BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011605
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ...    92   6e-17
dbj|BAM36209.1| NADH dehydrogenase subunit 4 (mitochondrion) [Ra...    63   2e-08
ref|YP_005090381.1| NADH dehydrogenase subunit 4 (mitochondrion)...    63   2e-08
ref|YP_004927572.1| nad4 (mitochondrion) [Brassica carinata] gi|...    63   2e-08
gb|AEK01315.1| nad4 [Arabidopsis thaliana]                             63   2e-08

>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
           gi|355477312|gb|AES58515.1| hypothetical protein
           MTR_1g005050 [Medicago truncatula]
          Length = 334

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/100 (52%), Positives = 55/100 (55%)
 Frame = +1

Query: 118 WPTPPKSAYVIWELMAGNNPYGFDIR*E**EKSPGWLVSLVIGDYLAWFGEHLLGFFVAK 297
           WP+PPKSAYVIWELM                +SPGWLVSLVIGDYLAWFGEHLL      
Sbjct: 276 WPSPPKSAYVIWELM---------------NQSPGWLVSLVIGDYLAWFGEHLL------ 314

Query: 298 CYGLNAELLTLLVRMGVHPKVFLDCMHTSVSNLVQHGKFH 417
                               VF D MHT VSNLVQHGKF+
Sbjct: 315 --------------------VFPDRMHTYVSNLVQHGKFN 334


>dbj|BAM36209.1| NADH dehydrogenase subunit 4 (mitochondrion) [Raphanus sativus]
          Length = 495

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +1

Query: 331 LVRMGVHPKVFLDCMHTSVSNLVQHGKFH 417
           LVRMGVHPKVF DCMHTSVSNLVQHGKFH
Sbjct: 467 LVRMGVHPKVFPDCMHTSVSNLVQHGKFH 495


>ref|YP_005090381.1| NADH dehydrogenase subunit 4 (mitochondrion) [Phoenix dactylifera]
           gi|343478433|gb|AEM43921.1| NADH dehydrogenase subunit 4
           (mitochondrion) [Phoenix dactylifera]
          Length = 495

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +1

Query: 331 LVRMGVHPKVFLDCMHTSVSNLVQHGKFH 417
           LVRMGVHPKVF DCMHTSVSNLVQHGKFH
Sbjct: 467 LVRMGVHPKVFPDCMHTSVSNLVQHGKFH 495


>ref|YP_004927572.1| nad4 (mitochondrion) [Brassica carinata]
           gi|335355033|gb|AEH43587.1| nad4 [Brassica carinata]
          Length = 495

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +1

Query: 331 LVRMGVHPKVFLDCMHTSVSNLVQHGKFH 417
           LVRMGVHPKVF DCMHTSVSNLVQHGKFH
Sbjct: 467 LVRMGVHPKVFPDCMHTSVSNLVQHGKFH 495


>gb|AEK01315.1| nad4 [Arabidopsis thaliana]
          Length = 493

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +1

Query: 331 LVRMGVHPKVFLDCMHTSVSNLVQHGKFH 417
           LVRMGVHPKVF DCMHTSVSNLVQHGKFH
Sbjct: 465 LVRMGVHPKVFPDCMHTSVSNLVQHGKFH 493