BLASTX nr result
ID: Coptis25_contig00011653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011653
(684 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263... 128 2e-37
emb|CBI36804.3| unnamed protein product [Vitis vinifera] 128 2e-37
ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 119 3e-34
ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777... 121 3e-34
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat... 118 5e-34
>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
Length = 2002
Score = 128 bits (321), Expect(2) = 2e-37
Identities = 62/69 (89%), Positives = 66/69 (95%), Gaps = 1/69 (1%)
Frame = +3
Query: 480 VTLKMEKVYHPCFLLMKKRYVGYSYETPDQVEPSFDAKGIETVR*DSCGAVAKTMEQ-LR 656
VTLKMEKVYHPCFLL KKRYVGYSYE+PDQ+EP+FDAKGIETVR D+CGAVAKTMEQ LR
Sbjct: 844 VTLKMEKVYHPCFLLTKKRYVGYSYESPDQIEPTFDAKGIETVRRDTCGAVAKTMEQSLR 903
Query: 657 LFFEHQDIS 683
LFFEHQDIS
Sbjct: 904 LFFEHQDIS 912
Score = 53.5 bits (127), Expect(2) = 2e-37
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1
Query: 376 DAESMFVLLKGRTMKESFSIGQELASVITLMNP 474
D +SMFVLLKGRT+KESF IG E+AS +T MNP
Sbjct: 809 DTDSMFVLLKGRTVKESFQIGHEIASAVTAMNP 841
>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 128 bits (321), Expect(2) = 2e-37
Identities = 62/69 (89%), Positives = 66/69 (95%), Gaps = 1/69 (1%)
Frame = +3
Query: 480 VTLKMEKVYHPCFLLMKKRYVGYSYETPDQVEPSFDAKGIETVR*DSCGAVAKTMEQ-LR 656
VTLKMEKVYHPCFLL KKRYVGYSYE+PDQ+EP+FDAKGIETVR D+CGAVAKTMEQ LR
Sbjct: 1401 VTLKMEKVYHPCFLLTKKRYVGYSYESPDQIEPTFDAKGIETVRRDTCGAVAKTMEQSLR 1460
Query: 657 LFFEHQDIS 683
LFFEHQDIS
Sbjct: 1461 LFFEHQDIS 1469
Score = 53.5 bits (127), Expect(2) = 2e-37
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1
Query: 376 DAESMFVLLKGRTMKESFSIGQELASVITLMNP 474
D +SMFVLLKGRT+KESF IG E+AS +T MNP
Sbjct: 1366 DTDSMFVLLKGRTVKESFQIGHEIASAVTAMNP 1398
Score = 97.1 bits (240), Expect = 3e-18
Identities = 45/77 (58%), Positives = 58/77 (75%)
Frame = +2
Query: 5 GWIWPHSTETDSSPDQELCLIKRQSICELEGDATVDDILNQQFKMYSPLSQICSDVKMVQ 184
GW+W S++ D+SP Q +C KRQS CELEGDA V++ILNQQFK+YS LSQ SDVKMV+
Sbjct: 253 GWMWQFSSQLDASPGQGICSPKRQSTCELEGDAIVEEILNQQFKLYSSLSQTHSDVKMVR 312
Query: 185 SLVPMWRSMKEQGCMRK 235
SL+P+W E+ M +
Sbjct: 313 SLIPIWEEEFERTGMHE 329
Score = 65.5 bits (158), Expect = 1e-08
Identities = 29/53 (54%), Positives = 42/53 (79%)
Frame = +1
Query: 202 EEYERTGVHEEVIHSDPSKPLPENVLKTLSHGPEFEDALLYICSKAEKSSSSQ 360
EE+ERTG+HE + DP KPLPE+VL++LSHG EFE+ L +C++AEK + ++
Sbjct: 320 EEFERTGMHEVAMPPDPGKPLPEDVLRSLSHGLEFENKLGELCNQAEKFNQNK 372
>ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222413
[Cucumis sativus]
Length = 2868
Score = 119 bits (298), Expect(2) = 3e-34
Identities = 58/69 (84%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Frame = +3
Query: 480 VTLKMEKVYHPCFLLMKKRYVGYSYETPDQVEPSFDAKGIETVR*DSCGAVAKTMEQ-LR 656
VTLKMEKVY PCFLL KKRYVGYS+E+P+Q+EP+FDAKGIETVR D+C AVAKTMEQ LR
Sbjct: 1692 VTLKMEKVYSPCFLLTKKRYVGYSFESPEQIEPTFDAKGIETVRRDTCAAVAKTMEQSLR 1751
Query: 657 LFFEHQDIS 683
LFFEHQDIS
Sbjct: 1752 LFFEHQDIS 1760
Score = 52.0 bits (123), Expect(2) = 3e-34
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1
Query: 376 DAESMFVLLKGRTMKESFSIGQELASVITLMNP 474
D +SMFVLLKGRT+K++F IGQE+AS I+ MNP
Sbjct: 1657 DTDSMFVLLKGRTVKQAFGIGQEIASAISAMNP 1689
Score = 81.3 bits (199), Expect(2) = 2e-20
Identities = 38/72 (52%), Positives = 47/72 (65%)
Frame = +2
Query: 8 WIWPHSTETDSSPDQELCLIKRQSICELEGDATVDDILNQQFKMYSPLSQICSDVKMVQS 187
W+W T D+ D + KRQS+CELEGD TV+DILNQ K+Y+ SQ SDVKMVQS
Sbjct: 256 WMWKFPTAMDTLDDNGINFCKRQSVCELEGDVTVEDILNQHSKLYTSFSQNHSDVKMVQS 315
Query: 188 LVPMWRSMKEQG 223
LV +W + G
Sbjct: 316 LVSIWEEYRRTG 327
Score = 43.9 bits (102), Expect(2) = 2e-20
Identities = 25/59 (42%), Positives = 33/59 (55%)
Frame = +1
Query: 202 EEYERTGVHEEVIHSDPSKPLPENVLKTLSHGPEFEDALLYICSKAEKSSSSQGPPSED 378
EEY RTGV E + DP KPL + VL+T S G ++E L + + KS S P +D
Sbjct: 321 EEYRRTGVQEAPLPPDPGKPLAKEVLETFSPGMDYEKKLTELYER-PKSPSVLTPLEKD 378
>ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
Length = 2793
Score = 121 bits (304), Expect(2) = 3e-34
Identities = 59/70 (84%), Positives = 64/70 (91%), Gaps = 1/70 (1%)
Frame = +3
Query: 474 SAVTLKMEKVYHPCFLLMKKRYVGYSYETPDQVEPSFDAKGIETVR*DSCGAVAKTMEQ- 650
S VTLKMEKVYHPCFLL KKRYVGYSYE+PDQ+EP FDAKGIETVR D+CGAVAK MEQ
Sbjct: 1616 SPVTLKMEKVYHPCFLLTKKRYVGYSYESPDQIEPVFDAKGIETVRRDTCGAVAKIMEQS 1675
Query: 651 LRLFFEHQDI 680
LRLFFEHQ++
Sbjct: 1676 LRLFFEHQNL 1685
Score = 49.7 bits (117), Expect(2) = 3e-34
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +1
Query: 376 DAESMFVLLKGRTMKESFSIGQELASVITLMNP 474
D +SMFVLL+G T+KESF IG E+AS IT MNP
Sbjct: 1583 DTDSMFVLLRGCTVKESFQIGSEIASAITAMNP 1615
Score = 89.7 bits (221), Expect(2) = 7e-27
Identities = 41/71 (57%), Positives = 53/71 (74%)
Frame = +2
Query: 8 WIWPHSTETDSSPDQELCLIKRQSICELEGDATVDDILNQQFKMYSPLSQICSDVKMVQS 187
W+W +++ + + E KRQSICELEGD +VD+ILNQQFKMYS LSQ CSDV MVQS
Sbjct: 200 WMWSPPSKSGALSNDEAHCPKRQSICELEGDTSVDEILNQQFKMYSSLSQTCSDVNMVQS 259
Query: 188 LVPMWRSMKEQ 220
LVP+W +++
Sbjct: 260 LVPIWEEQQKR 270
Score = 57.0 bits (136), Expect(2) = 7e-27
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 202 EEYERTGVHEEVIHSDPSKPLPENVLKTLSHGPEFEDALLYICSKAEKS 348
E+ +R GVHE + SDP KPLPE+V+K LS G +FE + +CS+AE S
Sbjct: 266 EQQKRNGVHEATMPSDPGKPLPEDVMKLLSVGLDFEKKFIELCSEAETS 314
>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
subunit, putative [Ricinus communis]
Length = 2066
Score = 118 bits (295), Expect(2) = 5e-34
Identities = 58/69 (84%), Positives = 62/69 (89%), Gaps = 1/69 (1%)
Frame = +3
Query: 480 VTLKMEKVYHPCFLLMKKRYVGYSYETPDQVEPSFDAKGIETVR*DSCGAVAKTMEQ-LR 656
VTLK+EKVYHPCFLL KKRYVGYSYE+ DQ EP FDAKGIETVR D+CGAVAK +EQ LR
Sbjct: 865 VTLKLEKVYHPCFLLTKKRYVGYSYESADQTEPVFDAKGIETVRRDTCGAVAKMLEQSLR 924
Query: 657 LFFEHQDIS 683
LFFEHQDIS
Sbjct: 925 LFFEHQDIS 933
Score = 52.4 bits (124), Expect(2) = 5e-34
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1
Query: 376 DAESMFVLLKGRTMKESFSIGQELASVITLMNP 474
D +SMFVLLKGRT++ESF IG+E+AS +T MNP
Sbjct: 830 DTDSMFVLLKGRTVEESFQIGREIASAVTAMNP 862