BLASTX nr result

ID: Coptis25_contig00011621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011621
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...   103   1e-20
ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262...   100   1e-19
emb|CBI33855.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002893719.1| predicted protein [Arabidopsis lyrata subsp....    93   2e-17

>ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus]
           gi|449525814|ref|XP_004169911.1| PREDICTED: E3
           ubiquitin-protein ligase RNF14-like [Cucumis sativus]
          Length = 638

 Score =  103 bits (257), Expect = 1e-20
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = -2

Query: 396 GQMNAKVGNNNHIFCWSCQNHYCYLCRKKVRRSSQHYGPKGCKQHTVG 253
           GQ+NAKVGNNNHI CWSCQ HYCYLCRK V+RSSQHYGPKGCKQHTVG
Sbjct: 591 GQLNAKVGNNNHIRCWSCQIHYCYLCRKVVKRSSQHYGPKGCKQHTVG 638


>ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera]
          Length = 868

 Score =  100 bits (250), Expect = 1e-19
 Identities = 40/47 (85%), Positives = 45/47 (95%)
 Frame = -2

Query: 393 QMNAKVGNNNHIFCWSCQNHYCYLCRKKVRRSSQHYGPKGCKQHTVG 253
           Q+N KVGNNNHIFCWSCQ+HYCYLC++ VRRSSQH+GPKGCKQHTVG
Sbjct: 822 QINVKVGNNNHIFCWSCQSHYCYLCKEIVRRSSQHFGPKGCKQHTVG 868


>emb|CBI33855.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  100 bits (250), Expect = 1e-19
 Identities = 40/47 (85%), Positives = 45/47 (95%)
 Frame = -2

Query: 393 QMNAKVGNNNHIFCWSCQNHYCYLCRKKVRRSSQHYGPKGCKQHTVG 253
           Q+N KVGNNNHIFCWSCQ+HYCYLC++ VRRSSQH+GPKGCKQHTVG
Sbjct: 616 QINVKVGNNNHIFCWSCQSHYCYLCKEIVRRSSQHFGPKGCKQHTVG 662


>ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|222833857|gb|EEE72334.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score =  100 bits (249), Expect = 1e-19
 Identities = 41/48 (85%), Positives = 42/48 (87%)
 Frame = -2

Query: 396 GQMNAKVGNNNHIFCWSCQNHYCYLCRKKVRRSSQHYGPKGCKQHTVG 253
           GQ N KVGNNNHI CWSCQ HYCYLCRK VRR SQH+GPKGCKQHTVG
Sbjct: 595 GQFNVKVGNNNHILCWSCQMHYCYLCRKIVRRGSQHFGPKGCKQHTVG 642


>ref|XP_002893719.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339561|gb|EFH69978.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 682

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = -2

Query: 393 QMNAKVGNNNHIFCWSCQNHYCYLCRKKVRRSSQHYGPKGCKQHTVG 253
           Q NAK GNNNH+FCW+CQ H+CYLC+K V++S+QHYGPKGCKQHT G
Sbjct: 636 QFNAKAGNNNHLFCWACQAHFCYLCKKVVKKSAQHYGPKGCKQHTDG 682


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