BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011667
         (1286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial pro...   572   e-161
ref|XP_002528785.1| RNA binding protein, putative [Ricinus commu...   571   e-160
emb|CBI29620.3| unnamed protein product [Vitis vinifera]              569   e-160
ref|XP_002329588.1| predicted protein [Populus trichocarpa] gi|2...   561   e-157
ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   555   e-155

>ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
            vinifera]
          Length = 749

 Score =  572 bits (1474), Expect = e-161
 Identities = 282/384 (73%), Positives = 319/384 (83%), Gaps = 1/384 (0%)
 Frame = +3

Query: 138  FTYTKLLINLTNTHFTKPVFNKNGVSLFRCMSNIAMQRRVVTDPDDVSTLMREDGVAICS 317
            F+ T   +    + F  P    NG S FR  S  A  RR   DPDD STLM+EDGVA+CS
Sbjct: 34   FSATNNFLLYAKSDFPNP--RNNGFSFFRAFSFAAANRRT-PDPDDPSTLMKEDGVALCS 90

Query: 318  TMWIDNFVEPDKTVSNLIDYLRHFELWVLAYQKVSADEIGTFMPKSAIQKPALEDLLALR 497
             MWIDNF  PD TV+NL  +LR FELWVLAYQKV ADE+G +MP+SAIQ+ ALEDLL LR
Sbjct: 91   QMWIDNFRVPDATVTNLTSFLRRFELWVLAYQKVCADEMGAYMPRSAIQRSALEDLLGLR 150

Query: 498  NAVLDNRFKWGSRLDFFVRSPKDKTDLQGLSKRKIRAILTTTQPAAFQDRVVQEVLLMML 677
            NAVLD+RFKWG+RL+FF++SPKDKT+ + LSKRKIRAILTTTQPA FQD++VQEVL M+L
Sbjct: 151  NAVLDSRFKWGARLEFFIKSPKDKTEYESLSKRKIRAILTTTQPAPFQDKIVQEVLFMIL 210

Query: 678  EPIYEARFLQKSCAFRPGRNAHTVLRVIRRNFAGYLWYVKGDLSTVLDGMNVGMVINALM 857
            EPIYEARF +KS AFRPGRNAH+VLRVIRR+FAGYLWY+KGDLST+LDGM VG+VI+ALM
Sbjct: 211  EPIYEARFSEKSFAFRPGRNAHSVLRVIRRSFAGYLWYIKGDLSTILDGMKVGLVISALM 270

Query: 858  RDVRDKKVIDLIKSALVTPVITSCPDVG-VXXXXXXXXXXXXVLADDEPKPDPYWLQTFF 1034
            RDVRDKKVIDL+K+ALVTPVITS  D G              VLA+DEPKPDPYWL+TFF
Sbjct: 271  RDVRDKKVIDLLKAALVTPVITSQVDEGEKKKKKKRKYQKKRVLAEDEPKPDPYWLETFF 330

Query: 1035 GFAPEEADKLPSWGHLGVLSPLLANICLDELDRWMEGKIKEFYKPSKSDVIWNSPEGGEE 1214
            GFAPEEA+KLPSWGH G+LSPLLAN+CLDELDRWMEGKIKEFY+PSKSDVIWNSP+G  E
Sbjct: 331  GFAPEEAEKLPSWGHCGILSPLLANVCLDELDRWMEGKIKEFYRPSKSDVIWNSPDGEVE 390

Query: 1215 QGNTSWPEFVPTSGPDKTRKMDYI 1286
            QGNTSWPEFVPTSGPDKTRKMDYI
Sbjct: 391  QGNTSWPEFVPTSGPDKTRKMDYI 414


>ref|XP_002528785.1| RNA binding protein, putative [Ricinus communis]
            gi|223531788|gb|EEF33607.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 732

 Score =  571 bits (1472), Expect = e-160
 Identities = 287/399 (71%), Positives = 326/399 (81%), Gaps = 9/399 (2%)
 Frame = +3

Query: 117  MHRRLTIFTYTKLL-INLTNTHFTKPVFNKN--------GVSLFRCMSNIAMQRRVVTDP 269
            M R   +FT+  L   N   T  T  +++KN        G +LFR +S   M RR   DP
Sbjct: 1    MRRCFAVFTHRILNNYNPIGTTTTTFLYSKNCPLNPRINGFALFRLLSFTPMHRRN-PDP 59

Query: 270  DDVSTLMREDGVAICSTMWIDNFVEPDKTVSNLIDYLRHFELWVLAYQKVSADEIGTFMP 449
            DD +TLM+EDGV++CS MWI+NF EPD+TV+NL  YLR FELWVLAYQKVSADE+G ++P
Sbjct: 60   DDPATLMKEDGVSVCSQMWIENFREPDRTVNNLTSYLRRFELWVLAYQKVSADEMGAYLP 119

Query: 450  KSAIQKPALEDLLALRNAVLDNRFKWGSRLDFFVRSPKDKTDLQGLSKRKIRAILTTTQP 629
            +SAIQ+ ALEDLLALRNAVLDNRFKWG+RL FF++SPKDKTD + LSKRKI+AILTTTQP
Sbjct: 120  RSAIQRSALEDLLALRNAVLDNRFKWGARLQFFIKSPKDKTDYESLSKRKIKAILTTTQP 179

Query: 630  AAFQDRVVQEVLLMMLEPIYEARFLQKSCAFRPGRNAHTVLRVIRRNFAGYLWYVKGDLS 809
            AAFQD++VQEVL M+LEPIYEARF QKS AFRPGRNAHT LRVIRR+FAGYLWY+KGDLS
Sbjct: 180  AAFQDKIVQEVLFMILEPIYEARFSQKSYAFRPGRNAHTALRVIRRSFAGYLWYIKGDLS 239

Query: 810  TVLDGMNVGMVINALMRDVRDKKVIDLIKSALVTPVITSCPDVGVXXXXXXXXXXXXVLA 989
            TVLDG+  G+VI+ALMRDVRDKKVIDL+K+AL TPVIT+  +               VLA
Sbjct: 240  TVLDGVKAGLVISALMRDVRDKKVIDLVKAALTTPVITTSVE-EPKKKKKRKYQKKRVLA 298

Query: 990  DDEPKPDPYWLQTFFGFAPEEADKLPSWGHLGVLSPLLANICLDELDRWMEGKIKEFYKP 1169
            +DEPKPDPYWL+TFFGFAPEEA KLPSWGH G+LSPLLANICLDELDRWMEGKIKEFY P
Sbjct: 299  EDEPKPDPYWLETFFGFAPEEAGKLPSWGHCGILSPLLANICLDELDRWMEGKIKEFYHP 358

Query: 1170 SKSDVIWNSPEGGEEQGNTSWPEFVPTSGPDKTRKMDYI 1286
            SKSDVIWNSPEG  EQGNTSWPEFVPTSGPDKTRKMDYI
Sbjct: 359  SKSDVIWNSPEGEAEQGNTSWPEFVPTSGPDKTRKMDYI 397


>emb|CBI29620.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  569 bits (1466), Expect = e-160
 Identities = 280/383 (73%), Positives = 317/383 (82%)
 Frame = +3

Query: 138  FTYTKLLINLTNTHFTKPVFNKNGVSLFRCMSNIAMQRRVVTDPDDVSTLMREDGVAICS 317
            F+ T   +    + F  P    NG S FR  S  A  RR   DPDD STLM+EDGVA+CS
Sbjct: 31   FSATNNFLLYAKSDFPNP--RNNGFSFFRAFSFAAANRRT-PDPDDPSTLMKEDGVALCS 87

Query: 318  TMWIDNFVEPDKTVSNLIDYLRHFELWVLAYQKVSADEIGTFMPKSAIQKPALEDLLALR 497
             MWIDNF  PD TV+NL  +LR FELWVLAYQKV ADE+G +MP+SAIQ+ ALEDLL LR
Sbjct: 88   QMWIDNFRVPDATVTNLTSFLRRFELWVLAYQKVCADEMGAYMPRSAIQRSALEDLLGLR 147

Query: 498  NAVLDNRFKWGSRLDFFVRSPKDKTDLQGLSKRKIRAILTTTQPAAFQDRVVQEVLLMML 677
            NAVLD+RFKWG+RL+FF++SPKDKT+ + LSKRKIRAILTTTQPA FQD++VQEVL M+L
Sbjct: 148  NAVLDSRFKWGARLEFFIKSPKDKTEYESLSKRKIRAILTTTQPAPFQDKIVQEVLFMIL 207

Query: 678  EPIYEARFLQKSCAFRPGRNAHTVLRVIRRNFAGYLWYVKGDLSTVLDGMNVGMVINALM 857
            EPIYEARF +KS AFRPGRNAH+VLRVIRR+FAGYLWY+KGDLST+LDGM VG+VI+ALM
Sbjct: 208  EPIYEARFSEKSFAFRPGRNAHSVLRVIRRSFAGYLWYIKGDLSTILDGMKVGLVISALM 267

Query: 858  RDVRDKKVIDLIKSALVTPVITSCPDVGVXXXXXXXXXXXXVLADDEPKPDPYWLQTFFG 1037
            RDVRDKKVIDL+K+ALVTPVITS                  VLA+DEPKPDPYWL+TFFG
Sbjct: 268  RDVRDKKVIDLLKAALVTPVITS---------------QKRVLAEDEPKPDPYWLETFFG 312

Query: 1038 FAPEEADKLPSWGHLGVLSPLLANICLDELDRWMEGKIKEFYKPSKSDVIWNSPEGGEEQ 1217
            FAPEEA+KLPSWGH G+LSPLLAN+CLDELDRWMEGKIKEFY+PSKSDVIWNSP+G  EQ
Sbjct: 313  FAPEEAEKLPSWGHCGILSPLLANVCLDELDRWMEGKIKEFYRPSKSDVIWNSPDGEVEQ 372

Query: 1218 GNTSWPEFVPTSGPDKTRKMDYI 1286
            GNTSWPEFVPTSGPDKTRKMDYI
Sbjct: 373  GNTSWPEFVPTSGPDKTRKMDYI 395


>ref|XP_002329588.1| predicted protein [Populus trichocarpa] gi|222870297|gb|EEF07428.1|
            predicted protein [Populus trichocarpa]
          Length = 675

 Score =  561 bits (1446), Expect = e-157
 Identities = 269/341 (78%), Positives = 300/341 (87%)
 Frame = +3

Query: 264  DPDDVSTLMREDGVAICSTMWIDNFVEPDKTVSNLIDYLRHFELWVLAYQKVSADEIGTF 443
            DPDD S LM+EDGV++CS MWI+NF EPD+ VSNL  YLR FELWVLAYQKV AD++G +
Sbjct: 1    DPDDPSNLMKEDGVSVCSQMWIENFREPDRIVSNLTTYLRRFELWVLAYQKVCADDMGAY 60

Query: 444  MPKSAIQKPALEDLLALRNAVLDNRFKWGSRLDFFVRSPKDKTDLQGLSKRKIRAILTTT 623
            MP+SAIQ+ ALEDLLALRNAVLDNRFKWG+RLDF ++SPKDKTD Q LSKRKI+AILTTT
Sbjct: 61   MPRSAIQRSALEDLLALRNAVLDNRFKWGARLDFLIKSPKDKTDYQSLSKRKIKAILTTT 120

Query: 624  QPAAFQDRVVQEVLLMMLEPIYEARFLQKSCAFRPGRNAHTVLRVIRRNFAGYLWYVKGD 803
            QPAAFQD++VQEVL M+LEPIYEARF QKS AFRPGRNAHTVLRVIRRNFAGYLWY+KGD
Sbjct: 121  QPAAFQDKIVQEVLFMILEPIYEARFSQKSFAFRPGRNAHTVLRVIRRNFAGYLWYIKGD 180

Query: 804  LSTVLDGMNVGMVINALMRDVRDKKVIDLIKSALVTPVITSCPDVGVXXXXXXXXXXXXV 983
             ST+LDGM VG+VI+ALMRDVRDKKVIDLIK+AL TPVITS  +               V
Sbjct: 181  FSTILDGMKVGLVISALMRDVRDKKVIDLIKAALTTPVITSRME-EPKKKTKRKYQKKRV 239

Query: 984  LADDEPKPDPYWLQTFFGFAPEEADKLPSWGHLGVLSPLLANICLDELDRWMEGKIKEFY 1163
            LA+DEPKPDPYWL TFFGFAPEEA+K+PSWGH G+LSPLLANICLDELD+WMEGK+KEFY
Sbjct: 240  LAEDEPKPDPYWLDTFFGFAPEEAEKIPSWGHCGILSPLLANICLDELDQWMEGKLKEFY 299

Query: 1164 KPSKSDVIWNSPEGGEEQGNTSWPEFVPTSGPDKTRKMDYI 1286
            +PSKSDVIWNSPEG  EQGNTSWPEFVPTSGPDKTRKMDY+
Sbjct: 300  RPSKSDVIWNSPEGEAEQGNTSWPEFVPTSGPDKTRKMDYV 340


>ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial protein
            ymf11-like [Cucumis sativus]
          Length = 722

 Score =  555 bits (1429), Expect = e-155
 Identities = 281/399 (70%), Positives = 319/399 (79%), Gaps = 9/399 (2%)
 Frame = +3

Query: 117  MHRRLTIFT---YTKLLINLTNTHFTKPVFNK-----NGVSLFRCMSNIAMQRRVVTDPD 272
            MHR + IF    +    +  T++ FT    N      +G  L R  S +   RR   DP+
Sbjct: 1    MHRGVFIFAHRIFASSSVVRTSSGFTFSELNPLKSSFHGFPLCRVFSFVPAHRRA-PDPN 59

Query: 273  DVSTLMREDGVAICSTMWIDNFVEPDKTVSNLIDYLRHFELWVLAYQKVSADEIGTFMPK 452
            D S LM+EDG++ CS MWI+NF EPD+ VSNL  YL+ FELWVLAYQKV ADE+G++MP+
Sbjct: 60   DPSNLMKEDGISACSQMWIENFREPDRIVSNLTTYLQKFELWVLAYQKVCADEMGSYMPR 119

Query: 453  SAIQKPALEDLLALRNAVLDNRFKWGSRLDFFVRSPKDKTDLQGLSKRKIRAILTTTQPA 632
            +AIQ+ ALEDLLALRNAVLD+RF WG+RL FF++SPKDKTD + LSKRKI+AILTTTQPA
Sbjct: 120  NAIQRSALEDLLALRNAVLDSRFNWGARLKFFIKSPKDKTDYEALSKRKIKAILTTTQPA 179

Query: 633  AFQDRVVQEVLLMMLEPIYEARFLQKSCAFRPGRNAHTVLRVIRRNFAGYLWYVKGDLST 812
            AFQD++VQEVL ++LEPIYEARF  KS AFRPGRNAHTVLRVIRR+FAGYLWYVKGDLST
Sbjct: 180  AFQDKIVQEVLFLILEPIYEARFSPKSYAFRPGRNAHTVLRVIRRHFAGYLWYVKGDLST 239

Query: 813  VLDGMNVGMVINALMRDVRDKKVIDLIKSALVTPVITSCPDVG-VXXXXXXXXXXXXVLA 989
            +LDGM VG VINALMRD+RDKKVIDLIKSALVTPVITS  D G              VLA
Sbjct: 240  ILDGMKVGAVINALMRDIRDKKVIDLIKSALVTPVITSKIDEGEKKKKKKRKYQKKKVLA 299

Query: 990  DDEPKPDPYWLQTFFGFAPEEADKLPSWGHLGVLSPLLANICLDELDRWMEGKIKEFYKP 1169
            +DEPKPDPYWL+TFFGFAPEEA K PSWGH G+LSPLLANICLDELD WMEGKIK+FY P
Sbjct: 300  EDEPKPDPYWLETFFGFAPEEAVKNPSWGHCGILSPLLANICLDELDHWMEGKIKDFYSP 359

Query: 1170 SKSDVIWNSPEGGEEQGNTSWPEFVPTSGPDKTRKMDYI 1286
            SKSDVIWNSPEG  +QGNTSWPEFVPTSGPDKTRKMDYI
Sbjct: 360  SKSDVIWNSPEGEXDQGNTSWPEFVPTSGPDKTRKMDYI 398