BLASTX nr result
ID: Coptis25_contig00011600
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011600
(935 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275878.2| PREDICTED: uncharacterized protein LOC100251... 186 1e-72
emb|CAN59914.1| hypothetical protein VITISV_006086 [Vitis vinifera] 186 1e-72
emb|CBI24237.3| unnamed protein product [Vitis vinifera] 173 1e-68
ref|XP_002530898.1| transcription factor, putative [Ricinus comm... 165 2e-65
ref|XP_003545161.1| PREDICTED: uncharacterized protein LOC100817... 167 5e-64
>ref|XP_002275878.2| PREDICTED: uncharacterized protein LOC100251674 [Vitis vinifera]
Length = 445
Score = 186 bits (473), Expect(3) = 1e-72
Identities = 103/190 (54%), Positives = 121/190 (63%), Gaps = 11/190 (5%)
Frame = -3
Query: 855 LGVGVGIIPLH------GPASMNIEDDEDINLNTSRSQGGGGIQLWQNQHSHQADYLKKP 694
+GVGVG+IPL P+SM D+ D+ + S+ GGGIQ WQNQ + A+YLKKP
Sbjct: 145 VGVGVGVIPLLTAAPCLAPSSMGGVDEADMLGHRSK---GGGIQFWQNQQTQHANYLKKP 201
Query: 693 IVYDQNNSMNLLNASGSGGTNANTSTA----TCQDCGNQAKKDCSHRRCRTCCKSRGYDC 526
++ D N+S NLL+ G GG A+ T TCQDCGNQAKKDCSHRRCRTCCKSRG+DC
Sbjct: 202 MILDHNSSSNLLSC-GVGGVGASGPTTAGGTTCQDCGNQAKKDCSHRRCRTCCKSRGFDC 260
Query: 525 ATHIKSTWVPAARRRERHQLXXXXXXXXXXXXXXXVKKPRLI-NXXXXXXXXXXXXXTPP 349
ATH+KSTWVPAARRRER + KKPRLI + TPP
Sbjct: 261 ATHVKSTWVPAARRRERQLMVSVTPGAGSSGSTSGAKKPRLITSQTTTTSHTSTSNTTPP 320
Query: 348 RSFDTSSSHQ 319
RSFDTSSSHQ
Sbjct: 321 RSFDTSSSHQ 330
Score = 84.0 bits (206), Expect(3) = 1e-72
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -2
Query: 244 DASFKEALPGQVRVPAVLKCVRVTAIGDGEDEYAYQAVVKIGGMCLRDF 98
DASFKEALPGQVR PAV KCVRVTA+ DGEDEYAYQAVVKIGG + F
Sbjct: 331 DASFKEALPGQVRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGF 379
Score = 51.2 bits (121), Expect(3) = 1e-72
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -1
Query: 113 VFKGFLYDQGMEGREGFPNISELHL 39
VFKGFLYDQG+E R+GFPNISELHL
Sbjct: 375 VFKGFLYDQGLETRDGFPNISELHL 399
>emb|CAN59914.1| hypothetical protein VITISV_006086 [Vitis vinifera]
Length = 356
Score = 186 bits (473), Expect(3) = 1e-72
Identities = 103/190 (54%), Positives = 121/190 (63%), Gaps = 11/190 (5%)
Frame = -3
Query: 855 LGVGVGIIPLH------GPASMNIEDDEDINLNTSRSQGGGGIQLWQNQHSHQADYLKKP 694
+GVGVG+IPL P+SM D+ D+ + S+ GGGIQ WQNQ + A+YLKKP
Sbjct: 61 VGVGVGVIPLLTAAPCLAPSSMGGVDEADMLGHRSK---GGGIQFWQNQQTQHANYLKKP 117
Query: 693 IVYDQNNSMNLLNASGSGGTNANTSTA----TCQDCGNQAKKDCSHRRCRTCCKSRGYDC 526
++ D N+S NLL+ G GG A+ T TCQDCGNQAKKDCSHRRCRTCCKSRG+DC
Sbjct: 118 MILDHNSSSNLLSC-GVGGVGASGPTTAGGTTCQDCGNQAKKDCSHRRCRTCCKSRGFDC 176
Query: 525 ATHIKSTWVPAARRRERHQLXXXXXXXXXXXXXXXVKKPRLI-NXXXXXXXXXXXXXTPP 349
ATH+KSTWVPAARRRER + KKPRLI + TPP
Sbjct: 177 ATHVKSTWVPAARRRERQLMVSVTPGAGSSGSTSGAKKPRLITSQTTTTSHTSTSNTTPP 236
Query: 348 RSFDTSSSHQ 319
RSFDTSSSHQ
Sbjct: 237 RSFDTSSSHQ 246
Score = 84.0 bits (206), Expect(3) = 1e-72
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -2
Query: 244 DASFKEALPGQVRVPAVLKCVRVTAIGDGEDEYAYQAVVKIGGMCLRDF 98
DASFKEALPGQVR PAV KCVRVTA+ DGEDEYAYQAVVKIGG + F
Sbjct: 247 DASFKEALPGQVRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGF 295
Score = 51.2 bits (121), Expect(3) = 1e-72
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -1
Query: 113 VFKGFLYDQGMEGREGFPNISELHL 39
VFKGFLYDQG+E R+GFPNISELHL
Sbjct: 291 VFKGFLYDQGLETRDGFPNISELHL 315
>emb|CBI24237.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 173 bits (438), Expect(3) = 1e-68
Identities = 89/151 (58%), Positives = 100/151 (66%), Gaps = 5/151 (3%)
Frame = -3
Query: 756 GGGIQLWQNQHSHQADYLKKPIVYDQNNSMNLLNASGSGGTNANTSTA----TCQDCGNQ 589
GGGIQ WQNQ + A+YLKKP++ D N+S NLL+ G GG A+ T TCQDCGNQ
Sbjct: 49 GGGIQFWQNQQTQHANYLKKPMILDHNSSSNLLSC-GVGGVGASGPTTAGGTTCQDCGNQ 107
Query: 588 AKKDCSHRRCRTCCKSRGYDCATHIKSTWVPAARRRERHQLXXXXXXXXXXXXXXXVKKP 409
AKKDCSHRRCRTCCKSRG+DCATH+KSTWVPAARRRER + KKP
Sbjct: 108 AKKDCSHRRCRTCCKSRGFDCATHVKSTWVPAARRRERQLMVSVTPGAGSSGSTSGAKKP 167
Query: 408 RLI-NXXXXXXXXXXXXXTPPRSFDTSSSHQ 319
RLI + TPPRSFDTSSSHQ
Sbjct: 168 RLITSQTTTTSHTSTSNTTPPRSFDTSSSHQ 198
Score = 84.0 bits (206), Expect(3) = 1e-68
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -2
Query: 244 DASFKEALPGQVRVPAVLKCVRVTAIGDGEDEYAYQAVVKIGGMCLRDF 98
DASFKEALPGQVR PAV KCVRVTA+ DGEDEYAYQAVVKIGG + F
Sbjct: 199 DASFKEALPGQVRAPAVFKCVRVTAVDDGEDEYAYQAVVKIGGHVFKGF 247
Score = 51.2 bits (121), Expect(3) = 1e-68
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -1
Query: 113 VFKGFLYDQGMEGREGFPNISELHL 39
VFKGFLYDQG+E R+GFPNISELHL
Sbjct: 243 VFKGFLYDQGLETRDGFPNISELHL 267
>ref|XP_002530898.1| transcription factor, putative [Ricinus communis]
gi|223529520|gb|EEF31474.1| transcription factor,
putative [Ricinus communis]
Length = 344
Score = 165 bits (418), Expect(3) = 2e-65
Identities = 99/189 (52%), Positives = 115/189 (60%), Gaps = 10/189 (5%)
Frame = -3
Query: 855 LGVGVGIIPLHGPASMNIEDDEDINLNTSRSQGGGGIQLWQNQHSHQADYLKKPIVYDQN 676
+GVGVG+IPL A ++ DD+D+ LN RS GIQ WQNQ+ + + D N
Sbjct: 43 VGVGVGVIPLLTAAPCHM-DDQDL-LNNGRSNKISGIQFWQNQNQYNNIKKTTGSILDHN 100
Query: 675 N-SMNLL----NASGSG--GTNANTSTATCQDCGNQAKKDCSHRRCRTCCKSRGYDCATH 517
S NLL N SG G G N+ +S +CQDCGNQAKKDC+HRRCRTCCKSRGYDCATH
Sbjct: 101 TCSANLLQSGNNTSGGGVVGANSASSGTSCQDCGNQAKKDCTHRRCRTCCKSRGYDCATH 160
Query: 516 IKSTWVPAARRRERHQL--XXXXXXXXXXXXXXXVKKPRLIN-XXXXXXXXXXXXXTPPR 346
+KSTWVPAARRRER + VKKPRL+N TPPR
Sbjct: 161 VKSTWVPAARRRERQLMVSTAIGGGTGSSVSTSGVKKPRLLNSQTTTTSHTSTSNTTPPR 220
Query: 345 SFDTSSSHQ 319
SFDTSSSHQ
Sbjct: 221 SFDTSSSHQ 229
Score = 81.6 bits (200), Expect(3) = 2e-65
Identities = 39/49 (79%), Positives = 41/49 (83%)
Frame = -2
Query: 244 DASFKEALPGQVRVPAVLKCVRVTAIGDGEDEYAYQAVVKIGGMCLRDF 98
D SFKEALPGQVR PAV KCVRVTA+ DGEDEYAYQAVVKIGG + F
Sbjct: 230 DVSFKEALPGQVRAPAVFKCVRVTAMDDGEDEYAYQAVVKIGGHVFKGF 278
Score = 50.8 bits (120), Expect(3) = 2e-65
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -1
Query: 113 VFKGFLYDQGMEGREGFPNISELHL 39
VFKGFLYDQG+E R+GFPNISELHL
Sbjct: 274 VFKGFLYDQGVETRDGFPNISELHL 298
>ref|XP_003545161.1| PREDICTED: uncharacterized protein LOC100817745 [Glycine max]
Length = 415
Score = 167 bits (422), Expect(3) = 5e-64
Identities = 100/191 (52%), Positives = 121/191 (63%), Gaps = 10/191 (5%)
Frame = -3
Query: 861 TALGVGVGIIPLHGPASMNIEDDEDINLNTSRSQGGGGIQLWQNQHSH-QADYLKKPI-- 691
TALGVGVG+IPL A+ +E D N+ SR++GGGGIQLWQ+Q H Q+ Y+KK +
Sbjct: 115 TALGVGVGVIPLLA-ATPCLESDN--NILGSRTRGGGGIQLWQDQQQHHQSHYMKKQLQQ 171
Query: 690 -VYDQNN---SMNLLNASGSGGTNANTSTAT-CQDCGNQAKKDCSHRRCRTCCKSRGYDC 526
+ D N+ S NL+ SG + +S T CQDCGNQAKKDC++RRCRTCCKSRG+DC
Sbjct: 172 GLLDHNSNTSSGNLIQNSGEVTASGTSSGGTTCQDCGNQAKKDCTNRRCRTCCKSRGFDC 231
Query: 525 ATHIKSTWVPAARRRERHQL-XXXXXXXXXXXXXXXVKKPRLI-NXXXXXXXXXXXXXTP 352
TH+KSTWVPAARRRER + KKPRLI + TP
Sbjct: 232 PTHVKSTWVPAARRRERQLMTSATAAVAGSSGSTSGTKKPRLIASQTTTTSHTSTSNTTP 291
Query: 351 PRSFDTSSSHQ 319
PRSFDTSSSHQ
Sbjct: 292 PRSFDTSSSHQ 302
Score = 79.7 bits (195), Expect(3) = 5e-64
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = -2
Query: 244 DASFKEALPGQVRVPAVLKCVRVTAIGDGEDEYAYQAVVKIGGMCLRDF 98
DA FKE+LPGQVR PAV KCVRVTA+ DG+DEYAYQAVVKIGG + F
Sbjct: 303 DAGFKESLPGQVRAPAVFKCVRVTAVEDGQDEYAYQAVVKIGGHVFKGF 351
Score = 46.2 bits (108), Expect(3) = 5e-64
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = -1
Query: 113 VFKGFLYDQGMEGREGFPNISELHL 39
VFKGFLYDQG+E R+ +PN+SELHL
Sbjct: 347 VFKGFLYDQGVENRDVYPNLSELHL 371