BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011641
         (1551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containi...   358   3e-96
ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containi...   334   3e-89
ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [S...   247   5e-63
ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968...   245   2e-62
ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group] g...   241   5e-61

>ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
            mitochondrial [Vitis vinifera]
            gi|297738261|emb|CBI27462.3| unnamed protein product
            [Vitis vinifera]
          Length = 386

 Score =  358 bits (918), Expect = 3e-96
 Identities = 182/370 (49%), Positives = 255/370 (68%), Gaps = 1/370 (0%)
 Frame = +2

Query: 125  PPTQYRKSKTLIRNETDPDKIAQVFLKTSDN-PRFYRDRSAFHISVRKLAKLQRFDLVEK 301
            P T +  +K+ + +E DP+K+A +F   S N  RF R R  + +S R+L++  R DLVE+
Sbjct: 23   PFTTFLAAKSAVESEPDPEKLAHIFHHQSSNFARFRRHRPLYQLSCRRLSRSGRLDLVER 82

Query: 302  ILEQQIETPLLKTEGFWIRIMMLYSHAKMLDQVIATFDRIAELDCNQTDKSMCALLSACL 481
            +++ Q   P  +TEGFWIR++MLYS + M+D  + TF ++ +     T+KS+CA+L+  L
Sbjct: 83   LIDHQKTLPHPRTEGFWIRLIMLYSTSGMVDHALRTFHQMVQDRVQLTEKSLCAILTVYL 142

Query: 482  QNRRFDLVHQYFESVPAKTAIKPGVVAYNLLMRAYCDEKKIDSARSLLDKMESEKGIKPD 661
             N   D +H  F ++P++  + PG  +Y+L+++A+C +K ++SAR LL KME+     PD
Sbjct: 143  DNDLIDQLHTVFNTMPSEIGVSPGTKSYSLVLKAFCQQKDMESARKLLHKMEN-----PD 197

Query: 662  IASYNVVLTAYLRNGEEEKFDKLFDELLNKGLEPNLVTYNLRIKWFCKKKDCDRAKEILQ 841
            I SYNV+L AY  NG+  +FD++  E+ NKGLE +  TYN RI  FCK K+  RAK++L 
Sbjct: 198  IGSYNVLLEAYSENGDGVEFDEILKEIKNKGLEHDCTTYNHRILRFCKNKESVRAKKLLD 257

Query: 842  EMLAKGVKPNVNSYNAVIDGFCKIADFESAKKVFDAMNAGDESVKPNSDSYITLIQQLVQ 1021
            EM+AKGVKPN  SYN +I GFCK+ DFESA+KV   M A D  V P S SYITL Q +V+
Sbjct: 258  EMVAKGVKPNSASYNMIIHGFCKVGDFESAQKVLGRMLA-DGYVAPCSISYITLFQHMVK 316

Query: 1022 EKEFIQALDMCKESLQKKWVPPFTSMEGLVKGLVEISKADEAKEIVETMKKRLRGSAPES 1201
            E EF  AL+MCKE +++KWVPPF +M+GLVKGLVEISK + AKE+VE MKKRL+G+A +S
Sbjct: 317  EGEFDSALNMCKEIIRRKWVPPFEAMDGLVKGLVEISKVEAAKEVVEKMKKRLKGNAADS 376

Query: 1202 WSKVEGLLPL 1231
            W   E  LPL
Sbjct: 377  WKTHEAALPL 386


>ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
            mitochondrial-like [Cucumis sativus]
            gi|449494815|ref|XP_004159654.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g61870,
            mitochondrial-like [Cucumis sativus]
          Length = 405

 Score =  334 bits (857), Expect = 3e-89
 Identities = 165/371 (44%), Positives = 251/371 (67%), Gaps = 2/371 (0%)
 Frame = +2

Query: 125  PPTQYRKSKTLIRNETDPDKIAQVFLKTSDNPRFYRDRSAFHISVRKLAKLQRFDLVEKI 304
            P    R +K+ I +++DPDK+AQ F++ S  P F R R  +H S+RKLA+ QRFDL++ I
Sbjct: 36   PFPSLRAAKSAILSQSDPDKLAQSFIQASTLPSFCRYRPIYHQSIRKLARAQRFDLIDVI 95

Query: 305  LEQQIETPLLKTEGFWIRIMMLYSHAKMLDQVIATFDR-IAELDCNQTDKSMCALLSACL 481
            ++   ++P   +EGFWIR++MLYS   M++Q +   D+ I    CN ++KS+CA+LS  L
Sbjct: 96   IQSHHKSPSATSEGFWIRLIMLYSSVGMVNQALYILDQAILHKSCNLSEKSLCAILSVFL 155

Query: 482  QNRRFDLVHQYFESVPAKTAIKPGVVAYNLLMRAYCDEKKIDSARSLLDKM-ESEKGIKP 658
             N   + VH+ F S+P K  + P  V++NL+++A+  +  + SAR+ +D++ + +  + P
Sbjct: 156  DNSMPEKVHEMFRSIPEKIGVTPTAVSHNLVLKAFVRQNDLPSARNWIDELCKDDAKVIP 215

Query: 659  DIASYNVVLTAYLRNGEEEKFDKLFDELLNKGLEPNLVTYNLRIKWFCKKKDCDRAKEIL 838
            +I S+ ++L AY  NG+   FD++  E+  +GLE NL TYN RI   CK K+C RAK+IL
Sbjct: 216  NIDSFTILLGAYWSNGDMIGFDEIEKEISKRGLEFNLATYNYRISRLCKNKECARAKKIL 275

Query: 839  QEMLAKGVKPNVNSYNAVIDGFCKIADFESAKKVFDAMNAGDESVKPNSDSYITLIQQLV 1018
             EM++KGVKPN +SY+++I G+C + D ESA K+   +   D  V P S  Y  LI+ +V
Sbjct: 276  DEMISKGVKPNSSSYDSIIHGYCDVGDIESAMKILKGI-LEDGHVSPTSRIYYRLIRSMV 334

Query: 1019 QEKEFIQALDMCKESLQKKWVPPFTSMEGLVKGLVEISKADEAKEIVETMKKRLRGSAPE 1198
            +E EF  AL+ C+E+++++WVPPF +ME LV+GLV +SK +EAKE+VE MKKRL+G A +
Sbjct: 335  KEGEFEMALETCRETIKRRWVPPFEAMEALVRGLVAMSKVEEAKEVVEKMKKRLKGPAVD 394

Query: 1199 SWSKVEGLLPL 1231
            SW K+E  LPL
Sbjct: 395  SWRKIEAALPL 405


>ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
            gi|241934669|gb|EES07814.1| hypothetical protein
            SORBIDRAFT_04g038280 [Sorghum bicolor]
          Length = 419

 Score =  247 bits (631), Expect = 5e-63
 Identities = 143/378 (37%), Positives = 216/378 (57%), Gaps = 10/378 (2%)
 Frame = +2

Query: 128  PTQYRKSKTLIRNE-TDPDKIAQVFLKTSDNPRFYRDRSAFHISVRKLAKLQRFDLVEKI 304
            P    + K+ IR+  T PD +A +FL    +P F  DR  F +SV +LA   R DLV  +
Sbjct: 40   PADLSRLKSSIRDAATSPDALATLFLSGLPHPAFLADRPLFALSVHRLASAGRRDLVASV 99

Query: 305  LEQQIETPLLK---TEGFWIRIMMLYSHAKMLDQVIATFDRIAELDCNQTDKSMCALLSA 475
            L   + T L     +EGF +R++ LYS A M D  +  F  +       +D+++ ALLS 
Sbjct: 100  LSSSL-TALPSPHPSEGFLLRLISLYSAAGMPDHSLTVFRLVNP----PSDRALSALLST 154

Query: 476  CLQNRRFDLVHQYFESVPAKTAIKPGVVAYNLLMRAYCDEKKIDSARSLLDKMESEKGIK 655
               NR +D   + F ++PA+  IKPG+V++N+L++A      I +ARS  DKM    G++
Sbjct: 155  YHDNRLYDRAVRAFNTLPAELGIKPGLVSHNVLLKALVASGDIAAARSAFDKMPDTAGVQ 214

Query: 656  PDIASYNVVLTAYLRNGEEEKFDKLFDELL--NKGLEPNLVTYNLRIKWFCKKKDCDRAK 829
            PDI S N +L  YL  G++  FD+L  E+   N+ L+PN+ TYNLR+   C K+    A+
Sbjct: 215  PDIVSCNEILKGYLSTGDDAAFDQLVKEIAGPNRRLKPNVGTYNLRMAMLCSKERSFEAE 274

Query: 830  EILQEMLAKGVKPNVNSYNAVIDGFCKIADFESAKKVFDAM----NAGDESVKPNSDSYI 997
            E+L  M A GV PN  S+N VI G C   +  +A  +F  M        + V PN ++YI
Sbjct: 275  ELLDAMGANGVPPNRASFNTVIKGLCNEGEVGAAMALFKRMPEVPRQKGKGVSPNFETYI 334

Query: 998  TLIQQLVQEKEFIQALDMCKESLQKKWVPPFTSMEGLVKGLVEISKADEAKEIVETMKKR 1177
             L++ LV +  F  AL++CKE L  KW PPF +++GLV+ L++  KA  A+E++  M+K 
Sbjct: 335  MLLEALVNKNLFDPALEVCKECLHNKWAPPFQAVKGLVESLLKSRKAKHAREVLMAMRKA 394

Query: 1178 LRGSAPESWSKVEGLLPL 1231
            ++G A + W+KVE   P+
Sbjct: 395  VKGDAKQEWTKVEAQFPM 412


>ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968|gb|ACG38952.1|
            hypothetical protein [Zea mays]
            gi|413939592|gb|AFW74143.1| hypothetical protein
            ZEAMMB73_602318 [Zea mays]
          Length = 419

 Score =  245 bits (626), Expect = 2e-62
 Identities = 142/378 (37%), Positives = 217/378 (57%), Gaps = 10/378 (2%)
 Frame = +2

Query: 128  PTQYRKSKTLIRNE-TDPDKIAQVFLKTSDNPRFYRDRSAFHISVRKLAKLQRFDLVEKI 304
            P    + K+ IR+  T PD +A +FL    +P F  DR  F +SV +LA   R DLV  +
Sbjct: 40   PADLSRLKSSIRDAATTPDALATLFLSGLPHPAFLADRPLFALSVHRLASAGRRDLVASV 99

Query: 305  LEQQIETPLLK---TEGFWIRIMMLYSHAKMLDQVIATFDRIAELDCNQTDKSMCALLSA 475
            L   + T L     +EGF +R++ LYS A M D  +A F  +       +D+++ ALLSA
Sbjct: 100  LSSSL-TALPSPHPSEGFLLRLISLYSAAGMPDHSLAVFRLVKPA----SDRALSALLSA 154

Query: 476  CLQNRRFDLVHQYFESVPAKTAIKPGVVAYNLLMRAYCDEKKIDSARSLLDKMESEKGIK 655
               NR +D   + F ++PA+  IKPG+V++N+L++A      + +A +L D+M    G++
Sbjct: 155  YHDNRLYDRTVRAFNTLPAELGIKPGLVSHNVLLKALVASGDVAAAHTLFDEMPDTAGVQ 214

Query: 656  PDIASYNVVLTAYLRNGEEEKFDKLFDELLN--KGLEPNLVTYNLRIKWFCKKKDCDRAK 829
            PDI S N +L  YL  G+ + FD+L  E+    + L+PN+ TYNLR+   C K     A+
Sbjct: 215  PDIVSCNEILKGYLNAGDADAFDRLVKEIAGPKRRLKPNVGTYNLRMALLCSKMRSFEAE 274

Query: 830  EILQEMLAKGVKPNVNSYNAVIDGFCKIADFESAKKVFDAM----NAGDESVKPNSDSYI 997
            E+L  M A GV PN  S+N VI G C   +  +A  +F  M        + V PN ++YI
Sbjct: 275  ELLDVMGANGVPPNRTSFNTVIKGLCNEGEVGAAMALFKRMPEVPRQHGKGVSPNFETYI 334

Query: 998  TLIQQLVQEKEFIQALDMCKESLQKKWVPPFTSMEGLVKGLVEISKADEAKEIVETMKKR 1177
             L++ LV++  F  AL++CKE L+ KW PPF +++GLV+GL++  KA  A+E+   M+K 
Sbjct: 335  MLLEALVKKNLFDPALEICKECLRNKWAPPFQAVKGLVQGLLKSRKAKHAREVFMAMRKA 394

Query: 1178 LRGSAPESWSKVEGLLPL 1231
            ++G A + W KVE   P+
Sbjct: 395  VKGDAKQEWIKVEAQFPM 412


>ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
            gi|48716331|dbj|BAD22943.1| membrane-associated
            salt-inducible protein-like [Oryza sativa Japonica Group]
            gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza sativa
            Japonica Group] gi|125584252|gb|EAZ25183.1| hypothetical
            protein OsJ_08983 [Oryza sativa Japonica Group]
            gi|215769058|dbj|BAH01287.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 423

 Score =  241 bits (614), Expect = 5e-61
 Identities = 142/375 (37%), Positives = 210/375 (56%), Gaps = 12/375 (3%)
 Frame = +2

Query: 128  PTQYRKSKTLIRNETD-PDKIAQVFLKTSDNPRFYRDRSAFHISVRKLAKLQRFDLVEKI 304
            P      K  IR+    P+ +A +F+    +P F  DR  F +SV +LA   R DLV  I
Sbjct: 41   PADLATLKNSIRSAAHTPEALADLFISGLSHPAFLADRPIFTLSVHRLASAGRRDLVASI 100

Query: 305  LEQQIETPLLK--TEGFWIRIMMLYSHAKMLDQVIATFDRIAELDCNQTDKSMCALLSAC 478
            L   + +      +EGF IR++ LYS A M D  ++TF  +       +D+++ ALLSA 
Sbjct: 101  LSSSLTSLPAPHPSEGFLIRLISLYSAAGMPDHSLSTFRIVTP----PSDRALSALLSAY 156

Query: 479  LQNRRFDLVHQYFESVPAKTAIKPGVVAYNLLMRAYCDEKKIDSARSLLDKMESEKGIKP 658
              NR +D   Q F ++PA+  IKP VV++N+L++++     + SAR+L D+M S+  ++P
Sbjct: 157  HDNRLYDRAIQAFRTLPAELGIKPSVVSHNVLLKSFVASGDLASARALFDEMPSKADVEP 216

Query: 659  DIASYNVVLTAYLRNGEEEKFDKLFDELLN-----KGLEPNLVTYNLRIKWFCKKKDCDR 823
            DI S N +L  YL   +   FD+   +        + L+PN+ TYNLR+   C K     
Sbjct: 217  DIVSCNEILKGYLNAADYAAFDQFLKDNTTAAGGKRRLKPNVSTYNLRMASLCSKGRSFE 276

Query: 824  AKEILQEMLAKGVKPNVNSYNAVIDGFCKIADFESAKKVFDAM----NAGDESVKPNSDS 991
            A E+L  M AKGV PN  S+N VI G CK  +  +A  +F  M        + V PNS++
Sbjct: 277  AAELLDAMEAKGVPPNRGSFNTVIQGLCKEGEVGAAVAIFKRMPEVPRPNGKGVLPNSET 336

Query: 992  YITLIQQLVQEKEFIQALDMCKESLQKKWVPPFTSMEGLVKGLVEISKADEAKEIVETMK 1171
            YI L++ LV +  F  AL++ KE LQ KW PPF +++GL+KGL++  KA  AKE+   M+
Sbjct: 337  YIMLLEGLVNKGVFAPALEVFKECLQNKWAPPFQAVQGLIKGLLKSRKAKHAKEVAMAMR 396

Query: 1172 KRLRGSAPESWSKVE 1216
            K ++G A E W KVE
Sbjct: 397  KVVKGDAKEEWKKVE 411