BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011652
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA43773.1| TPA: hypothetical protein ZEAMMB73_906785 [Zea m...    59   4e-12
ref|XP_002468369.1| hypothetical protein SORBIDRAFT_01g044780 [S...    59   4e-12
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...    64   5e-12
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...    64   3e-11
ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    65   5e-11

>tpg|DAA43773.1| TPA: hypothetical protein ZEAMMB73_906785 [Zea mays]
          Length = 706

 Score = 58.9 bits (141), Expect(2) = 4e-12
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = -1

Query: 149 PRKFDSIWKDSVSDGCHNPA*PEFVPSSGREKTSRLLF 36
           P K DSIWK+   DGCHNPA PEFVPS+G+EKT ++ F
Sbjct: 352 PSKHDSIWKEVGDDGCHNPAWPEFVPSAGKEKTRKMDF 389



 Score = 37.0 bits (84), Expect(2) = 4e-12
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -3

Query: 204 CLTEFENWMEEKIMKYFCPSE 142
           CL E + WMEEKI +YFCPS+
Sbjct: 334 CLNELDWWMEEKINQYFCPSK 354


>ref|XP_002468369.1| hypothetical protein SORBIDRAFT_01g044780 [Sorghum bicolor]
           gi|241922223|gb|EER95367.1| hypothetical protein
           SORBIDRAFT_01g044780 [Sorghum bicolor]
          Length = 706

 Score = 58.9 bits (141), Expect(2) = 4e-12
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = -1

Query: 149 PRKFDSIWKDSVSDGCHNPA*PEFVPSSGREKTSRLLF 36
           P K DSIWK+   DGCHNPA PEFVPS+G+EKT ++ F
Sbjct: 352 PSKHDSIWKEVGDDGCHNPAWPEFVPSAGKEKTRKMDF 389



 Score = 37.0 bits (84), Expect(2) = 4e-12
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -3

Query: 204 CLTEFENWMEEKIMKYFCPSE 142
           CL E + WMEEKI +YFCPS+
Sbjct: 334 CLNELDWWMEEKINQYFCPSK 354


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score = 63.5 bits (153), Expect(2) = 5e-12
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -1

Query: 149 PRKFDSIWKDSVSDGCHNPA*PEFVPSSGREKTSRL 42
           P  FDSIWK S+ DGCHNPA PEFVPSSGREKT ++
Sbjct: 341 PCAFDSIWKHSIDDGCHNPAWPEFVPSSGREKTRKM 376



 Score = 32.0 bits (71), Expect(2) = 5e-12
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -3

Query: 204 CLTEFENWMEEKIMKYFCP 148
           CL E ++WMEEKI+++F P
Sbjct: 323 CLNELDHWMEEKIVEFFRP 341


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score = 64.3 bits (155), Expect(2) = 3e-11
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = -1

Query: 149 PRKFDSIWKDSVSDGCHNPA*PEFVPSSGREKTSRL 42
           P K DSIWKDS+ DGCHNP+ PEFVPSSG+EKT ++
Sbjct: 334 PNKSDSIWKDSIDDGCHNPSWPEFVPSSGKEKTRKI 369



 Score = 28.5 bits (62), Expect(2) = 3e-11
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -3

Query: 204 CLTEFENWMEEKIMKYFCPSE 142
           CL E +  MEEKI+K+F P++
Sbjct: 316 CLNELDQIMEEKIVKFFRPNK 336


>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score = 65.1 bits (157), Expect(2) = 5e-11
 Identities = 26/36 (72%), Positives = 32/36 (88%)
 Frame = -1

Query: 149 PRKFDSIWKDSVSDGCHNPA*PEFVPSSGREKTSRL 42
           P K DSIWKDS++DGCHNPA PEFVP+SG+EKT ++
Sbjct: 358 PSKLDSIWKDSINDGCHNPAWPEFVPASGKEKTRKM 393



 Score = 26.9 bits (58), Expect(2) = 5e-11
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -3

Query: 204 CLTEFENWMEEKIMKYFCPSEV 139
           CL E +  ME+KI++YF PS++
Sbjct: 340 CLHELDLVMEDKIVEYFRPSKL 361