BLASTX nr result

ID: Coptis25_contig00011643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011643
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37680.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reduct...   132   4e-29
ref|XP_002313034.1| dihydrofolate reductase-thymidylate synthase...   130   1e-28
ref|XP_003541010.1| PREDICTED: bifunctional dihydrofolate reduct...   130   1e-28
ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reduct...   130   2e-28

>emb|CBI37680.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  132 bits (332), Expect = 4e-29
 Identities = 60/72 (83%), Positives = 68/72 (94%)
 Frame = -1

Query: 563 DVVPGDFIHVIGDAHVYKTHVRPLQEQLQRLPKPFPILKINPQKKDIDSFTAADLELIGY 384
           D+VPGDFIHVIGD+HVY TH+RPLQEQLQ+LPKPFPILKINPQKK+IDSF AAD +LIGY
Sbjct: 537 DLVPGDFIHVIGDSHVYLTHIRPLQEQLQKLPKPFPILKINPQKKNIDSFVAADFQLIGY 596

Query: 383 YPHQKIEMQMAI 348
            PHQKIEM+MA+
Sbjct: 597 DPHQKIEMKMAV 608


>ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Vitis vinifera]
          Length = 524

 Score =  132 bits (332), Expect = 4e-29
 Identities = 60/72 (83%), Positives = 68/72 (94%)
 Frame = -1

Query: 563 DVVPGDFIHVIGDAHVYKTHVRPLQEQLQRLPKPFPILKINPQKKDIDSFTAADLELIGY 384
           D+VPGDFIHVIGD+HVY TH+RPLQEQLQ+LPKPFPILKINPQKK+IDSF AAD +LIGY
Sbjct: 453 DLVPGDFIHVIGDSHVYLTHIRPLQEQLQKLPKPFPILKINPQKKNIDSFVAADFQLIGY 512

Query: 383 YPHQKIEMQMAI 348
            PHQKIEM+MA+
Sbjct: 513 DPHQKIEMKMAV 524


>ref|XP_002313034.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
           gi|222849442|gb|EEE86989.1| dihydrofolate
           reductase-thymidylate synthase [Populus trichocarpa]
          Length = 414

 Score =  130 bits (328), Expect = 1e-28
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = -1

Query: 563 DVVPGDFIHVIGDAHVYKTHVRPLQEQLQRLPKPFPILKINPQKKDIDSFTAADLELIGY 384
           D+VPGDFIHVIGDAHVY TH+RPLQEQL +LPKPFPILKIN +KKDIDSF AAD ELIGY
Sbjct: 343 DLVPGDFIHVIGDAHVYHTHIRPLQEQLHKLPKPFPILKINSEKKDIDSFVAADFELIGY 402

Query: 383 YPHQKIEMQMAI 348
            PHQKIEM+MA+
Sbjct: 403 DPHQKIEMKMAV 414


>ref|XP_003541010.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Glycine max]
          Length = 530

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = -1

Query: 563 DVVPGDFIHVIGDAHVYKTHVRPLQEQLQRLPKPFPILKINPQKKDIDSFTAADLELIGY 384
           D+VPGDFIHVIGDAHVY+ HVRPLQEQLQ  PKPFPILKINP+KKDIDSF AAD +LIGY
Sbjct: 459 DLVPGDFIHVIGDAHVYRNHVRPLQEQLQNQPKPFPILKINPKKKDIDSFVAADFKLIGY 518

Query: 383 YPHQKIEMQMAI 348
            PHQKIEM+MA+
Sbjct: 519 DPHQKIEMKMAV 530


>ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Glycine max]
          Length = 528

 Score =  130 bits (326), Expect = 2e-28
 Identities = 59/72 (81%), Positives = 66/72 (91%)
 Frame = -1

Query: 563 DVVPGDFIHVIGDAHVYKTHVRPLQEQLQRLPKPFPILKINPQKKDIDSFTAADLELIGY 384
           D+VPGDFIHVIGDAHVY+ HVRPLQEQLQ  PKPFPILKINP+KKDIDSF A+D +LIGY
Sbjct: 457 DLVPGDFIHVIGDAHVYRNHVRPLQEQLQNQPKPFPILKINPKKKDIDSFVASDFKLIGY 516

Query: 383 YPHQKIEMQMAI 348
            PHQKIEM+MA+
Sbjct: 517 VPHQKIEMKMAV 528


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