKQ 392
Query: 1018 -----EVTRKEKLPNIDDKGNMLDVSEYIEDIYSYYWLMEAQYPSLSNYMNSQTNLTPKM 854
E + EKLP+IDD N L+V+EY+E+IY YYW+ EAQ PS+ NYM+ Q+++TP+M
Sbjct: 393 LEEHGEFRKLEKLPSIDDNCNHLEVAEYVEEIYQYYWVTEAQNPSMQNYMSIQSDITPQM 452
Query: 853 RGILINWLIEVHSKFGLMQETLFLMVAVFDRFVSVVTIQTNEIQLVGLTALLLASKYEDF 674
RGILINWLIEVH KF LMQETL+LMV +FDR++S+V I+ N++QLVGLTALLLASKYEDF
Sbjct: 453 RGILINWLIEVHYKFELMQETLYLMVTLFDRYLSLVPIKKNDMQLVGLTALLLASKYEDF 512
Query: 673 WHPKVNELIAITDDSYTRLQMLSMEKLILKKLMFRLNTPTPYVFMLRFLKAAQSDKKLEH 494
WHP+V +LI+I+ +SYTR QML MEK++L KL FRLN PTPYVFM+RFLKAAQSDK+LEH
Sbjct: 513 WHPRVKDLISISAESYTRDQMLGMEKVVLNKLKFRLNVPTPYVFMMRFLKAAQSDKRLEH 572
Query: 493 LAFYLIELCLTEYEALKFRSSLLCASAIYVARCTLQMSPAWTPLLCKHAHYEESELRDCA 314
LAFYLIELCL EYEALK++ SLLCASAIY+ARCTLQ +PAWTPLL KHA YEES++RDCA
Sbjct: 573 LAFYLIELCLVEYEALKYKPSLLCASAIYLARCTLQRAPAWTPLLHKHARYEESQIRDCA 632
Query: 313 EMILRFHKASSKGPLKVTYGKYICESYLCVAKIKALDRLPQ 191
EMIL+F KA+ G LKVTY KY+ VA I L+RLP+
Sbjct: 633 EMILKFQKAARTGQLKVTYEKYMRPDQSGVAAITPLNRLPR 673
>ref|XP_003530394.1| PREDICTED: putative cyclin-B3-1-like [Glycine max]
Length = 562
Score = 396 bits (1017), Expect = e-107
Identities = 239/548 (43%), Positives = 327/548 (59%), Gaps = 19/548 (3%)
Frame = -2
Query: 1780 SQKSMNKRDSDSSGQVKGGREALADVSNTKNNLSRTGVSIGSKTIKSQYGKNLSGSRVSV 1601
++KS+ + D+ + K V+ TK+ +R ++ S
Sbjct: 31 TRKSVVQLDALNRDDQKNNTNGGQSVNATKDRFTRKPIATSSS----------------- 73
Query: 1600 RQSTTTASVVSRKP-SNTSAGVPSRKPSMGTTNSVHKNCIEGAYTLKKVGTRDSKLYSES 1424
R+S VSR+ SNT V S + + G + G T RDS S
Sbjct: 74 RKSLPVLRRVSREDTSNTKENVRSSQTAKGQS---------GLPTKATTNRRDSSQLINS 124
Query: 1423 QKTKGLGLESVGFDGRKIIGKPLVPTRKSLPAFEKIS---QIASNGLKDNEKCSDSVRGK 1253
+ S GF +RKS K + A LK + S + + +
Sbjct: 125 RSHLWKYRVSDGFVQMVQPNVLHASSRKSTKPIVKTTIKAVTAQRTLKSKSRLSQN-KLE 183
Query: 1252 SVKFKVGRKVALDVWKNRASTSFISAKDRS--------EKLTLLQGVSEGKNVIDTGGLS 1097
S + +L KN ST+ S++D+ + LT+ ++ L+
Sbjct: 184 STTATSSQNKSLSAQKNLESTTVTSSQDKESVSLSLPEKSLTVSDDTNQSCLPSGESNLT 243
Query: 1096 GKSLKDIATSSNNRRQSFTSSLLAKSEVTRK-------EKLPNIDDKGNMLDVSEYIEDI 938
L+ I + RR+S+T+SL+ S++ ++ + LPNID++ N L+VSEYI+DI
Sbjct: 244 TNLLELIPRKKSFRRKSYTTSLIEGSKILKESGDVREQDNLPNIDNECNQLEVSEYIDDI 303
Query: 937 YSYYWLMEAQYPSLSNYMNSQTNLTPKMRGILINWLIEVHSKFGLMQETLFLMVAVFDRF 758
Y YYW+ EA P L+NYM+ QT+++P +RGILINWLIEVH KF LM ETL+L V + D++
Sbjct: 304 YLYYWVTEAHNPLLANYMSIQTDISPHLRGILINWLIEVHFKFDLMPETLYLTVTLLDQY 363
Query: 757 VSVVTIQTNEIQLVGLTALLLASKYEDFWHPKVNELIAITDDSYTRLQMLSMEKLILKKL 578
+S+VTI+ ++QLVGLTALLLASKYEDFWHP+V +LI+I+ +SYTR QML MEKLIL+KL
Sbjct: 364 LSLVTIKKTDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKLILRKL 423
Query: 577 MFRLNTPTPYVFMLRFLKAAQSDKKLEHLAFYLIELCLTEYEALKFRSSLLCASAIYVAR 398
FRLN PTPYVFM+RFLKAAQSDKKLEH+AF+L++LCL EYEAL F+ SLLCASA+YVAR
Sbjct: 424 KFRLNAPTPYVFMVRFLKAAQSDKKLEHMAFFLVDLCLVEYEALAFKPSLLCASALYVAR 483
Query: 397 CTLQMSPAWTPLLCKHAHYEESELRDCAEMILRFHKASSKGPLKVTYGKYICESYLCVAK 218
CTLQ++P WTPLL KHA YE S++RDCA+MIL+FHKA+ G LKV Y KY + VA
Sbjct: 484 CTLQITPPWTPLLHKHARYEVSQIRDCADMILKFHKAAGVGKLKVIYEKYSRQELSRVAA 543
Query: 217 IKALDRLP 194
+K LD+LP
Sbjct: 544 VKPLDKLP 551
>ref|NP_173083.3| cyclin B3-1 [Arabidopsis thaliana] gi|332191315|gb|AEE29436.1| cyclin
B3-1 [Arabidopsis thaliana]
Length = 648
Score = 395 bits (1015), Expect = e-107
Identities = 253/591 (42%), Positives = 336/591 (56%), Gaps = 59/591 (9%)
Frame = -2
Query: 1789 AGNSQKSMNKRDSDSSGQVKGG-----------REALADVSNTKNNLSRTGVSIGSKTIK 1643
A ++ +M K +S +G+ K R+ALAD+SN N R GS T+K
Sbjct: 63 ATSNTNNMKKENSRITGKGKSSIENWEEYTKVTRKALADLSNLGGNTLRIPTLCGSSTMK 122
Query: 1642 SQYGKNLSGSRVSVRQSTTTASVVSRKPSNTSAGVPSRKPSMGTTN-------------- 1505
+ K + RVSV T A+ +S K S T V R +G N
Sbjct: 123 WKGVKMANPKRVSV--GPTRANNISVKKS-TKENVSKRTTELGNNNLYKTGQKFIKNKTL 179
Query: 1504 ---SVHKNCIEGAYTLKKVGTRDSKLYSESQKTKGLGLESVGFDGRKIIGKPLVPTRKSL 1334
S + TLK+ D L + GL + +G VP S
Sbjct: 180 SLGSTAGGTRKSLPTLKRTSLTDKSL--KKFNVSGLNSKQLGQGLASKASNQAVPQLSSA 237
Query: 1333 PAFE-----KISQIASNGLKDNEKCSDSVRGKSVKFKVGRKVALD---------VWKNRA 1196
+ + I S+G K ++ VR KS+K + K +L V ++++
Sbjct: 238 GTYTWKTRTSVGSIQSDGNKQSKNNVRFVR-KSIKIQTTVKTSLQNRSSLKKPPVGRSKS 296
Query: 1195 -STSFISAKDRSEKLTLLQGVSEGKNVIDTGGLSGKS---------LKDIATSSNNRRQS 1046
S S I + + L+L + V DT G S S L A + RR+S
Sbjct: 297 RSISSIPSSAVASTLSLPEKVETKCLEEDTQGESSSSGNKDPTTKVLDVTAKPKSKRRKS 356
Query: 1045 FTSSLLAKS-------EVTRKEKLPNIDDKGNMLDVSEYIEDIYSYYWLMEAQYPSLSNY 887
FTS L+ S E T EKLP+IDD+ N L+V+EY++DIY +YW EA P+L +Y
Sbjct: 357 FTSLLVNGSKFDEKNGETTEPEKLPSIDDESNQLEVAEYVDDIYQFYWTAEALNPALGHY 416
Query: 886 MNSQTNLTPKMRGILINWLIEVHSKFGLMQETLFLMVAVFDRFVSVVTIQTNEIQLVGLT 707
+++ ++P RGILINWLIEVH KF LM ETL+L + + DR++S V I NE+QL+GLT
Sbjct: 417 LSAHAEVSPVTRGILINWLIEVHFKFDLMHETLYLTMDLLDRYLSQVPIHKNEMQLIGLT 476
Query: 706 ALLLASKYEDFWHPKVNELIAITDDSYTRLQMLSMEKLILKKLMFRLNTPTPYVFMLRFL 527
ALLLASKYED+WHP++ +LI+I+ +SYTR Q+L ME+ +LK+L FRLN PTPYVFMLRFL
Sbjct: 477 ALLLASKYEDYWHPRIKDLISISAESYTREQILGMERSMLKQLKFRLNAPTPYVFMLRFL 536
Query: 526 KAAQSDKKLEHLAFYLIELCLTEYEALKFRSSLLCASAIYVARCTLQMSPAWTPLLCKHA 347
KAAQS+KKLE LAFYLIELCL EYEALK++ SLLCASAIYVARCTL M+P WT LL H
Sbjct: 537 KAAQSNKKLEQLAFYLIELCLVEYEALKYKPSLLCASAIYVARCTLHMTPVWTSLLNNHT 596
Query: 346 HYEESELRDCAEMILRFHKASSKGPLKVTYGKYICESYLCVAKIKALDRLP 194
HY S+++DC++MILRFHKA+ G L+VTY KYI VA +K LD+LP
Sbjct: 597 HYNVSQMKDCSDMILRFHKAAKTGNLRVTYEKYINPDRSNVAVLKPLDKLP 647
>ref|XP_002311288.1| predicted protein [Populus trichocarpa] gi|222851108|gb|EEE88655.1|
predicted protein [Populus trichocarpa]
Length = 333
Score = 394 bits (1012), Expect = e-107
Identities = 200/330 (60%), Positives = 249/330 (75%), Gaps = 9/330 (2%)
Frame = -2
Query: 1156 LTLLQGVSEGKNVIDTGGLSGKSLKD--IATSSNNRRQSFTSSLLAKS-------EVTRK 1004
L + V++G+ D +S + K I ++RR+S+TS L+ +S EV +
Sbjct: 3 LVIANEVTQGEPSSDNNKMSSANHKSDVITIGKSSRRRSYTSLLMTRSKLLEEHGEVIEQ 62
Query: 1003 EKLPNIDDKGNMLDVSEYIEDIYSYYWLMEAQYPSLSNYMNSQTNLTPKMRGILINWLIE 824
EKLP+IDD N L+V+EY++ IY YYW++E Q SL NYM QT++TP+MRGI+INWLIE
Sbjct: 63 EKLPSIDDTSNQLEVAEYVDAIYKYYWILEVQNSSLENYMAIQTDITPQMRGIVINWLIE 122
Query: 823 VHSKFGLMQETLFLMVAVFDRFVSVVTIQTNEIQLVGLTALLLASKYEDFWHPKVNELIA 644
VH KF LM ETL+LMV + DR++S I+ NE+QLVGLTAL LASKYEDFWHP++ +LI+
Sbjct: 123 VHFKFELMPETLYLMVTLLDRYLSQAQIKKNELQLVGLTALFLASKYEDFWHPRIKDLIS 182
Query: 643 ITDDSYTRLQMLSMEKLILKKLMFRLNTPTPYVFMLRFLKAAQSDKKLEHLAFYLIELCL 464
I+ +SY+R QML MEKL+LKKL FRLN PTPYVFMLRFLKAAQS+ KLEHLAFYLIELCL
Sbjct: 183 ISAESYSRDQMLLMEKLLLKKLKFRLNEPTPYVFMLRFLKAAQSEMKLEHLAFYLIELCL 242
Query: 463 TEYEALKFRSSLLCASAIYVARCTLQMSPAWTPLLCKHAHYEESELRDCAEMILRFHKAS 284
EY+ALKF+ S+LCASAIYVAR TLQM PAWTPLL +HAHY+ S++RDCAEMILRF KA+
Sbjct: 243 VEYKALKFKPSMLCASAIYVARSTLQMVPAWTPLLARHAHYQVSQMRDCAEMILRFQKAA 302
Query: 283 SKGPLKVTYGKYICESYLCVAKIKALDRLP 194
L+VTY KY+ VA IK L LP
Sbjct: 303 RTSQLRVTYEKYMRPDLSGVAAIKPLSELP 332