BLASTX nr result

ID: Coptis25_contig00011632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011632
         (1723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD41078.1|AF141204_1 Nramp2 [Arabidopsis thaliana]                144   6e-32
ref|NP_175157.1| metal transporter Nramp2 [Arabidopsis thaliana]...   144   6e-32
ref|XP_002894035.1| NRAMP2 [Arabidopsis lyrata subsp. lyrata] gi...   144   9e-32
emb|CBI19437.3| unnamed protein product [Vitis vinifera]              143   2e-31
ref|XP_002285122.1| PREDICTED: metal transporter Nramp2-like [Vi...   143   2e-31

>gb|AAD41078.1|AF141204_1 Nramp2 [Arabidopsis thaliana]
          Length = 530

 Score =  144 bits (364), Expect = 6e-32
 Identities = 71/100 (71%), Positives = 82/100 (82%)
 Frame = +3

Query: 894  FESLWAGVLITATDCFIFLLLENYGVWKLEAVFAVLIATMAKLFAWMFGETKPSGKEVLI 1073
            F  LWAGV+ITA+DCF+FL LENYGV KLEAVFAVLIATM   FAWMFGETKPSGKE++I
Sbjct: 177  FLPLWAGVVITASDCFLFLFLENYGVRKLEAVFAVLIATMGLSFAWMFGETKPSGKELMI 236

Query: 1074 GVLVPKLSSRTIRQAVGVVGCVIMPQCILAFCGFWIGKKI 1193
            G+L+P+LSS+TIRQAVGVVGCVIMP  +         +KI
Sbjct: 237  GILLPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKI 276


>ref|NP_175157.1| metal transporter Nramp2 [Arabidopsis thaliana]
            gi|29839611|sp|Q9C6B2.1|NRAM2_ARATH RecName: Full=Metal
            transporter Nramp2; Short=AtNramp2
            gi|12325401|gb|AAG52643.1|AC079677_7 stress response
            protein Nramp2; 19015-21280 [Arabidopsis thaliana]
            gi|15294258|gb|AAK95306.1|AF410320_1 At1g47240/F8G22_4
            [Arabidopsis thaliana] gi|20857010|gb|AAM26695.1|
            At1g47240/F8G22_4 [Arabidopsis thaliana]
            gi|332194021|gb|AEE32142.1| metal transporter Nramp2
            [Arabidopsis thaliana]
          Length = 530

 Score =  144 bits (364), Expect = 6e-32
 Identities = 71/100 (71%), Positives = 82/100 (82%)
 Frame = +3

Query: 894  FESLWAGVLITATDCFIFLLLENYGVWKLEAVFAVLIATMAKLFAWMFGETKPSGKEVLI 1073
            F  LWAGV+ITA+DCF+FL LENYGV KLEAVFAVLIATM   FAWMFGETKPSGKE++I
Sbjct: 177  FLPLWAGVVITASDCFLFLFLENYGVRKLEAVFAVLIATMGLSFAWMFGETKPSGKELMI 236

Query: 1074 GVLVPKLSSRTIRQAVGVVGCVIMPQCILAFCGFWIGKKI 1193
            G+L+P+LSS+TIRQAVGVVGCVIMP  +         +KI
Sbjct: 237  GILLPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKI 276


>ref|XP_002894035.1| NRAMP2 [Arabidopsis lyrata subsp. lyrata] gi|297339877|gb|EFH70294.1|
            NRAMP2 [Arabidopsis lyrata subsp. lyrata]
          Length = 532

 Score =  144 bits (362), Expect = 9e-32
 Identities = 70/97 (72%), Positives = 81/97 (83%)
 Frame = +3

Query: 903  LWAGVLITATDCFIFLLLENYGVWKLEAVFAVLIATMAKLFAWMFGETKPSGKEVLIGVL 1082
            LWAGV+ITA+DCF+FL LENYGV KLEAVFAVLIATM   FAWMFGETKPSGKE++IG+L
Sbjct: 182  LWAGVVITASDCFLFLFLENYGVRKLEAVFAVLIATMGLSFAWMFGETKPSGKELMIGIL 241

Query: 1083 VPKLSSRTIRQAVGVVGCVIMPQCILAFCGFWIGKKI 1193
            +P+LSS+TIRQAVGVVGCVIMP  +         +KI
Sbjct: 242  LPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKI 278


>emb|CBI19437.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  143 bits (360), Expect = 2e-31
 Identities = 72/100 (72%), Positives = 80/100 (80%)
 Frame = +3

Query: 894  FESLWAGVLITATDCFIFLLLENYGVWKLEAVFAVLIATMAKLFAWMFGETKPSGKEVLI 1073
            F  LWAGV+ITA+DCFIFL LENYGV KLEAVFAV IATM   FAWMFG+ KPSG+E+LI
Sbjct: 63   FLPLWAGVVITASDCFIFLFLENYGVRKLEAVFAVFIATMGLSFAWMFGDAKPSGRELLI 122

Query: 1074 GVLVPKLSSRTIRQAVGVVGCVIMPQCILAFCGFWIGKKI 1193
            GVLVPKLSS+TIRQAVGVVGCVIMP  +         +KI
Sbjct: 123  GVLVPKLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKI 162


>ref|XP_002285122.1| PREDICTED: metal transporter Nramp2-like [Vitis vinifera]
          Length = 536

 Score =  143 bits (360), Expect = 2e-31
 Identities = 72/100 (72%), Positives = 80/100 (80%)
 Frame = +3

Query: 894  FESLWAGVLITATDCFIFLLLENYGVWKLEAVFAVLIATMAKLFAWMFGETKPSGKEVLI 1073
            F  LWAGV+ITA+DCFIFL LENYGV KLEAVFAV IATM   FAWMFG+ KPSG+E+LI
Sbjct: 185  FLPLWAGVVITASDCFIFLFLENYGVRKLEAVFAVFIATMGLSFAWMFGDAKPSGRELLI 244

Query: 1074 GVLVPKLSSRTIRQAVGVVGCVIMPQCILAFCGFWIGKKI 1193
            GVLVPKLSS+TIRQAVGVVGCVIMP  +         +KI
Sbjct: 245  GVLVPKLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKI 284


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