BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011677
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]   105   4e-21
emb|CBI33773.3| unnamed protein product [Vitis vinifera]              104   1e-20
ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]           104   1e-20
ref|XP_002524919.1| cyclin d, putative [Ricinus communis] gi|223...    98   1e-18
ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]       94   2e-17

>emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]
          Length = 372

 Score =  105 bits (263), Expect = 4e-21
 Identities = 56/100 (56%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
 Frame = +1

Query: 4   ILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFLSIPSSPNGVIDVSFSCEXXXXXX 177
           +LKISK+ V+DCY+LIL+  L  +GH  N   KRK LS+PSSP+G+ D  FSC+      
Sbjct: 273 VLKISKBDVDDCYKLILE-FLGXHGHTQNQTHKRKHLSLPSSPSGIFDAPFSCDSSSDSW 331

Query: 178 XXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVLSTP 297
                     +PLFKKSRAQDQQMRLPS NRV VDVLS+P
Sbjct: 332 AMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVLSSP 371


>emb|CBI33773.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  104 bits (259), Expect = 1e-20
 Identities = 56/100 (56%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
 Frame = +1

Query: 4   ILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFLSIPSSPNGVIDVSFSCEXXXXXX 177
           +LKISK+ V+DCY+LIL+  L  +GH  N   KRK LS+PSSP+G+ D  FSC+      
Sbjct: 210 VLKISKNDVDDCYKLILE-FLGSHGHTQNQTHKRKHLSLPSSPSGIFDAPFSCDSSSDSW 268

Query: 178 XXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVLSTP 297
                     +PLFKKSRAQDQQMRLPS NRV VDVLS+P
Sbjct: 269 AMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVLSSP 308


>ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]
          Length = 372

 Score =  104 bits (259), Expect = 1e-20
 Identities = 56/100 (56%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
 Frame = +1

Query: 4   ILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFLSIPSSPNGVIDVSFSCEXXXXXX 177
           +LKISK+ V+DCY+LIL+  L  +GH  N   KRK LS+PSSP+G+ D  FSC+      
Sbjct: 273 VLKISKNDVDDCYKLILE-FLGSHGHTQNQTHKRKHLSLPSSPSGIFDAPFSCDSSSDSW 331

Query: 178 XXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVLSTP 297
                     +PLFKKSRAQDQQMRLPS NRV VDVLS+P
Sbjct: 332 AMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVLSSP 371


>ref|XP_002524919.1| cyclin d, putative [Ricinus communis] gi|223535754|gb|EEF37416.1|
           cyclin d, putative [Ricinus communis]
          Length = 276

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 52/98 (53%), Positives = 68/98 (69%)
 Frame = +1

Query: 4   ILKISKDRVNDCYQLILDSVLSYNGHVYNSKRKFLSIPSSPNGVIDVSFSCEXXXXXXXX 183
           ++KIS+++VN+CY+LIL+  LS N +  + KRK  S+P SPNG+ID  FSC+        
Sbjct: 181 VIKISENKVNECYKLILE--LSGNQNK-SCKRKHPSMPRSPNGIIDAYFSCDSSNDSWNL 237

Query: 184 XXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVLSTP 297
                  P PLFK+SR QDQQMRLPS NR+FVDVLS+P
Sbjct: 238 SSTVSSSPVPLFKRSRTQDQQMRLPSLNRMFVDVLSSP 275


>ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
          Length = 386

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 52/104 (50%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
 Frame = +1

Query: 4   ILKISKDRVNDCYQLILDSVLSYNGHVYNS----KRKFLSIPSSPNGVIDVSFSCEXXXX 171
           ILKI KD+V +C+QLI++     N H Y      KRK+  IP SPNGV+D  FSC+    
Sbjct: 285 ILKIDKDKVTECHQLIVEVS---NTHFYAQNNPHKRKYTKIPGSPNGVMDAYFSCDSSND 341

Query: 172 XXXXXXXXXXXP-EPLFKKSRAQDQQMRLPSFNRVFVDVLSTPP 300
                      P +PLFKKSR Q+QQMRLPS NRVFVDV+ + P
Sbjct: 342 SWAVESSVSSSPVDPLFKKSRTQEQQMRLPSLNRVFVDVIGSSP 385