BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011637
         (1410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteo...   439   e-120
gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]       435   e-119
ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteo...   430   e-118
ref|NP_001241125.1| uncharacterized protein LOC100785827 [Glycin...   430   e-118
ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|1...   427   e-117

>ref|XP_003549948.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 4, chloroplastic-like [Glycine max]
          Length = 304

 Score =  439 bits (1128), Expect = e-120
 Identities = 232/310 (74%), Positives = 259/310 (83%), Gaps = 7/310 (2%)
 Frame = +1

Query: 100  MEVSTTMSSRFTLNKPT----TLSKTHFPNKLSKTNLQPLGKVSVKSSLTTSFTAPXXXX 267
            MEV+T  SS F LNKP     + S+T  P +   T+  P     V++SL+TSF AP    
Sbjct: 1    MEVATAASS-FALNKPMLALPSSSRTVTPIRCMNTSTSP-----VRTSLSTSFVAPYAGI 54

Query: 268  XXXXXXXX-QKMSPASLNTSS--GSHGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRI 438
                      K+ P+SLN +S  GS+ KRGVVTMVIPF RGSAWEQPPPDLASYLYKNRI
Sbjct: 55   CSASSPFSGHKLRPSSLNPASFLGSNAKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRI 114

Query: 439  VYLGMSLVPSVTELILAEFLYLQYEDDQKPIYLYINSTGTTKGDEKLGYETEAFAIYDVM 618
            VYLGMSLVPSVTELILAEFLYLQYEDD KPIYLYINSTGTTKG EKLGYETEAFAIYDVM
Sbjct: 115  VYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVM 174

Query: 619  RYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIDLARK 798
            RYVKPPIFTLCVGNAWGEAALLLA+GAKGNRSALPSSTIM++QPIARFQGQATD++LAR+
Sbjct: 175  RYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARR 234

Query: 799  EVKNVKAELVNLYARHIGKSPEQIEEDIRRPKYFSPSEAVEYGIIDKVIYNERGSEDRGI 978
            EV NVK ELV LYA+H+ K+PEQIE DI+RPKYFSPSEAVEYGIIDKVIYN+RG+EDRG+
Sbjct: 235  EVNNVKTELVKLYAKHMEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRGTEDRGV 294

Query: 979  VSDLKRAQLI 1008
            VSDLK+A+LI
Sbjct: 295  VSDLKKARLI 304


>gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]
          Length = 305

 Score =  435 bits (1118), Expect = e-119
 Identities = 231/306 (75%), Positives = 253/306 (82%), Gaps = 3/306 (0%)
 Frame = +1

Query: 100  MEVSTTMSSRFTLNKPTTLSKTHFPNKLSKTNLQPLGKVSV-KSSLTTSFTAPXXXXXXX 276
            MEV+TT SS F L+     + T  P   + T   P    S+ ++SL+TSF  P       
Sbjct: 1    MEVATTASS-FALHTRMLATPT-IPRARNTTRPHPTSSRSLPRASLSTSFLCPFAGNSLS 58

Query: 277  XXXXXQKMSPASLNTSS--GSHGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRIVYLG 450
                  K+ P+SLN +S  GS  KRGVVTMVI F RGSAWEQPPPDLASYLYKNRIVYLG
Sbjct: 59   SEFSGHKLRPSSLNPASFRGSEPKRGVVTMVILFQRGSAWEQPPPDLASYLYKNRIVYLG 118

Query: 451  MSLVPSVTELILAEFLYLQYEDDQKPIYLYINSTGTTKGDEKLGYETEAFAIYDVMRYVK 630
            MSLVPSVTELILAEFLYLQYEDD KPIYLYINSTGTTKG EKLGYETEAFAIYDVMRYVK
Sbjct: 119  MSLVPSVTELILAEFLYLQYEDDTKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVK 178

Query: 631  PPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIDLARKEVKN 810
            PPIFTLCVGNAWGEAALLLA+GAKGNRSALPSSTIMMKQPIARFQGQATDI+LAR+EV+N
Sbjct: 179  PPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMMKQPIARFQGQATDIELARREVRN 238

Query: 811  VKAELVNLYARHIGKSPEQIEEDIRRPKYFSPSEAVEYGIIDKVIYNERGSEDRGIVSDL 990
            VK ELV L+A+H+GKS EQIE DIRRPKYFSPSEAVEYGIIDKV+YNER +EDRG+VSDL
Sbjct: 239  VKDELVKLFAKHVGKSTEQIEADIRRPKYFSPSEAVEYGIIDKVLYNERSTEDRGVVSDL 298

Query: 991  KRAQLI 1008
            K+AQLI
Sbjct: 299  KKAQLI 304


>ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 4, chloroplastic-like [Cucumis sativus]
            gi|449510487|ref|XP_004163680.1| PREDICTED: ATP-dependent
            Clp protease proteolytic subunit-related protein 4,
            chloroplastic-like [Cucumis sativus]
          Length = 304

 Score =  430 bits (1106), Expect = e-118
 Identities = 225/305 (73%), Positives = 248/305 (81%), Gaps = 2/305 (0%)
 Frame = +1

Query: 100  MEVSTTMSSRFTLNKPTTLSKTHFPNKLSKTNLQPLGKVSVKSSLTTSFTAPXXXXXXXX 279
            MEV+TT SS F L K  +   T   N  S   L         + L+T+F  P        
Sbjct: 1    MEVATTASS-FALTKRISPLITSSHNGKSNRTLSMSSSSVRMAPLSTNFLIPFAGGSVSG 59

Query: 280  XXXXQKMSPASLNT--SSGSHGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRIVYLGM 453
                 K+ P+SLN   S GS GKRGVVTMVIPF RGSAWEQPPPDLASYLYKNRIVYLGM
Sbjct: 60   EFSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYLGM 119

Query: 454  SLVPSVTELILAEFLYLQYEDDQKPIYLYINSTGTTKGDEKLGYETEAFAIYDVMRYVKP 633
            SLVPSVTELILAEFLYLQYED+ KPIYLY+NSTGTTKG EKLGYETEAFA+YDVM YVKP
Sbjct: 120  SLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYVKP 179

Query: 634  PIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIDLARKEVKNV 813
            PIFTLCVGNAWGEAALLLA+GA GNRSALPSSTIM+K+PIARFQGQATD+++ARKEV+NV
Sbjct: 180  PIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVRNV 239

Query: 814  KAELVNLYARHIGKSPEQIEEDIRRPKYFSPSEAVEYGIIDKVIYNERGSEDRGIVSDLK 993
            KAELV LYA+HIGKS E+IE DIRRPKYFSPSEAVEYGIIDKV+YNER +EDRG+VSDLK
Sbjct: 240  KAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSDLK 299

Query: 994  RAQLI 1008
            +AQLI
Sbjct: 300  KAQLI 304


>ref|NP_001241125.1| uncharacterized protein LOC100785827 [Glycine max]
            gi|255635880|gb|ACU18287.1| unknown [Glycine max]
          Length = 304

 Score =  430 bits (1106), Expect = e-118
 Identities = 229/310 (73%), Positives = 257/310 (82%), Gaps = 7/310 (2%)
 Frame = +1

Query: 100  MEVSTTMSSRFTLNKPT----TLSKTHFPNKLSKTNLQPLGKVSVKSSLTTSFTAPXXXX 267
            MEV+TT SS   LNKP     + S+T  P +   ++       SV++SL+++F AP    
Sbjct: 1    MEVATTASS-IALNKPMLALPSSSRTATPIRAMNSSTS-----SVRTSLSSNFVAPYTGI 54

Query: 268  XXXXXXXX-QKMSPASLNTSS--GSHGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRI 438
                      K+  +SLN  S  GS+ KRGVVTMVIPF RGSAWEQPPPDLASYLYKNRI
Sbjct: 55   NSAYSLFSGHKLRLSSLNPGSFRGSNSKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRI 114

Query: 439  VYLGMSLVPSVTELILAEFLYLQYEDDQKPIYLYINSTGTTKGDEKLGYETEAFAIYDVM 618
            VYLGMSLVPSVTELILAEFLYLQYEDD KPIYLYINSTGTTKG EKLGYETEAFAIYDVM
Sbjct: 115  VYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVM 174

Query: 619  RYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIDLARK 798
            RYVKPPIFTLCVGNAWGEAALLLA+GAKGNRSALPSSTIM++QPIARFQGQATD++LAR+
Sbjct: 175  RYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARR 234

Query: 799  EVKNVKAELVNLYARHIGKSPEQIEEDIRRPKYFSPSEAVEYGIIDKVIYNERGSEDRGI 978
            EV NVK ELV LYA+H+ K+PEQIE DI+RPKYFSPSEAVEYGIIDKVIYN+RGSEDRG+
Sbjct: 235  EVNNVKTELVKLYAKHMEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRGSEDRGV 294

Query: 979  VSDLKRAQLI 1008
            VSDLK+A+LI
Sbjct: 295  VSDLKKARLI 304


>ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|118483146|gb|ABK93479.1|
            unknown [Populus trichocarpa] gi|222870265|gb|EEF07396.1|
            predicted protein [Populus trichocarpa]
          Length = 310

 Score =  427 bits (1097), Expect = e-117
 Identities = 221/310 (71%), Positives = 249/310 (80%), Gaps = 7/310 (2%)
 Frame = +1

Query: 100  MEVSTTMSSRFTLNK-----PTTLSKTHFPNKLSKTNLQPLGKVSVKSSLTTSFTAPXXX 264
            M V+T  +S F  +K     PT  S+   PN+    +  P    S ++SL+T F +P   
Sbjct: 1    MAVATATASSFGFHKRMLASPTVSSRIINPNRTLALSSSPSTSSSSRASLSTCFLSPFAG 60

Query: 265  XXXXXXXXXQKMSPASLNTSS--GSHGKRGVVTMVIPFLRGSAWEQPPPDLASYLYKNRI 438
                      K+ P  LN +S   S GKR VVTMVIP+ RGSAWEQPPPDLASYL+KNRI
Sbjct: 61   GSITCDFSGTKIRPECLNPASISSSKGKRSVVTMVIPYTRGSAWEQPPPDLASYLFKNRI 120

Query: 439  VYLGMSLVPSVTELILAEFLYLQYEDDQKPIYLYINSTGTTKGDEKLGYETEAFAIYDVM 618
            VYLGMSLVPSVTELILAEFLYLQYED++KPIYLYINSTGTTKG EKLGYETEAFAIYDVM
Sbjct: 121  VYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVM 180

Query: 619  RYVKPPIFTLCVGNAWGEAALLLASGAKGNRSALPSSTIMMKQPIARFQGQATDIDLARK 798
             YVKPPIFTLCVGNAWGEAALLLA+G++GNRSALPSSTIMMKQPI RFQGQATD++LARK
Sbjct: 181  GYVKPPIFTLCVGNAWGEAALLLAAGSRGNRSALPSSTIMMKQPIGRFQGQATDVELARK 240

Query: 799  EVKNVKAELVNLYARHIGKSPEQIEEDIRRPKYFSPSEAVEYGIIDKVIYNERGSEDRGI 978
            E+KNVK ELVNL A+HIGK PE+IE DI RPKYFSP+EAVEYGIIDKVIYNER +EDRG+
Sbjct: 241  EIKNVKTELVNLLAKHIGKLPEEIEADISRPKYFSPTEAVEYGIIDKVIYNERTTEDRGV 300

Query: 979  VSDLKRAQLI 1008
            VSDLK+AQLI
Sbjct: 301  VSDLKKAQLI 310