BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011676
         (1600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   475   e-131
ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   451   e-124
ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-c...   440   e-121
ref|XP_003580561.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...   405   e-110
tpg|DAA56013.1| TPA: hypothetical protein ZEAMMB73_887805 [Zea m...   401   e-109

>ref|XP_002280127.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6 [Vitis vinifera]
            gi|302142647|emb|CBI19850.3| unnamed protein product
            [Vitis vinifera]
          Length = 464

 Score =  475 bits (1222), Expect = e-131
 Identities = 242/387 (62%), Positives = 283/387 (73%)
 Frame = +2

Query: 32   EVEIKEESKDNRALVDNNSAQSLSGQDIDALRRQGATGDQIVEALIANSSTFEKKTLFSQ 211
            + ++K+E KDNRA+VDNN AQSL+G+DID +RRQGATGD+IVEALI+NS+T+EKKT FSQ
Sbjct: 93   DCQLKDEPKDNRAIVDNNKAQSLTGEDIDEMRRQGATGDEIVEALISNSATYEKKTSFSQ 152

Query: 212  EKYRIRKQKKYAPRVLLRRPFARSICEAYFKKYPARIGYLRMDTLSLLLSMANVSPYSDV 391
            EKYR++KQKKY+PRVLLRRPF RSICEAYFKKYPARIG+LR+DTLSLLLSMAN++ +SDV
Sbjct: 153  EKYRLKKQKKYSPRVLLRRPFCRSICEAYFKKYPARIGFLRVDTLSLLLSMANIAAHSDV 212

Query: 392  LVVDMVGGILTGAVAERLGGTGYVCNTYFGVTQYPMDIVRXXXXXXXXCSSIVRSPFSDL 571
            LVVDMVGG+LTGAVAERLGGTGYVCN Y G T YPMDIVR        C  IVRSP   L
Sbjct: 213  LVVDMVGGLLTGAVAERLGGTGYVCNAYLGDTPYPMDIVRIFNFSSEICKRIVRSPVDGL 272

Query: 572  CLAASNNVEHFGXXXXXXXXXXXXGDESSSPSLFKLEAVVIQNQVSSPSCLHSVSNAHPS 751
                    E F              ++ SS   F                 HS+S    +
Sbjct: 273  RSIQDGTSEQFFQHKGVSNSEIQSNEQMSSQDSFP----------------HSISTEETT 316

Query: 752  FLSGNENLGPAPTTFMDETDSSSVSRVCKPTKSGEKATQEVINLWKASGFSSLIIAAPEL 931
              S N  L   P   M       V++ CK TK+GE A+ + INLWK +GFSSL+IAAPEL
Sbjct: 317  LSSENGMLDLIPQ--MVTASPPQVAKTCKATKAGENASLDAINLWKENGFSSLLIAAPEL 374

Query: 932  DAWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHNLQVAKLAIGLQISEPWLREYQVLPS 1111
            D WS +Q+ LP LSYSA FA+YHQYLQPL TCMHNLQ+ K+AIGLQISEPWLREYQVLPS
Sbjct: 375  DVWSIVQEFLPFLSYSASFAIYHQYLQPLATCMHNLQLGKMAIGLQISEPWLREYQVLPS 434

Query: 1112 RTHPCMQMSAFGGYILSGIKICSTEAQ 1192
            RTHPCMQMSAFGGYILSG +ICS+++Q
Sbjct: 435  RTHPCMQMSAFGGYILSGTRICSSDSQ 461


>ref|XP_003549460.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6-like [Glycine max]
          Length = 440

 Score =  451 bits (1160), Expect = e-124
 Identities = 234/381 (61%), Positives = 288/381 (75%), Gaps = 2/381 (0%)
 Frame = +2

Query: 50   ESKDNRALVDNNSAQSLSGQDIDALRRQGATGDQIVEALIANSSTFEKKTLFSQEKYRIR 229
            +S+DNRALVDNN+AQSL+G+DI+A+RRQGA G++I+EALIANS+TFEKKT FSQEKYR++
Sbjct: 91   DSRDNRALVDNNTAQSLTGEDIEAMRRQGAGGNEIIEALIANSATFEKKTSFSQEKYRLK 150

Query: 230  KQKKYAPRVLLRRPFARSICEAYFKKYPARIGYLRMDTLSLLLSMANVSPYSDVLVVDMV 409
            KQKKYAP+VL+RRP ARSICEAYFKKYP++IG+LR+DTLSLLLSM NVS  SD+LVVDMV
Sbjct: 151  KQKKYAPKVLMRRPVARSICEAYFKKYPSKIGFLRVDTLSLLLSMGNVSSNSDILVVDMV 210

Query: 410  GGILTGAVAERLGGTGYVCNTYFGVTQYPMDIVRXXXXXXXXCSSIVRSPFSDLCLAASN 589
            GG+LTGAVAERLGGTG+VCN+Y G   Y MDIVR        C  IVRSP SDL L+   
Sbjct: 211  GGLLTGAVAERLGGTGFVCNSYIGQAPYSMDIVRIFNLSDEICKRIVRSPISDL-LSQKE 269

Query: 590  NVEHFGXXXXXXXXXXXXGDESSSPSLFKLEAVVIQNQVSSPSCLHSVSNAHPSFLS--G 763
            + E                 ++  P         +Q+Q+S+ + +  +S++  + +S  G
Sbjct: 270  SPE-----------------QTLQPDDACNVESHVQDQISASTSMEDISHSSENGISDLG 312

Query: 764  NENLGPAPTTFMDETDSSSVSRVCKPTKSGEKATQEVINLWKASGFSSLIIAAPELDAWS 943
             EN  PA               V K  K+GE+A +E+I+LWK +GFSSLIIAAPELD W+
Sbjct: 313  AENTEPA-------------KEVWKAPKAGERAQKEIIDLWKENGFSSLIIAAPELDTWT 359

Query: 944  TLQDLLPLLSYSAPFAVYHQYLQPLTTCMHNLQVAKLAIGLQISEPWLREYQVLPSRTHP 1123
             ++D+LPLL+ SAPFA+YHQYLQPL TCMHNLQ+ K+AIGLQI+EPWLREYQVLPSRTHP
Sbjct: 360  LVRDILPLLADSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQITEPWLREYQVLPSRTHP 419

Query: 1124 CMQMSAFGGYILSGIKICSTE 1186
            CMQMS+FGGYILSG KICSTE
Sbjct: 420  CMQMSSFGGYILSGTKICSTE 440


>ref|XP_003589467.1| tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit trm6
            [Medicago truncatula] gi|355478515|gb|AES59718.1| tRNA
            (adenine-N(1)-)-methyltransferase non-catalytic subunit
            trm6 [Medicago truncatula]
          Length = 457

 Score =  440 bits (1131), Expect = e-121
 Identities = 233/397 (58%), Positives = 289/397 (72%), Gaps = 6/397 (1%)
 Frame = +2

Query: 11   DVVEGKNEVEIKE-----ESKDNRALVDNNSAQSLSGQDIDALRRQGATGDQIVEALIAN 175
            D+ +G+ + E K+     E +DNR+L+DNN+AQSL+G+DI+ +RRQGA GD+I+EALIAN
Sbjct: 86   DIKDGRFQAESKDGPLTGELRDNRSLIDNNTAQSLTGEDIEDMRRQGAKGDEIIEALIAN 145

Query: 176  SSTFEKKTLFSQEKYRIRKQKKYAPRVLLRRPFARSICEAYFKKYPARIGYLRMDTLSLL 355
            S+TF+KKT FSQEKYR++KQKKYAP+VL+RRP ARSICEAYF K+P +IG+LR+DTLSLL
Sbjct: 146  SATFDKKTSFSQEKYRLKKQKKYAPKVLIRRPVARSICEAYFMKHPLKIGFLRVDTLSLL 205

Query: 356  LSMANVSPYSDVLVVDMVGGILTGAVAERLGGTGYVCNTYFGVTQYPMDIVRXXXXXXXX 535
            LSMANVS  SD+LVVDMVGG+LTGAVAERLGGTG+VCN+Y G     MDIVR        
Sbjct: 206  LSMANVSSNSDILVVDMVGGLLTGAVAERLGGTGFVCNSYLGKAP-SMDIVRIFNLSDEI 264

Query: 536  CSSIVRSPFSDLCLAASNNVEHFGXXXXXXXXXXXXGDESSSPSLFKLEAVVIQNQVSSP 715
            C  IVRS  SDL                          + SS    K +   +++Q+++ 
Sbjct: 265  CKRIVRSSISDL-----------------------LSQKESSQQNPKHDDGSVESQLNNQ 301

Query: 716  SCLH-SVSNAHPSFLSGNENLGPAPTTFMDETDSSSVSRVCKPTKSGEKATQEVINLWKA 892
             C   S+     S  +G  +LG A      E+ +    R CK  K+GEKA+QE+I+ WK 
Sbjct: 302  MCASVSMEEISHSSENGISDLG-ADNAENIESSTFPALRACKAIKAGEKASQEIIDSWKE 360

Query: 893  SGFSSLIIAAPELDAWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHNLQVAKLAIGLQI 1072
            +GFSSLIIAAP+LD W+ ++DLLPLLS SAPFA+YHQYLQPL TCMHNLQ+ K+AIGLQI
Sbjct: 361  NGFSSLIIAAPDLDTWTLIKDLLPLLSNSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQI 420

Query: 1073 SEPWLREYQVLPSRTHPCMQMSAFGGYILSGIKICST 1183
            +EPWLREYQVLPSRTHPCMQMSAFGGYILSG KICS+
Sbjct: 421  TEPWLREYQVLPSRTHPCMQMSAFGGYILSGTKICSS 457


>ref|XP_003580561.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase non-catalytic
            subunit trm6-like [Brachypodium distachyon]
          Length = 475

 Score =  405 bits (1040), Expect = e-110
 Identities = 216/393 (54%), Positives = 269/393 (68%), Gaps = 2/393 (0%)
 Frame = +2

Query: 38   EIKEESKDNRALVDNNSAQSLSGQDIDALRRQGATGDQIVEALIANSSTFEKKTLFSQEK 217
            ++++E++DNR+LVDNN+AQ+LS +DI+A++R GA+GD IVEALIANSSTF  KT+FSQEK
Sbjct: 89   QVQDETRDNRSLVDNNTAQNLSSEDIEAMKRDGASGDAIVEALIANSSTFGNKTVFSQEK 148

Query: 218  YRIRKQKKYAPRVLLRRPFARSICEAYFKKYPARIGYLRMDTLSLLLSMANVSPYSDVLV 397
            Y+++KQKKYAP+VLLRRP  RSICE YFKKYPARIG++R+D LSLLLSMANV  YSDVLV
Sbjct: 149  YKLKKQKKYAPKVLLRRPSTRSICETYFKKYPARIGFMRVDALSLLLSMANVGAYSDVLV 208

Query: 398  VDMVGGILTGAVAERLGGTGYVCNTYFGVTQYPMDIVRXXXXXXXXCSSIVRSPFSDLCL 577
            VD+VGG++ GAVAERLGGTGYVCNTY G     +DI+R         S I ++  SD+C 
Sbjct: 209  VDIVGGLVVGAVAERLGGTGYVCNTYLGSAPSNIDIIRMYNLSSDMNSRIFQASLSDVCS 268

Query: 578  AASNNVEHFGXXXXXXXXXXXXGDESSSPSL-FKLEAVVIQNQVSSPSCLH-SVSNAHPS 751
              ++     G             DES   SL   ++A V      S       +    PS
Sbjct: 269  LQNSGTVLNGNIQGEVVEPSAVSDESPQSSLALPVDAAVSDGNAQSTGVQPIKIEVPEPS 328

Query: 752  FLSGNENLGPAPTTFMDETDSSSVSRVCKPTKSGEKATQEVINLWKASGFSSLIIAAPEL 931
                +ENL     +  D   +   S   KP K+G   + E +  W+  GFSSLI+AAP  
Sbjct: 329  M---DENLNQDDNSLSDCKGNDDTSIASKPVKAGRAPSPEKMKYWEEHGFSSLIVAAPGH 385

Query: 932  DAWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHNLQVAKLAIGLQISEPWLREYQVLPS 1111
            +  S + DLLPLLSYSAPFA+YHQ+LQPL  CMH+LQV+K AIGLQI+EPWLRE+QVLPS
Sbjct: 386  EVESLVADLLPLLSYSAPFAIYHQHLQPLAICMHSLQVSKSAIGLQITEPWLREFQVLPS 445

Query: 1112 RTHPCMQMSAFGGYILSGIKICSTEAQQKPE*C 1210
            RTHP MQMS FGGYILSGI+I      QKP+ C
Sbjct: 446  RTHPHMQMSGFGGYILSGIRI------QKPDPC 472


>tpg|DAA56013.1| TPA: hypothetical protein ZEAMMB73_887805 [Zea mays]
          Length = 477

 Score =  401 bits (1031), Expect = e-109
 Identities = 210/380 (55%), Positives = 269/380 (70%), Gaps = 1/380 (0%)
 Frame = +2

Query: 38   EIKEESKDNRALVDNNSAQSLSGQDIDALRRQGATGDQIVEALIANSSTFEKKTLFSQEK 217
            + ++E++DNR+LVDNN+AQ+LS  DI+A++R GATGD+IVEALIANSSTF  KT+FSQEK
Sbjct: 89   QTQDETRDNRSLVDNNTAQNLSSDDIEAMKRDGATGDEIVEALIANSSTFGNKTVFSQEK 148

Query: 218  YRIRKQKKYAPRVLLRRPFARSICEAYFKKYPARIGYLRMDTLSLLLSMANVSPYSDVLV 397
            Y+++KQKKYAP+VLLRRP ARSICE YFKK PARIG++R+DTLSLLLSMAN+  YSDVLV
Sbjct: 149  YKLKKQKKYAPKVLLRRPSARSICETYFKKTPARIGFMRVDTLSLLLSMANIGAYSDVLV 208

Query: 398  VDMVGGILTGAVAERLGGTGYVCNTYFGVTQYPMDIVRXXXXXXXXCSSIVRSPFSDLC- 574
            VDMVGG++ GAVAERLGGTGYVC+TY G     +DI+R         S IV++P S LC 
Sbjct: 209  VDMVGGLVVGAVAERLGGTGYVCSTYLGSAPSSIDIIRMYNLSSDMVSRIVQAPISALCS 268

Query: 575  LAASNNVEHFGXXXXXXXXXXXXGDESSSPSLFKLEAVVIQNQVSSPSCLHSVSNAHPSF 754
            + +S N                  DE +  SL +     + ++ +  S     S+   S 
Sbjct: 269  MQSSGNTPSVVNSSAEGEMIEPAVDEDAQSSLAQQVDTAVPDEKAQLS-TDQPSDMEVSE 327

Query: 755  LSGNENLGPAPTTFMDETDSSSVSRVCKPTKSGEKATQEVINLWKASGFSSLIIAAPELD 934
             S +E+L     + +   DS       KP K G+  + E +  WK  GFSSLI+AAP  +
Sbjct: 328  PSLDEHLVQDENSSLGGKDSDGTLNASKPPKPGKAPSPEKMKYWKEHGFSSLIVAAPGHE 387

Query: 935  AWSTLQDLLPLLSYSAPFAVYHQYLQPLTTCMHNLQVAKLAIGLQISEPWLREYQVLPSR 1114
                + D+LPLLSYSAPFA+YHQ+L+PL  CMH+LQ++K+AIGLQ+SEPWLREYQVLPSR
Sbjct: 388  VERLVADMLPLLSYSAPFAIYHQHLEPLAKCMHSLQLSKMAIGLQLSEPWLREYQVLPSR 447

Query: 1115 THPCMQMSAFGGYILSGIKI 1174
            THP MQM+AFGGYIL+GI+I
Sbjct: 448  THPHMQMNAFGGYILNGIRI 467