BLASTX nr result
ID: Coptis25_contig00011584
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011584
(2114 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinu... 363 1e-97
ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cuc... 324 7e-86
ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221... 324 7e-86
ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259... 315 2e-83
ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea ma... 305 4e-80
>ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1,
putative [Ricinus communis]
Length = 544
Score = 363 bits (932), Expect = 1e-97
Identities = 226/534 (42%), Positives = 284/534 (53%), Gaps = 11/534 (2%)
Frame = -1
Query: 1997 DSIELVKQKVQAYVSRLVSDAETKRPRXXXXXXXXXXXXXXXXSDAKKLTENTQSGP--- 1827
D EL KQ+ Q SR+ +DA+ KRPR D L N+ P
Sbjct: 20 DVFELAKQRAQEIASRIANDADLKRPRLVSDSSP----------DPPSLYSNSIPAPPSY 69
Query: 1826 -YPYMTQASSNYASQGSSKKIDIPNGKVGVIIGRAGDTIKSLQLQSGARIQVDKDTEVDP 1650
Y +Q S + SQG+SK+I IP+GKVGV+IG+ G+TIK++QLQSGA+IQ+ KD + DP
Sbjct: 70 TVSYASQQSQYHGSQGTSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADP 129
Query: 1649 YSQIRGVQLFGTPEQISRAEQLIKDVIAESDAGGPGSSAARGFNSVPEGGEHFILKVPNN 1470
+S R V+L GT EQISRAE+LI DVIAE+DAGG SSA G N+ G E F ++VPN+
Sbjct: 130 HSLTRDVELMGTSEQISRAEELINDVIAETDAGGSASSAVHGLNTKQPGAEQFSIRVPND 189
Query: 1469 KVAMVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLVNE 1290
KV ++IGKGGETIK MQS+SGAR+Q+IPL LPPGD +TER V+I+G EQIE AK+LVN+
Sbjct: 190 KVGLLIGKGGETIKYMQSRSGARMQIIPLHLPPGDPTTERTVYINGLTEQIEAAKELVND 249
Query: 1289 VISENRVRNPPVGNNQMQQAYYPPANWVPPVQSSXXXXXXXXXXXXXXXXXXXXXXXXXX 1110
V++ R+ +P ++ Q Y NW P Q+
Sbjct: 250 VLNGKRIIDPTGSSSYGQPTYPATGNWAQPGQTPMQQPQYGYAQPGNQPTPPAYYGNYTQ 309
Query: 1109 XQTVGWDQSN-SVAGPPQQSTG-NYYGQQNQTGSAAPNVNLSYGQTQS-TSQNYEQGYSH 939
WDQSN + QQ G YYGQQ Q GSA +N SY QT S Y YS
Sbjct: 310 QP--AWDQSNPTTMSQTQQMAGYGYYGQQPQMGSAP--LNSSYNQTPPVASSGYGNSYSQ 365
Query: 938 QPQGSGQNISGQVPPYDQQNSYVTSGYGPPNVSSQLDGTIPTQPYATQPPAYQGYYGQSP 759
Q GQNIS Q P +QQ Y TS YG VSSQ DG I +Q P Y Q
Sbjct: 366 QTSNYGQNISSQTPTLEQQRPYATSNYGSAAVSSQSDGAISSQSTQAAPAYPPPAYNQQV 425
Query: 758 AIAPTPAYGPQSYAGPLPPHPXXXXXXXXXXXXXXQPPAHPPAPLQSQPPISQPVYGQAG 579
A P + YAG PP + A +QPVYGQ G
Sbjct: 426 A-DPQTYWTAAGYAGQPPPQ------------TGYDQTGYSQAGYGVSLSSNQPVYGQGG 472
Query: 578 YPPQPAPLQSNNFQGATAYGMTHPQMQAQPPPKT----YAAPLPYGAERNGDNS 429
YP QP+P +N QG G PQ++AQP + ++ L YGAE + NS
Sbjct: 473 YPLQPSPAAANYAQGTNPLGYGQPQLEAQPQSQPSNNGHSQSLAYGAEIHDGNS 526
>ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
Length = 516
Score = 324 bits (830), Expect = 7e-86
Identities = 217/500 (43%), Positives = 271/500 (54%), Gaps = 34/500 (6%)
Frame = -1
Query: 2006 ELPDSIELVKQKVQAYVSRLVSDAETKRPRXXXXXXXXXXXXXXXXSDAKKLT--ENTQS 1833
+L ++I+L KQK Q V++LVS+AE+KRPR + T TQ+
Sbjct: 18 KLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYEPPAPAPPPQNPPLSSSTFTVSSGTQA 77
Query: 1832 GPYPYMTQASSNYASQGSSKKIDIPNGKVGVIIGRAGDTIKSLQLQSGARIQVDKDTEVD 1653
GPY + Q +SKKI+IPN KVG+IIG+ G+TIK LQLQSGA+IQ+ +D E D
Sbjct: 78 GPY---------HGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEAD 128
Query: 1652 PYSQIRGVQLFGTPEQISRAEQLIKDVIAESDAGGPGSSAARGFNSVPEGGEHFILKVPN 1473
P S R V+L GT EQ+SRAEQLI +VIAE+D+GG S+ + NS G E F++K+PN
Sbjct: 129 PQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAINSSQPGVEQFVMKIPN 188
Query: 1472 NKVAMVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLVN 1293
NKVA+VIGKGGETIKS+QSKS AR+Q+IPL LPPGDTSTER+V+I+G +EQIE AK+L+N
Sbjct: 189 NKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQIESAKELIN 248
Query: 1292 EVISENRVRNPPVGNNQMQQAYYPPANW-----VPPVQSSXXXXXXXXXXXXXXXXXXXX 1128
EVIS R+ + + Q Y NW PP+Q
Sbjct: 249 EVISGKRLVSET--TSYAQPTYPSTNNWSQAGQQPPLQQQ--QPQYGYAAGTYPPPQGPP 304
Query: 1127 XXXXXXXQTVGWDQSN-SVAGPPQQSTG-NYYGQQNQTGSAAPNV-NLSYGQTQST-SQN 960
Q WDQSN S P QSTG NYYGQQ+Q GSA P + SYGQ S+ +
Sbjct: 305 YYSTYPAQVASWDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQYHDYSYGQPASSGTHG 364
Query: 959 YEQGYSHQPQGSGQNISGQVPP-YDQQNSYVTSGYGP---PNVSSQLDGTIPTQPY--AT 798
Y+Q YS Q GQ+PP YDQQN Y+ SG P P+ + +GT PT Y +T
Sbjct: 365 YDQSYSQQAPS-----YGQIPPSYDQQNMYLNSGSAPSALPSSNGTSEGTYPTAAYQAST 419
Query: 797 QPPAYQ-----------------GYYGQSPAIAPTPAYGPQSYAGPLPPHPXXXXXXXXX 669
YQ Y S A P YG Y PP P
Sbjct: 420 GYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGHAQPPVYGQSVY----PPPP-------GV 468
Query: 668 XXXXXQPPAHPPAPLQSQPP 609
PP AP QSQPP
Sbjct: 469 YSAPAPPPPEMVAPTQSQPP 488
>ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
Length = 516
Score = 324 bits (830), Expect = 7e-86
Identities = 217/500 (43%), Positives = 271/500 (54%), Gaps = 34/500 (6%)
Frame = -1
Query: 2006 ELPDSIELVKQKVQAYVSRLVSDAETKRPRXXXXXXXXXXXXXXXXSDAKKLT--ENTQS 1833
+L ++I+L KQK Q V++LVS+AE+KRPR + T TQ+
Sbjct: 18 KLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYEPPAPAPPPQNPPLSSSTFTVSSGTQA 77
Query: 1832 GPYPYMTQASSNYASQGSSKKIDIPNGKVGVIIGRAGDTIKSLQLQSGARIQVDKDTEVD 1653
GPY + Q +SKKI+IPN KVG+IIG+ G+TIK LQLQSGA+IQ+ +D E D
Sbjct: 78 GPY---------HGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEAD 128
Query: 1652 PYSQIRGVQLFGTPEQISRAEQLIKDVIAESDAGGPGSSAARGFNSVPEGGEHFILKVPN 1473
P S R V+L GT EQ+SRAEQLI +VIAE+D+GG S+ + NS G E F++K+PN
Sbjct: 129 PQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAINSSQPGVEQFVMKIPN 188
Query: 1472 NKVAMVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLVN 1293
NKVA+VIGKGGETIKS+QSKS AR+Q+IPL LPPGDTSTER+V+I+G +EQIE AK+L+N
Sbjct: 189 NKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQIESAKELIN 248
Query: 1292 EVISENRVRNPPVGNNQMQQAYYPPANW-----VPPVQSSXXXXXXXXXXXXXXXXXXXX 1128
EVIS R+ + + Q Y NW PP+Q
Sbjct: 249 EVISGKRLVSET--TSYAQPTYPSTNNWSQAGQQPPLQQQ--QPQYGYAAGTYPPPQGPP 304
Query: 1127 XXXXXXXQTVGWDQSN-SVAGPPQQSTG-NYYGQQNQTGSAAPNV-NLSYGQTQST-SQN 960
Q WDQSN S P QSTG NYYGQQ+Q GSA P + SYGQ S+ +
Sbjct: 305 YYSTYPAQVASWDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQFHDYSYGQPASSGTHG 364
Query: 959 YEQGYSHQPQGSGQNISGQVPP-YDQQNSYVTSGYGP---PNVSSQLDGTIPTQPY--AT 798
Y+Q YS Q GQ+PP YDQQN Y+ SG P P+ + +GT PT Y +T
Sbjct: 365 YDQSYSQQAPS-----YGQIPPSYDQQNMYLNSGSAPSALPSSNGTSEGTYPTAAYQAST 419
Query: 797 QPPAYQ-----------------GYYGQSPAIAPTPAYGPQSYAGPLPPHPXXXXXXXXX 669
YQ Y S A P YG Y PP P
Sbjct: 420 GYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGHAQPPVYGQSVY----PPPP-------GV 468
Query: 668 XXXXXQPPAHPPAPLQSQPP 609
PP AP QSQPP
Sbjct: 469 YSAPAPPPPEMVAPTQSQPP 488
>ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 315 bits (808), Expect = 2e-83
Identities = 239/623 (38%), Positives = 297/623 (47%), Gaps = 76/623 (12%)
Frame = -1
Query: 1997 DSIELVKQKVQAYVSRLVSDA---ETKRPRXXXXXXXXXXXXXXXXSDAKKLTENTQSGP 1827
D I+L KQ+ Q +RL S+A E KRPR D + + G
Sbjct: 62 DEIQLAKQRAQEIAARLFSNASNTEAKRPRVENGAGAGGFDSG----DKGFSSAPSDVGQ 117
Query: 1826 YPYMTQASS---NYASQGSSKKIDIPNGKVGVIIGRAGDTIKSLQLQSGARIQVDKDTEV 1656
P ++ S+ +Y QG+SKKIDIPNG+VGVIIG+ G+TIK LQLQSGA+IQV +D +
Sbjct: 118 KPMISTPSAIPVSYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDA 177
Query: 1655 DPYSQIRGVQLFGTPEQISRAEQLIKDVIAESDAGGPGSSAARGFNSVPEGGEHFILKVP 1476
DP S R V+L GTP+QI++AEQLI DV++E++AGG G + R G E F++KVP
Sbjct: 178 DPNSPTRLVELMGTPDQIAKAEQLINDVLSEAEAGGSGIVSRRLTGQA--GSEQFVMKVP 235
Query: 1475 NNKVAMVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLV 1296
NNKV ++IGKGGETIK+MQ+++GARIQVIPL LPPGDTS ER V IDGT EQIE AKQLV
Sbjct: 236 NNKVGLIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQLV 295
Query: 1295 NEVISENRVRNPPVGNNQMQQAYY--PPANW-----VPPVQS---SXXXXXXXXXXXXXX 1146
NEVISENR+RNP + QQ Y PP+ W PP+Q S
Sbjct: 296 NEVISENRIRNPAMAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGPSPQY 355
Query: 1145 XXXXXXXXXXXXXQTVGWDQSNSVAGPPQQSTG-----NYYGQQN-------QTGSAAPN 1002
GWDQ+ A PP Q T +YYGQQ G + P
Sbjct: 356 NMSQPAYAGYSQPNATGWDQT---AAPPSQQTTPGSGYDYYGQQQTQQQQQAHGGPSGPA 412
Query: 1001 VNLSYGQTQSTSQNYE---QGYSHQPQGSGQNIS------GQ---VPPYDQQNSY-VTSG 861
N Y Q + Y QGY G G + GQ +P YDQQ Y +G
Sbjct: 413 DNSGYNYNQPPASGYNQQGQGYPQDGYGGGYHAPAPQPGYGQPQPIPGYDQQQGYNSATG 472
Query: 860 YGPPNVSSQLDGTIPTQPYATQPPAYQGYYGQSPAIAPTPAYGPQSYAGPLP-PHPXXXX 684
YG NV++ PTQ T QG GQ+P A G Q Y P P P
Sbjct: 473 YG--NVAN------PTQEGHTTSYGAQGETGQAPPSVQPSAIGQQGYNTQQPSPSPASYP 524
Query: 683 XXXXXXXXXXQPP-------AHPPA----------PLQSQPPISQPVYGQAGYPP----- 570
PP + PPA P + P + PVYGQ P
Sbjct: 525 PQGSNQPAYGMPPTSQTGFGSQPPAQSGYTTNYGPPQAQKAPANPPVYGQTQQSPSAQGG 584
Query: 569 --QPAPLQSNNFQGATAYGMTHPQMQAQPPPKT----------YAAPLPYGAERNGDNSI 426
QPAP+Q G H Q QPP ++ AAP YG G
Sbjct: 585 YAQPAPVQP---------GYPHSQ---QPPAQSGYAQTDSSSQRAAPSSYGTAA-GQPGY 631
Query: 425 APANNVTGSTVQEVAHAQS*KYS 357
+ + TV + + Q YS
Sbjct: 632 GGPSAYSAPTVTQAGYGQQPPYS 654
>ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein
ZEAMMB73_610626 [Zea mays] gi|413936737|gb|AFW71288.1|
hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 305 bits (780), Expect = 4e-80
Identities = 238/628 (37%), Positives = 298/628 (47%), Gaps = 80/628 (12%)
Frame = -1
Query: 2000 PDSIELVKQKVQAYVSRLVSDAETKRPRXXXXXXXXXXXXXXXXSDAKK----------- 1854
PD I+L KQ+ Q +R+ + AE KRPR
Sbjct: 48 PDEIQLAKQRAQEIAARIFNAAEAKRPRVDNGDDDVGGFGGGSSLGGSGGGGGGRIGGAG 107
Query: 1853 LTENTQSGPY------PYMTQASSNYAS----QGSSKKIDIPNGKVGVIIGRAGDTIKSL 1704
L ++ +G P +Q+S+ S QG+SKKI+IPNG+VGVIIG+AG+TI+ +
Sbjct: 108 LGFSSSAGGGHGASIPPLSSQSSAPQYSYGGHQGTSKKIEIPNGRVGVIIGKAGETIRYI 167
Query: 1703 QLQSGARIQVDKDTEVDPYSQIRGVQLFGTPEQISRAEQLIKDVIAESDAGGPGS-SAAR 1527
QLQSGA+IQV +D E +P + R V+L G PEQIS+AEQLIK+VIAE+DAG G+ S R
Sbjct: 168 QLQSGAKIQVTRDHEAEPGALTRQVELSGNPEQISKAEQLIKEVIAEADAGSSGAVSGGR 227
Query: 1526 GFNSVPEGGEHFILKVPNNKVAMVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERN 1347
+N+ G E F +K+ NNKV ++IGKGGETIKSMQ+KSGARIQVIPL LP GDTSTER
Sbjct: 228 KYNAPQPGAETFQMKIANNKVGLIIGKGGETIKSMQAKSGARIQVIPLHLPAGDTSTERT 287
Query: 1346 VHIDGTQEQIEFAKQLVNEVISENRVRNPPVGNNQMQQAYYPP---ANW----VPPVQSS 1188
VHIDGTQEQIE AKQLV EV SENR RNP G QQ Y+PP +NW PP QS
Sbjct: 288 VHIDGTQEQIEHAKQLVAEVTSENRARNPMSG-GYSQQGYHPPRPQSNWGPPSAPPQQSG 346
Query: 1187 XXXXXXXXXXXXXXXXXXXXXXXXXXXQT-----VGWDQS-NSVAGPPQQSTG-NYYGQQ 1029
T GWDQS N + TG +YY QQ
Sbjct: 347 YGYMQPGAYPGAPPQYGAPQQPYGSYPPTSGGYQTGWDQSQNQQSHTTPPGTGYDYYSQQ 406
Query: 1028 NQ---------TGSAAPNVNLSYGQTQS-TSQNYEQGYSHQPQG---------SGQNISG 906
Q T ++ + +YGQ + SQ Y+ Y+ G SG G
Sbjct: 407 QQPQQQQSAPGTAASTDATSYNYGQPSTYASQGYDSTYTQHSGGQQAYGHDGYSGYQTQG 466
Query: 905 QVPPYDQQNSYVTSGYGPPNVSSQLDGTIPTQPYA-------------TQPPA---YQGY 774
Q Y QQ Y GYG S + T Y T PA + GY
Sbjct: 467 QQQGYSQQTGYDQQGYGASAYGSAANSTQDGSSYGGPGGATQASPGQQTSTPAAGSHPGY 526
Query: 773 YGQSPAIA----PTPAYGPQSYAGPLPPHPXXXXXXXXXXXXXXQPPAH-PPAPLQSQPP 609
Q P A P P Y P PP P P A+ P+P +PP
Sbjct: 527 ASQPPTSAAASYPVQGSAPSGYGAP-PPQP--GYGTQPPQQGGYGPGAYGQPSPHGEKPP 583
Query: 608 ISQPVYGQAGYPPQPAPLQSNNFQGATAYGMTHPQMQAQP--PPKTYAAPLPYGAERNGD 435
S P YGQA P P Q G YG + P A P P A+ YG +++
Sbjct: 584 ASSP-YGQA---PPPGSAQG----GYVQYGYSQPAYGAPPAYPGAPTASHPGYGQQQSYG 635
Query: 434 NSIAPAN--NVTGSTVQEVAHAQS*KYS 357
++ + T T + A A S +S
Sbjct: 636 DAYGSGSYGQPTAYTTEAAAPAASQDHS 663