BLASTX nr result

ID: Coptis25_contig00011593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011593
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155432.1| PREDICTED: rab GDP dissociation inhibitor al...   178   5e-43
ref|XP_004137066.1| PREDICTED: rab GDP dissociation inhibitor al...   178   5e-43
ref|XP_002533685.1| protein with unknown function [Ricinus commu...   175   4e-42
ref|XP_003635640.1| PREDICTED: rab GDP-dissociation inhibitor-li...   171   4e-41
emb|CBI29595.3| unnamed protein product [Vitis vinifera]              171   4e-41

>ref|XP_004155432.1| PREDICTED: rab GDP dissociation inhibitor alpha-like [Cucumis
           sativus]
          Length = 445

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/95 (86%), Positives = 87/95 (91%)
 Frame = +2

Query: 2   YLFCCSYTHNVAPKGKYIAFVSTEAETDQPEAELKPGIELLGPVDEIFYEIYDRYEPINN 181
           YLFCCSY HNVAPKGK+IAFVSTEAETD PE ELKPGI+LLGPVDEIFYE YDRY PINN
Sbjct: 334 YLFCCSYAHNVAPKGKFIAFVSTEAETDNPEVELKPGIDLLGPVDEIFYETYDRYVPINN 393

Query: 182 HDEDHCFISESYDGTTHFESTVQDVLAMYSKITGK 286
           H+ D+CFIS SYDG+THFESTV DVLAMYSKITGK
Sbjct: 394 HETDNCFISTSYDGSTHFESTVTDVLAMYSKITGK 428


>ref|XP_004137066.1| PREDICTED: rab GDP dissociation inhibitor alpha-like [Cucumis
           sativus]
          Length = 469

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/95 (86%), Positives = 87/95 (91%)
 Frame = +2

Query: 2   YLFCCSYTHNVAPKGKYIAFVSTEAETDQPEAELKPGIELLGPVDEIFYEIYDRYEPINN 181
           YLFCCSY HNVAPKGK+IAFVSTEAETD PE ELKPGI+LLGPVDEIFYE YDRY PINN
Sbjct: 358 YLFCCSYAHNVAPKGKFIAFVSTEAETDNPEVELKPGIDLLGPVDEIFYETYDRYVPINN 417

Query: 182 HDEDHCFISESYDGTTHFESTVQDVLAMYSKITGK 286
           H+ D+CFIS SYDG+THFESTV DVLAMYSKITGK
Sbjct: 418 HETDNCFISTSYDGSTHFESTVTDVLAMYSKITGK 452


>ref|XP_002533685.1| protein with unknown function [Ricinus communis]
           gi|223526420|gb|EEF28701.1| protein with unknown
           function [Ricinus communis]
          Length = 445

 Score =  175 bits (443), Expect = 4e-42
 Identities = 78/95 (82%), Positives = 87/95 (91%)
 Frame = +2

Query: 2   YLFCCSYTHNVAPKGKYIAFVSTEAETDQPEAELKPGIELLGPVDEIFYEIYDRYEPINN 181
           YLFCCSYTHNVAPKGKYIAFV+TEAETD P+ ELKPG++LLGPVDE+F+E YDRYEP N 
Sbjct: 334 YLFCCSYTHNVAPKGKYIAFVTTEAETDDPQTELKPGLDLLGPVDEMFFETYDRYEPTNQ 393

Query: 182 HDEDHCFISESYDGTTHFESTVQDVLAMYSKITGK 286
           HD D+CFIS SYD TTHFE+TVQDV+AMYSKITGK
Sbjct: 394 HDVDNCFISTSYDATTHFETTVQDVIAMYSKITGK 428


>ref|XP_003635640.1| PREDICTED: rab GDP-dissociation inhibitor-like, partial [Vitis
           vinifera]
          Length = 154

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/95 (82%), Positives = 86/95 (90%)
 Frame = +2

Query: 2   YLFCCSYTHNVAPKGKYIAFVSTEAETDQPEAELKPGIELLGPVDEIFYEIYDRYEPINN 181
           YLFCCSY+HNVAPKGKYIAFV+TEAETD PE ELKPGIELLG VDEIF++ YDRYEP N 
Sbjct: 43  YLFCCSYSHNVAPKGKYIAFVTTEAETDNPEIELKPGIELLGQVDEIFFDAYDRYEPANK 102

Query: 182 HDEDHCFISESYDGTTHFESTVQDVLAMYSKITGK 286
            DED+CFIS SYD TTHFESTV+DV+AMYS+ITGK
Sbjct: 103 QDEDNCFISTSYDATTHFESTVEDVIAMYSRITGK 137


>emb|CBI29595.3| unnamed protein product [Vitis vinifera]
          Length = 141

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/95 (82%), Positives = 86/95 (90%)
 Frame = +2

Query: 2   YLFCCSYTHNVAPKGKYIAFVSTEAETDQPEAELKPGIELLGPVDEIFYEIYDRYEPINN 181
           YLFCCSY+HNVAPKGKYIAFV+TEAETD PE ELKPGIELLG VDEIF++ YDRYEP N 
Sbjct: 30  YLFCCSYSHNVAPKGKYIAFVTTEAETDNPEIELKPGIELLGQVDEIFFDAYDRYEPANK 89

Query: 182 HDEDHCFISESYDGTTHFESTVQDVLAMYSKITGK 286
            DED+CFIS SYD TTHFESTV+DV+AMYS+ITGK
Sbjct: 90  QDEDNCFISTSYDATTHFESTVEDVIAMYSRITGK 124


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