BLASTX nr result

ID: Coptis25_contig00011668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011668
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532536.1| phospho-n-acetylmuramoyl-pentapeptide-transf...    83   2e-14
ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...    79   3e-13
ref|XP_002316728.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...    71   8e-11
ref|XP_002981888.1| hypothetical protein SELMODRAFT_115433 [Sela...    64   2e-08

>ref|XP_002532536.1| phospho-n-acetylmuramoyl-pentapeptide-transferase, putative
           [Ricinus communis] gi|223527748|gb|EEF29852.1|
           phospho-n-acetylmuramoyl-pentapeptide-transferase,
           putative [Ricinus communis]
          Length = 503

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/49 (79%), Positives = 41/49 (83%)
 Frame = -2

Query: 224 GVGLRLFRMAPLHHHFELCGFKEPHIVACTYVVSCILAIYAGYVGLISA 78
           GVG RLFRMAP HHH ELCGFKEP IVA  YV SC+LA+ AGYVGLISA
Sbjct: 455 GVGHRLFRMAPFHHHLELCGFKEPIIVAGAYVASCLLALVAGYVGLISA 503


>ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Vitis vinifera]
          Length = 545

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/49 (75%), Positives = 39/49 (79%)
 Frame = -2

Query: 224 GVGLRLFRMAPLHHHFELCGFKEPHIVACTYVVSCILAIYAGYVGLISA 78
           G G RLFRMAP HHH ELCG KEP IVA  YV+SC LA+ AGYVGLISA
Sbjct: 497 GAGRRLFRMAPFHHHLELCGLKEPIIVAGAYVISCWLAVVAGYVGLISA 545


>ref|XP_002316728.1| predicted protein [Populus trichocarpa] gi|222859793|gb|EEE97340.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/49 (73%), Positives = 41/49 (83%)
 Frame = -2

Query: 224 GVGLRLFRMAPLHHHFELCGFKEPHIVACTYVVSCILAIYAGYVGLISA 78
           G G RLFRMAP+HHH ELCG KEP IVA  YV+S +LA++AGYVGLISA
Sbjct: 277 GDGCRLFRMAPIHHHLELCGLKEPVIVAGAYVISGVLALFAGYVGLISA 325


>ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Cucumis sativus]
           gi|449527335|ref|XP_004170667.1| PREDICTED:
           phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Cucumis sativus]
          Length = 521

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/49 (65%), Positives = 36/49 (73%)
 Frame = -2

Query: 224 GVGLRLFRMAPLHHHFELCGFKEPHIVACTYVVSCILAIYAGYVGLISA 78
           G G  +F+M P HHH ELCG KEP IVA  Y +S ILA+ AGYVGLISA
Sbjct: 473 GAGRHIFQMVPFHHHLELCGIKEPFIVAGAYTISSILALLAGYVGLISA 521


>ref|XP_002981888.1| hypothetical protein SELMODRAFT_115433 [Selaginella moellendorffii]
           gi|300150330|gb|EFJ16981.1| hypothetical protein
           SELMODRAFT_115433 [Selaginella moellendorffii]
          Length = 325

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = -2

Query: 227 YGVGLRLFRMAPLHHHFELCGFKEPHIVACTYVVSCILAIYAGYVGLISA 78
           +G G RL RMAP HHH E  G KE HIVA  Y+VS +L  +A +VGLISA
Sbjct: 276 HGTGRRLLRMAPFHHHLEHLGMKELHIVAGAYLVSALLVTFAAHVGLISA 325


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