BLASTX nr result

ID: Coptis25_contig00011619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011619
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl...   271   1e-70
gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2...   271   1e-70
ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ...   271   1e-70
dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]                      271   1e-70
ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly...   265   1e-68

>ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera]
           gi|296089917|emb|CBI39736.3| unnamed protein product
           [Vitis vinifera]
          Length = 522

 Score =  271 bits (693), Expect = 1e-70
 Identities = 142/204 (69%), Positives = 161/204 (78%), Gaps = 3/204 (1%)
 Frame = -1

Query: 605 NKRNDST--LFSHRFGLAPGSLRRNNSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVD 432
           N RN S   LF H       S+  NN  + SM   E S+S  LE+   +RVPIFVMMPVD
Sbjct: 33  NLRNVSMIPLFKHNGLFIWRSIAANNC-IFSMDAREKSRSTTLETPGHKRVPIFVMMPVD 91

Query: 431 ALGIDTSGVPQIRKVKALTMSLKALKLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFK 252
           + GIDTSG P+IR++KALT+SLKALKLAGVHGI VEVWWGIVER SPF YNWS+YE+LFK
Sbjct: 92  SFGIDTSGAPRIRRIKALTISLKALKLAGVHGIAVEVWWGIVERFSPFVYNWSLYEELFK 151

Query: 251 LISGSGLKLHVSLCFHSN-EQSFNGKGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLT 75
           LIS SGLKLHV+L FHSN   S   KGGVSLPLWI+EIG L+ DIYYRDQNGFSN+DYLT
Sbjct: 152 LISESGLKLHVALSFHSNMHSSSRVKGGVSLPLWIVEIGDLNKDIYYRDQNGFSNDDYLT 211

Query: 74  LGVDQIPLFSGRTALQCYEDFMYS 3
           LGVD++PLF GRTALQCYEDFM+S
Sbjct: 212 LGVDELPLFCGRTALQCYEDFMFS 235


>gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana]
           gi|25054836|gb|AAN71908.1| putative beta-amylase
           [Arabidopsis thaliana]
          Length = 484

 Score =  271 bits (692), Expect = 1e-70
 Identities = 126/178 (70%), Positives = 151/178 (84%)
 Frame = -1

Query: 536 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 357
           NSR+ SM   E S+S VL S + +RVP+FVMMP+D  GID SG P+I+++KALT+SLKAL
Sbjct: 20  NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKAL 79

Query: 356 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNGK 177
           KLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LCFHSN   F GK
Sbjct: 80  KLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 139

Query: 176 GGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTLGVDQIPLFSGRTALQCYEDFMYS 3
           GG+SLPLWI EIG ++ DIYYRD++GFSNNDYLTLGVDQ+PLF GRTA+QCYEDFM S
Sbjct: 140 GGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLS 197


>ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana]
           gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName:
           Full=Inactive beta-amylase 4, chloroplastic; AltName:
           Full=Inactive beta-amylase 6; Flags: Precursor
           gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis
           thaliana] gi|332009286|gb|AED96669.1| inactive
           beta-amylase 4 [Arabidopsis thaliana]
          Length = 531

 Score =  271 bits (692), Expect = 1e-70
 Identities = 126/178 (70%), Positives = 151/178 (84%)
 Frame = -1

Query: 536 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 357
           NSR+ SM   E S+S VL S + +RVP+FVMMP+D  GID SG P+I+++KALT+SLKAL
Sbjct: 67  NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKAL 126

Query: 356 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNGK 177
           KLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LCFHSN   F GK
Sbjct: 127 KLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 186

Query: 176 GGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTLGVDQIPLFSGRTALQCYEDFMYS 3
           GG+SLPLWI EIG ++ DIYYRD++GFSNNDYLTLGVDQ+PLF GRTA+QCYEDFM S
Sbjct: 187 GGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLS 244


>dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]
          Length = 498

 Score =  271 bits (692), Expect = 1e-70
 Identities = 126/178 (70%), Positives = 151/178 (84%)
 Frame = -1

Query: 536 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 357
           NSR+ SM   E S+S VL S + +RVP+FVMMP+D  GID SG P+I+++KALT+SLKAL
Sbjct: 34  NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKAL 93

Query: 356 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNGK 177
           KLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LCFHSN   F GK
Sbjct: 94  KLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 153

Query: 176 GGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTLGVDQIPLFSGRTALQCYEDFMYS 3
           GG+SLPLWI EIG ++ DIYYRD++GFSNNDYLTLGVDQ+PLF GRTA+QCYEDFM S
Sbjct: 154 GGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLS 211


>ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 531

 Score =  265 bits (676), Expect = 1e-68
 Identities = 124/178 (69%), Positives = 147/178 (82%)
 Frame = -1

Query: 536 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 357
           NSR+ SM   E S+S VL S + +RVP+FVMMP D  GID SG P+I+++KALT+SLKAL
Sbjct: 67  NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPFDTFGIDASGCPKIKRLKALTVSLKAL 126

Query: 356 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNGK 177
           KLAGVHGI VEVWWGIVER  P ++ WS+YE+LF+LIS +GLKLHV+LCFHSN   F GK
Sbjct: 127 KLAGVHGIAVEVWWGIVERFCPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 186

Query: 176 GGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTLGVDQIPLFSGRTALQCYEDFMYS 3
           GG+SLPLWI EIG ++ DIYYRD+ G SNNDYLTLGVDQ+PLF GRTA+QCYEDFM S
Sbjct: 187 GGISLPLWIREIGDVNKDIYYRDKRGLSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLS 244


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