BLASTX nr result

ID: Coptis25_contig00011604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011604
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146261.1| PREDICTED: transmembrane 9 superfamily membe...   352   5e-95
ref|XP_002530674.1| endomembrane protein emp70, putative [Ricinu...   347   2e-93
ref|NP_563881.1| transmembrane nine 1 [Arabidopsis thaliana] gi|...   345   1e-92
ref|XP_002889842.1| hypothetical protein ARALYDRAFT_471233 [Arab...   343   3e-92
ref|XP_002269498.1| PREDICTED: transmembrane 9 superfamily membe...   342   7e-92

>ref|XP_004146261.1| PREDICTED: transmembrane 9 superfamily member 3-like [Cucumis
           sativus] gi|449495547|ref|XP_004159874.1| PREDICTED:
           transmembrane 9 superfamily member 3-like [Cucumis
           sativus]
          Length = 593

 Score =  352 bits (904), Expect = 5e-95
 Identities = 163/228 (71%), Positives = 187/228 (82%), Gaps = 2/228 (0%)
 Frame = +3

Query: 246 STVRFFYIFICLVIVPPLTFASESDHKYQQEDKVTLWVNKVGPYNNPQETYNYYSLPFCH 425
           S+V FF+    L+    +  ASESDHKY Q++ VTLWVNKVGPYNNPQETYNYYSLPFCH
Sbjct: 8   SSVTFFFFSSLLISSLSIVLASESDHKYLQDESVTLWVNKVGPYNNPQETYNYYSLPFCH 67

Query: 426 LSGYAGHKWXXXXXXXXXXXXIDSQIEIKFQKNVDKSTICELQLDAAKVKQFKDAIENTY 605
            SG++ HKW            IDSQIEIKFQKNV+++TIC+L+LD +KVKQFKDAIEN Y
Sbjct: 68  PSGHSAHKWGGLGEVLGGNELIDSQIEIKFQKNVERTTICQLELDESKVKQFKDAIENGY 127

Query: 606 WFEFFIDDLPLWGFVGELHTKNNEN--KHVLYTHKNINVRYHGDQIIHVNLTQENPKPLE 779
           WFEFF+DDLPLWGFVGELH   N N  KHVLYTHKNI ++Y+ DQIIHVNLTQEN KPLE
Sbjct: 128 WFEFFMDDLPLWGFVGELHPDKNSNNVKHVLYTHKNIIIKYNKDQIIHVNLTQENLKPLE 187

Query: 780 VGKKLDMSYSVRWIPTNITFERRFDVYLDYPFFEHQIHWFSIFNSFMM 923
           VGK LD++Y+V+WI TN+TF RRFD+YLDYPFFEHQIHWFSIFNSFMM
Sbjct: 188 VGKTLDLTYAVKWISTNVTFARRFDIYLDYPFFEHQIHWFSIFNSFMM 235


>ref|XP_002530674.1| endomembrane protein emp70, putative [Ricinus communis]
           gi|223529767|gb|EEF31705.1| endomembrane protein emp70,
           putative [Ricinus communis]
          Length = 602

 Score =  347 bits (890), Expect = 2e-93
 Identities = 161/222 (72%), Positives = 186/222 (83%), Gaps = 2/222 (0%)
 Frame = +3

Query: 264 YIFICLVIVPPLTFASESDHKYQQEDKVTLWVNKVGPYNNPQETYNYYSLPFCHLSGYAG 443
           + FI L+++     ASESDHKYQQ++ VTLWVNK+GPYNNPQETYNYYSLPFCH SG AG
Sbjct: 23  FAFISLILLLSPVLASESDHKYQQDESVTLWVNKIGPYNNPQETYNYYSLPFCHPSGSAG 82

Query: 444 HKWXXXXXXXXXXXXIDSQIEIKFQKNVDKSTICELQLDAAKVKQFKDAIENTYWFEFFI 623
           HKW            IDS+I+IKFQKNV++ TIC L+LD A+VK FKDAIEN YWFEFF+
Sbjct: 83  HKWGGLGEVLGGNELIDSKIDIKFQKNVERGTICSLELDEARVKIFKDAIENNYWFEFFM 142

Query: 624 DDLPLWGFVGELH-TKNNEN-KHVLYTHKNINVRYHGDQIIHVNLTQENPKPLEVGKKLD 797
           DDLPLWGFVGEL   KN++N KHVLYTHK+I VRY+ DQIIHVNLTQ+NPKPLE G+ +D
Sbjct: 143 DDLPLWGFVGELRPDKNSDNGKHVLYTHKSITVRYNKDQIIHVNLTQDNPKPLETGRIVD 202

Query: 798 MSYSVRWIPTNITFERRFDVYLDYPFFEHQIHWFSIFNSFMM 923
           M+YSV+W+PTNITF RRFDVYLD+PFFEHQIHWFSIFNSFMM
Sbjct: 203 MTYSVKWLPTNITFARRFDVYLDHPFFEHQIHWFSIFNSFMM 244


>ref|NP_563881.1| transmembrane nine 1 [Arabidopsis thaliana]
           gi|17933310|gb|AAL48237.1|AF446365_1 At1g10950/T19D16_13
           [Arabidopsis thaliana] gi|15451172|gb|AAK96857.1|
           endomembrane protein EMP70 precusor isolog [Arabidopsis
           thaliana] gi|17380902|gb|AAL36263.1| putative
           endomembrane protein EMP70 precusor isolog [Arabidopsis
           thaliana] gi|20148415|gb|AAM10098.1| endomembrane
           protein EMP70 precusor isolog [Arabidopsis thaliana]
           gi|30793947|gb|AAP40425.1| putative endomembrane protein
           70 [Arabidopsis thaliana] gi|332190547|gb|AEE28668.1|
           transmembrane nine 1 [Arabidopsis thaliana]
          Length = 589

 Score =  345 bits (884), Expect = 1e-92
 Identities = 162/221 (73%), Positives = 185/221 (83%), Gaps = 2/221 (0%)
 Frame = +3

Query: 267 IFICLVIVPPLTFASESDHKYQQEDKVTLWVNKVGPYNNPQETYNYYSLPFCHLSGYAGH 446
           +F+ LV +   TFAS+SDHKYQ E++VTLWVNKVGPYNNPQETYNYYSLPFC  SG   H
Sbjct: 11  VFLLLVSLLTPTFASDSDHKYQAEEQVTLWVNKVGPYNNPQETYNYYSLPFCRPSGNNVH 70

Query: 447 KWXXXXXXXXXXXXIDSQIEIKFQKNVDKSTICELQLDAAKVKQFKDAIENTYWFEFFID 626
           KW            IDS+I IKF KNV++S IC L+LD AKVK FKDAIE++YWFEFF+D
Sbjct: 71  KWGGLGEVLGGNELIDSEIAIKFMKNVERSVICPLELDEAKVKHFKDAIESSYWFEFFMD 130

Query: 627 DLPLWGFVGELH-TKNNEN-KHVLYTHKNINVRYHGDQIIHVNLTQENPKPLEVGKKLDM 800
           DLPLWGFVGELH  KN+EN KHVLYTHKNI V+Y+ DQIIHVNLTQ+NP+PLE GKK+D+
Sbjct: 131 DLPLWGFVGELHPDKNSENGKHVLYTHKNIVVKYNKDQIIHVNLTQDNPRPLEAGKKMDL 190

Query: 801 SYSVRWIPTNITFERRFDVYLDYPFFEHQIHWFSIFNSFMM 923
           +YSV+WIPTN+TF RRFDVYLDYPFFEHQIHWFSIFNSFMM
Sbjct: 191 TYSVQWIPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMM 231


>ref|XP_002889842.1| hypothetical protein ARALYDRAFT_471233 [Arabidopsis lyrata subsp.
           lyrata] gi|297335684|gb|EFH66101.1| hypothetical protein
           ARALYDRAFT_471233 [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  343 bits (880), Expect = 3e-92
 Identities = 161/221 (72%), Positives = 185/221 (83%), Gaps = 2/221 (0%)
 Frame = +3

Query: 267 IFICLVIVPPLTFASESDHKYQQEDKVTLWVNKVGPYNNPQETYNYYSLPFCHLSGYAGH 446
           +F+ LV +   TFAS+SDHKYQ +++VTLWVNKVGPYNNPQETYNYYSLPFC  SG   H
Sbjct: 10  VFLLLVSLLTPTFASDSDHKYQADEQVTLWVNKVGPYNNPQETYNYYSLPFCRPSGNNVH 69

Query: 447 KWXXXXXXXXXXXXIDSQIEIKFQKNVDKSTICELQLDAAKVKQFKDAIENTYWFEFFID 626
           KW            IDS+I IKF KNVD++ IC L+LD AKVK FKDAIE++YWFEFF+D
Sbjct: 70  KWGGLGEVLGGNELIDSEIAIKFLKNVDRNVICPLELDEAKVKHFKDAIESSYWFEFFMD 129

Query: 627 DLPLWGFVGELH-TKNNEN-KHVLYTHKNINVRYHGDQIIHVNLTQENPKPLEVGKKLDM 800
           DLPLWGFVGELH  KN+EN KHVLYTHKNI V+Y+ DQIIHVNLTQ+NP+PLE GKK+D+
Sbjct: 130 DLPLWGFVGELHPDKNSENGKHVLYTHKNIVVKYNKDQIIHVNLTQDNPRPLEAGKKMDL 189

Query: 801 SYSVRWIPTNITFERRFDVYLDYPFFEHQIHWFSIFNSFMM 923
           +YSV+WIPTN+TF RRFDVYLDYPFFEHQIHWFSIFNSFMM
Sbjct: 190 TYSVQWIPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMM 230


>ref|XP_002269498.1| PREDICTED: transmembrane 9 superfamily member 3 [Vitis vinifera]
           gi|297739584|emb|CBI29766.3| unnamed protein product
           [Vitis vinifera]
          Length = 592

 Score =  342 bits (877), Expect = 7e-92
 Identities = 156/220 (70%), Positives = 181/220 (82%), Gaps = 1/220 (0%)
 Frame = +3

Query: 267 IFICLVIVPPLTFASESDHKYQQEDKVTLWVNKVGPYNNPQETYNYYSLPFCHLSGYAGH 446
           +++ L+++     AS+ DHKYQQ + VTLWVNKVGPYNNPQETYNYYSLPFC   G A H
Sbjct: 15  LYLALLLLLSPASASDYDHKYQQNEPVTLWVNKVGPYNNPQETYNYYSLPFCRPPGKAVH 74

Query: 447 KWXXXXXXXXXXXXIDSQIEIKFQKNVDKSTICELQLDAAKVKQFKDAIENTYWFEFFID 626
           KW            I+SQI+IKFQKNVDK  IC+L+LD AKVKQFKDAIEN YW EFF+D
Sbjct: 75  KWIGLGELLGGNELIESQIDIKFQKNVDKGVICQLELDEAKVKQFKDAIENNYWLEFFVD 134

Query: 627 DLPLWGFVGELH-TKNNENKHVLYTHKNINVRYHGDQIIHVNLTQENPKPLEVGKKLDMS 803
           DLPLWGFVGELH  KN++NKHVL+THKNIN+ Y+ +QIIHVNL+QENPKP+E G+ LDM+
Sbjct: 135 DLPLWGFVGELHPDKNSDNKHVLFTHKNINITYNKNQIIHVNLSQENPKPMEAGRTLDMT 194

Query: 804 YSVRWIPTNITFERRFDVYLDYPFFEHQIHWFSIFNSFMM 923
           YSV+WIPT +TF RRFDVYLDYPFFEHQIHWFSIFNSFMM
Sbjct: 195 YSVKWIPTTVTFARRFDVYLDYPFFEHQIHWFSIFNSFMM 234


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