BLASTX nr result

ID: Coptis25_contig00011671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011671
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22790.3| unnamed protein product [Vitis vinifera]              233   2e-91
ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 ...   233   2e-91
gb|AFK43500.1| unknown [Medicago truncatula]                          235   1e-90
ref|NP_001239750.1| uncharacterized protein LOC100812311 [Glycin...   234   3e-90
ref|XP_002533899.1| TGF-beta-inducible nuclear protein, putative...   232   3e-90

>emb|CBI22790.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  233 bits (594), Expect(2) = 2e-91
 Identities = 116/152 (76%), Positives = 124/152 (81%)
 Frame = +2

Query: 287 EMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKAHVTHPELKC 466
           EMFKV+RTG+RK+KQWKRMVTK TFVGP+FTRKPPKYERFIRP+GLRF+KAHVTHPELKC
Sbjct: 151 EMFKVLRTGKRKTKQWKRMVTKATFVGPAFTRKPPKYERFIRPSGLRFTKAHVTHPELKC 210

Query: 467 TFNLEIIGIKKNPNGNMYTSLGVVTXXXXXXXXXXXXXXXXXXXXXXXXXXIEVNVSELG 646
           TFNLEIIG+KKNPNG MYTSLGV+T                          IEVNVSELG
Sbjct: 211 TFNLEIIGVKKNPNGQMYTSLGVMT----------------------KGTIIEVNVSELG 248

Query: 647 LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 742
           LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV
Sbjct: 249 LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 280



 Score =  129 bits (324), Expect(2) = 2e-91
 Identities = 62/69 (89%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   EKAQMKRTLAMHEESSSRRKVDDEVHQGALPAYLLDREQTTRAKVLSNSIKQKRKEKAGK 180
           EKAQMK+TLAMHEESSSRRKVDD+VH+GA+PAYLLDRE TTRAKVLSN+IKQKRKEKAGK
Sbjct: 77  EKAQMKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNTIKQKRKEKAGK 136

Query: 181 WDVPLPKVR 207
           W+VPLPKVR
Sbjct: 137 WEVPLPKVR 145


>ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 homolog [Vitis
           vinifera]
          Length = 260

 Score =  233 bits (594), Expect(2) = 2e-91
 Identities = 116/152 (76%), Positives = 124/152 (81%)
 Frame = +2

Query: 287 EMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKAHVTHPELKC 466
           EMFKV+RTG+RK+KQWKRMVTK TFVGP+FTRKPPKYERFIRP+GLRF+KAHVTHPELKC
Sbjct: 131 EMFKVLRTGKRKTKQWKRMVTKATFVGPAFTRKPPKYERFIRPSGLRFTKAHVTHPELKC 190

Query: 467 TFNLEIIGIKKNPNGNMYTSLGVVTXXXXXXXXXXXXXXXXXXXXXXXXXXIEVNVSELG 646
           TFNLEIIG+KKNPNG MYTSLGV+T                          IEVNVSELG
Sbjct: 191 TFNLEIIGVKKNPNGQMYTSLGVMT----------------------KGTIIEVNVSELG 228

Query: 647 LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 742
           LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV
Sbjct: 229 LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260



 Score =  129 bits (324), Expect(2) = 2e-91
 Identities = 62/69 (89%), Positives = 68/69 (98%)
 Frame = +1

Query: 1   EKAQMKRTLAMHEESSSRRKVDDEVHQGALPAYLLDREQTTRAKVLSNSIKQKRKEKAGK 180
           EKAQMK+TLAMHEESSSRRKVDD+VH+GA+PAYLLDRE TTRAKVLSN+IKQKRKEKAGK
Sbjct: 57  EKAQMKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNTIKQKRKEKAGK 116

Query: 181 WDVPLPKVR 207
           W+VPLPKVR
Sbjct: 117 WEVPLPKVR 125


>gb|AFK43500.1| unknown [Medicago truncatula]
          Length = 260

 Score =  235 bits (600), Expect(2) = 1e-90
 Identities = 118/152 (77%), Positives = 123/152 (80%)
 Frame = +2

Query: 287 EMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKAHVTHPELKC 466
           EMFKVVRTG+RK+KQWKRMVTK TFVGP FTRKPPKYERFIRPTGLRF+KAHVTHPELKC
Sbjct: 131 EMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKC 190

Query: 467 TFNLEIIGIKKNPNGNMYTSLGVVTXXXXXXXXXXXXXXXXXXXXXXXXXXIEVNVSELG 646
           TFNLEIIG+KKNPNG MYTSLGV+T                          IEVNVSELG
Sbjct: 191 TFNLEIIGVKKNPNGPMYTSLGVIT----------------------RGSIIEVNVSELG 228

Query: 647 LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 742
           LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV
Sbjct: 229 LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260



 Score =  124 bits (311), Expect(2) = 1e-90
 Identities = 59/69 (85%), Positives = 65/69 (94%)
 Frame = +1

Query: 1   EKAQMKRTLAMHEESSSRRKVDDEVHQGALPAYLLDREQTTRAKVLSNSIKQKRKEKAGK 180
           EKAQMKRTLAMH+ES+SRRK DD V +GA+PAYLLDRE TTRAK+LSN+IKQKRKEKAGK
Sbjct: 57  EKAQMKRTLAMHDESTSRRKADDNVQEGAVPAYLLDRENTTRAKILSNTIKQKRKEKAGK 116

Query: 181 WDVPLPKVR 207
           WDVPLPKVR
Sbjct: 117 WDVPLPKVR 125


>ref|NP_001239750.1| uncharacterized protein LOC100812311 [Glycine max]
           gi|255645233|gb|ACU23114.1| unknown [Glycine max]
          Length = 260

 Score =  234 bits (598), Expect(2) = 3e-90
 Identities = 117/152 (76%), Positives = 123/152 (80%)
 Frame = +2

Query: 287 EMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKAHVTHPELKC 466
           EMFKVVRTG+RK+KQWKRMVTK TFVGP FTRKPPKYERFIRPTGLRF+KAHVTHPELKC
Sbjct: 131 EMFKVVRTGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKC 190

Query: 467 TFNLEIIGIKKNPNGNMYTSLGVVTXXXXXXXXXXXXXXXXXXXXXXXXXXIEVNVSELG 646
           TFNLE+IG+KKNPNG MYTSLGV+T                          IEVNVSELG
Sbjct: 191 TFNLELIGVKKNPNGPMYTSLGVIT----------------------KGTIIEVNVSELG 228

Query: 647 LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 742
           LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV
Sbjct: 229 LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260



 Score =  124 bits (310), Expect(2) = 3e-90
 Identities = 60/69 (86%), Positives = 64/69 (92%)
 Frame = +1

Query: 1   EKAQMKRTLAMHEESSSRRKVDDEVHQGALPAYLLDREQTTRAKVLSNSIKQKRKEKAGK 180
           EKAQMK+TLAMHEESSSRRK DD V  GA+PAYLLDR+ TTRAKVLSN+IKQKRKEKAGK
Sbjct: 57  EKAQMKKTLAMHEESSSRRKTDDNVQDGAVPAYLLDRDNTTRAKVLSNTIKQKRKEKAGK 116

Query: 181 WDVPLPKVR 207
           WDVPLPKVR
Sbjct: 117 WDVPLPKVR 125


>ref|XP_002533899.1| TGF-beta-inducible nuclear protein, putative [Ricinus communis]
           gi|223526141|gb|EEF28481.1| TGF-beta-inducible nuclear
           protein, putative [Ricinus communis]
          Length = 260

 Score =  232 bits (592), Expect(2) = 3e-90
 Identities = 115/152 (75%), Positives = 124/152 (81%)
 Frame = +2

Query: 287 EMFKVVRTGQRKSKQWKRMVTKVTFVGPSFTRKPPKYERFIRPTGLRFSKAHVTHPELKC 466
           EMFKV+R+G+R++KQWKRMVTKVTFVGP FTRKPPKYERFIRP+GLRF+KAHVTHPELKC
Sbjct: 131 EMFKVIRSGKRRTKQWKRMVTKVTFVGPGFTRKPPKYERFIRPSGLRFTKAHVTHPELKC 190

Query: 467 TFNLEIIGIKKNPNGNMYTSLGVVTXXXXXXXXXXXXXXXXXXXXXXXXXXIEVNVSELG 646
           TFNLEIIG+KKNPNG MYTSLGV+T                          IEVNVSELG
Sbjct: 191 TFNLEIIGVKKNPNGPMYTSLGVIT----------------------KGSIIEVNVSELG 228

Query: 647 LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 742
           LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV
Sbjct: 229 LVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260



 Score =  126 bits (316), Expect(2) = 3e-90
 Identities = 59/69 (85%), Positives = 67/69 (97%)
 Frame = +1

Query: 1   EKAQMKRTLAMHEESSSRRKVDDEVHQGALPAYLLDREQTTRAKVLSNSIKQKRKEKAGK 180
           EKA MK+TLAMHEESSSRRKVDD+VH+GA+PAYLLDRE TTRAK+LSN++KQKRKEKAGK
Sbjct: 57  EKALMKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRENTTRAKILSNTVKQKRKEKAGK 116

Query: 181 WDVPLPKVR 207
           W+VPLPKVR
Sbjct: 117 WEVPLPKVR 125


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