BLASTX nr result

ID: Coptis25_contig00011585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011585
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263823.1| PREDICTED: monothiol glutaredoxin-S16, chlor...   395   e-108
ref|XP_002532109.1| glutaredoxin, grx, putative [Ricinus communi...   391   e-106
ref|NP_001234270.1| GRX1 protein [Solanum lycopersicum] gi|30823...   387   e-105
gb|AER93282.1| GRX1 [Nicotiana benthamiana]                           375   e-102
ref|XP_003604721.1| Monothiol glutaredoxin-S16 [Medicago truncat...   362   7e-98

>ref|XP_002263823.1| PREDICTED: monothiol glutaredoxin-S16, chloroplastic [Vitis vinifera]
            gi|296083172|emb|CBI22808.3| unnamed protein product
            [Vitis vinifera]
          Length = 297

 Score =  395 bits (1016), Expect = e-108
 Identities = 203/289 (70%), Positives = 239/289 (82%), Gaps = 4/289 (1%)
 Frame = -1

Query: 1092 STATLNLLTSPTSIFPKITPRLSFSSHLK---TFPSLSLKLTNSKRLSSLTLVSAVKKIS 922
            S ++L LL+S +S   + TP LSF SH K   +F S+SLK   + R  +LT+VSA  K+S
Sbjct: 12   SPSSLRLLSSYSS---QNTPTLSFYSHTKPSLSFSSVSLKPITTARSRTLTVVSAFGKLS 68

Query: 921  ETDNVKVPLESNEISGYFPADSGVYAVFDQNNDLQFIGVSRNIAVSVLSHRKSVSDLCSA 742
            ET+ + +P    EI+G FP++SGVYAV+DQ++ LQFIG++R+IA SVL+HRKSV +LC +
Sbjct: 69   ETEPIPLPPAPEEIAGKFPSESGVYAVYDQSDVLQFIGITRSIAASVLAHRKSVPELCCS 128

Query: 741  VKVGVVDEPDRTTLTEAWKSWMEEHIAATGKVPPGNESGNGIWVKRV-QKKSDLRLTPGR 565
            VKV VVDEPDRT LT+AWKSWMEEHI ATGK+PPGNESGN  WV++  +KK DLRLTPGR
Sbjct: 129  VKVAVVDEPDRTALTQAWKSWMEEHIGATGKIPPGNESGNTTWVRQPPKKKPDLRLTPGR 188

Query: 564  NVQLTVPLEELIDRLVKENKVVAFIKGSRSAPLCGFSQRVVGILESQGADYESVDVLDEE 385
            + QLTVPLE LIDRLVKENKVVAFIKGSRSAPLCGFSQRVVGILES+G DYES+DVLDEE
Sbjct: 189  HTQLTVPLETLIDRLVKENKVVAFIKGSRSAPLCGFSQRVVGILESEGVDYESLDVLDEE 248

Query: 384  HNSGLRDTLKSYSNWPTFPQVFVNGELVGGCDILVSMHEKGELSTLLKK 238
            HN GLR+TLK YSNWPTFPQ+FVNGELVGGCDIL SMHEKGEL  L KK
Sbjct: 249  HNYGLRETLKKYSNWPTFPQIFVNGELVGGCDILTSMHEKGELVGLFKK 297


>ref|XP_002532109.1| glutaredoxin, grx, putative [Ricinus communis]
            gi|223528212|gb|EEF30271.1| glutaredoxin, grx, putative
            [Ricinus communis]
          Length = 307

 Score =  391 bits (1004), Expect = e-106
 Identities = 197/272 (72%), Positives = 233/272 (85%), Gaps = 5/272 (1%)
 Frame = -1

Query: 1038 TPRLSFSSHLKTF---PSLSLKLTNSK-RLSSLTLVSAVKKISETDNVKVPLESNEISGY 871
            TP+LSF SH K F   PS+SLK + +  +   L + +AVK ++ET+ V VPL ++E S  
Sbjct: 36   TPKLSFYSHSKPFLPFPSISLKPSVTVIKPRPLFISAAVKNLTETELVSVPLTADEFSQK 95

Query: 870  FPADSGVYAVFDQNNDLQFIGVSRNIAVSVLSHRKSVSDLCSAVKVGVVDEPDRTTLTEA 691
             P++SGVYAV+D+N+DLQFIG+SR+IA SV SH KSV +LC +VKVGVVDEPDRTTLT+A
Sbjct: 96   LPSESGVYAVYDKNDDLQFIGISRDIAASVFSHLKSVPELCCSVKVGVVDEPDRTTLTQA 155

Query: 690  WKSWMEEHIAATGKVPPGNESGNGIWVKRV-QKKSDLRLTPGRNVQLTVPLEELIDRLVK 514
            WKSW+EEHI  TGKVPPGNESGN  W+K+  +KK+DLRLTPGR+VQLTVPLE+LI+RLVK
Sbjct: 156  WKSWIEEHIKTTGKVPPGNESGNATWIKQPPKKKADLRLTPGRHVQLTVPLEDLIERLVK 215

Query: 513  ENKVVAFIKGSRSAPLCGFSQRVVGILESQGADYESVDVLDEEHNSGLRDTLKSYSNWPT 334
            ENKVVAFIKGSRSAP+CGFSQRVVGILE+QG DYESVDVLDEE+N GLR+TLK YSNWPT
Sbjct: 216  ENKVVAFIKGSRSAPMCGFSQRVVGILENQGVDYESVDVLDEEYNYGLRETLKKYSNWPT 275

Query: 333  FPQVFVNGELVGGCDILVSMHEKGELSTLLKK 238
            FPQVFVNGEL+GGCDIL SMHEKGEL+ LLKK
Sbjct: 276  FPQVFVNGELIGGCDILTSMHEKGELAGLLKK 307


>ref|NP_001234270.1| GRX1 protein [Solanum lycopersicum] gi|308233001|emb|CBI83380.1|
            SlGRX1 protein [Solanum lycopersicum]
          Length = 292

 Score =  387 bits (993), Expect = e-105
 Identities = 194/290 (66%), Positives = 234/290 (80%), Gaps = 6/290 (2%)
 Frame = -1

Query: 1092 STATLNLLTSPTSIFPKITPRLSFSSHLKT---FPSLSL--KLTNSKRLSSLTLVSAVKK 928
            +T  ++ LT P     + TP  S  S  KT   FPS++L  K   + R  +  +V+A+KK
Sbjct: 2    ATFNISFLTQPAIFSSQNTPSFSSYSLPKTSFRFPSITLRPKTRTTTRHHASIVVAALKK 61

Query: 927  ISETDNVKVPLESNEISGYFPADSGVYAVFDQNNDLQFIGVSRNIAVSVLSHRKSVSDLC 748
            +SETD + VPL+S+EI+G FP +SGVYAV+D N DLQF+G+S NIA SV+SH+ S   LC
Sbjct: 62   LSETDPLTVPLQSDEIAGSFPKESGVYAVYDTNGDLQFVGISHNIAASVISHKNSAPQLC 121

Query: 747  SAVKVGVVDEPDRTTLTEAWKSWMEEHIAATGKVPPGNESGNGIWVKRV-QKKSDLRLTP 571
            S+VKVGVV+EPDRT LTE+WKSWMEEHI   GKVPPGNE GN  WV++  +KK+DLRLTP
Sbjct: 122  SSVKVGVVEEPDRTALTESWKSWMEEHITTNGKVPPGNEPGNSTWVRQPPKKKADLRLTP 181

Query: 570  GRNVQLTVPLEELIDRLVKENKVVAFIKGSRSAPLCGFSQRVVGILESQGADYESVDVLD 391
            GRNVQLTVPL++LIDRLVKENKVVAFIKGSRSAP CGFSQRVV ILES+G DYES+DVLD
Sbjct: 182  GRNVQLTVPLQDLIDRLVKENKVVAFIKGSRSAPQCGFSQRVVSILESEGVDYESIDVLD 241

Query: 390  EEHNSGLRDTLKSYSNWPTFPQVFVNGELVGGCDILVSMHEKGELSTLLK 241
            EE+NSGLR+TLK+YSNWPTFPQ+FV GELVGGCDIL SM+EKGEL++L K
Sbjct: 242  EEYNSGLRETLKNYSNWPTFPQIFVKGELVGGCDILTSMYEKGELASLFK 291


>gb|AER93282.1| GRX1 [Nicotiana benthamiana]
          Length = 298

 Score =  375 bits (964), Expect = e-102
 Identities = 186/256 (72%), Positives = 221/256 (86%), Gaps = 2/256 (0%)
 Frame = -1

Query: 1002 FPSLSLKLTNSKRLSSLTLV-SAVKKISETDNVKVPLESNEISGYFPADSGVYAVFDQNN 826
            FPS++L+  +  R   +++V +AVKK+SETD + VPL+  EISG FP +SGVYAV+D N 
Sbjct: 42   FPSIALRPKSRTRNRHVSIVVAAVKKLSETDPLTVPLKPLEISGSFPKESGVYAVYDSNG 101

Query: 825  DLQFIGVSRNIAVSVLSHRKSVSDLCSAVKVGVVDEPDRTTLTEAWKSWMEEHIAATGKV 646
             LQF+G+SRNIA SV+SH+ +V  LCS+VKVGVVDEP+R  LTE+WKSWMEEHIAATGKV
Sbjct: 102  VLQFVGISRNIAASVVSHKNTVPQLCSSVKVGVVDEPNRIALTESWKSWMEEHIAATGKV 161

Query: 645  PPGNESGNGIWVKRV-QKKSDLRLTPGRNVQLTVPLEELIDRLVKENKVVAFIKGSRSAP 469
            PPGNE GN  WV++  +KK+DLRLTPGR+VQLTVPLE+LIDRLVKENKVVAFIKGSRSAP
Sbjct: 162  PPGNEPGNSTWVRQPPKKKTDLRLTPGRHVQLTVPLEDLIDRLVKENKVVAFIKGSRSAP 221

Query: 468  LCGFSQRVVGILESQGADYESVDVLDEEHNSGLRDTLKSYSNWPTFPQVFVNGELVGGCD 289
             CGFSQRVV +LES+G DYESVDVLDEE+N GLR+TLK+YSNWPTFPQ+FV GELVGGCD
Sbjct: 222  QCGFSQRVVAMLESEGVDYESVDVLDEEYNYGLRETLKNYSNWPTFPQIFVKGELVGGCD 281

Query: 288  ILVSMHEKGELSTLLK 241
            IL SM+EKGEL+TL K
Sbjct: 282  ILTSMYEKGELATLFK 297


>ref|XP_003604721.1| Monothiol glutaredoxin-S16 [Medicago truncatula]
            gi|355505776|gb|AES86918.1| Monothiol glutaredoxin-S16
            [Medicago truncatula]
          Length = 297

 Score =  362 bits (930), Expect = 7e-98
 Identities = 185/292 (63%), Positives = 233/292 (79%), Gaps = 5/292 (1%)
 Frame = -1

Query: 1098 MASTATLNLLTSPTSIFPKITPRLSFSSHLKTFPSL---SLKLTNSKRLSSLTLVSAVKK 928
            ++ST  L+    P S  P+ TP LS + H  +  +L   SLK  + ++  S  +  AVK 
Sbjct: 7    LSSTQLLSYHHFP-SFSPQNTPTLSLNFHPNSSTNLRPISLKPYHPRKPQSWLVAMAVKN 65

Query: 927  ISETDNVKVPLESNEISGY-FPADSGVYAVFDQNNDLQFIGVSRNIAVSVLSHRKSVSDL 751
            +++T  V V  E++ ++G   P+ +GVYAV+D+N +LQFIG+SRNIA +VL+HRKSV +L
Sbjct: 66   LADTSPVTVSPENDGLTGEELPSGAGVYAVYDKNGELQFIGLSRNIAATVLAHRKSVPEL 125

Query: 750  CSAVKVGVVDEPDRTTLTEAWKSWMEEHIAATGKVPPGNESGNGIWVK-RVQKKSDLRLT 574
            C + KVGVVDEPDR +LT+AWKSWMEEHI  TGKVPPGNESGN  WV+ + +KK+DLRLT
Sbjct: 126  CGSFKVGVVDEPDRESLTQAWKSWMEEHIKITGKVPPGNESGNATWVRPQPKKKADLRLT 185

Query: 573  PGRNVQLTVPLEELIDRLVKENKVVAFIKGSRSAPLCGFSQRVVGILESQGADYESVDVL 394
            PGR+VQLTVPLEEL+D+LVKENKVVAFIKGSRSAPLCGFSQ+V+GILE +G DYESVDVL
Sbjct: 186  PGRHVQLTVPLEELVDKLVKENKVVAFIKGSRSAPLCGFSQKVIGILEKEGVDYESVDVL 245

Query: 393  DEEHNSGLRDTLKSYSNWPTFPQVFVNGELVGGCDILVSMHEKGELSTLLKK 238
            DE++N GLR+TLK YSNWPTFPQ+F+NGELVGGCDIL SM+EKGE++ L KK
Sbjct: 246  DEDYNYGLRETLKKYSNWPTFPQIFLNGELVGGCDILTSMNEKGEVAGLFKK 297


Top