BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011573
         (1712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [V...   182   2e-50
ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [V...   184   2e-46
dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]    169   4e-46
ref|XP_003578624.1| PREDICTED: cysteinyl-tRNA synthetase-like [B...   171   2e-45
tpg|DAA52325.1| TPA: chloroplast protein synthesis1 [Zea mays]        171   2e-44

>ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
           gi|296087508|emb|CBI34097.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  182 bits (461), Expect(3) = 2e-50
 Identities = 107/229 (46%), Positives = 131/229 (57%), Gaps = 17/229 (7%)
 Frame = +2

Query: 251 GRNLEGNLAGQ*IEVDAR--NPADFALWKA-KTDEPH*DSPWGPGRPGWHIECNAMSAHY 421
           GR LE N AG+ + VD+R  NPADFALWKA K DEP  DSPWGPGRPGWHIEC+AMSAHY
Sbjct: 161 GRKLEDNRAGERVAVDSRKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHY 220

Query: 422 LIYSFDIHVGGDDLIFPHHENEYAQSSAACPDCNIKYWMHNGFEQ*ENVQIDKKFGH--N 595
           L + FDIH GG DLIFPHHENE AQS AAC + N+ YWMHNG     N ++ K  G+   
Sbjct: 221 LTFKFDIHGGGIDLIFPHHENEIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFT 280

Query: 596 SRQHQRLPSVGIEIFLGEHALSISY*LLDIAA*NRFSHCLLHL-----SDFVRF*TYLHL 760
            RQ   L           H L++ Y LL     +  ++ +  L     + F  + T    
Sbjct: 281 IRQITDL----------YHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDC 330

Query: 761 EKKMPSANEIASEE-------QKCIDNLCTDFKTKMSDDLHTQDFLNGA 886
           E  +    E+  +        + CI  L TDF+TKMSDDL T   LN +
Sbjct: 331 EDTLSPFQEVNGQNVCITPAAKDCISKLQTDFQTKMSDDLSTPHILNAS 379



 Score = 34.7 bits (78), Expect(3) = 2e-50
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +3

Query: 129 QIFRNGCAYELDGDVYFSID 188
           QI  N CAY +DGDVYF++D
Sbjct: 132 QIINNDCAYIIDGDVYFAVD 151



 Score = 32.0 bits (71), Expect(3) = 2e-50
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +1

Query: 4   ASTLKEEPLKFSARFC*GFLNDLTDL 81
           A+ L E PL  S+RFC  +L+D+TDL
Sbjct: 83  ANELGENPLTLSSRFCQEYLDDMTDL 108



 Score = 50.4 bits (119), Expect(2) = 1e-09
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +1

Query: 1105 KDYAKGDRIRLDLYVKGIALGDLGNHTTWRPCVP 1206
            K++++GD+IR DL  KGIAL D+G  T WRPCVP
Sbjct: 468  KNFSRGDQIRADLASKGIALMDVGKETIWRPCVP 501



 Score = 40.0 bits (92), Expect(2) = 1e-09
 Identities = 20/32 (62%), Positives = 24/32 (75%)
 Frame = +3

Query: 1014 VLQQLKEKALKRAGLTEEDVACFIEERVRAER 1109
            VLQQLK KAL+RAG+ E+DV   IEER  A +
Sbjct: 435  VLQQLKGKALRRAGMIEDDVLHLIEERALARK 466


>ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
           gi|297735988|emb|CBI23962.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  184 bits (466), Expect(2) = 2e-46
 Identities = 126/284 (44%), Positives = 155/284 (54%), Gaps = 17/284 (5%)
 Frame = +2

Query: 86  CLPPTHQLRVSESKADIQEWM-------CL*T*WRCILFH**L*SAKKRK*FRHI*PLTW 244
           CL PTHQ RVS+    I++ +       C  T    + F     +  K   +  +     
Sbjct: 110 CLSPTHQPRVSDHMDQIKDMITQIINNDCAYTIDGDVYF-----AVDKSPNYGRL----- 159

Query: 245 NFGRNLEGNLAGQ*IEVDAR--NPADFALWKA-KTDEPH*DSPWGPGRPGWHIECNAMSA 415
             GR LE N AG+ + VD+R  NPADFALWKA K  EP  DSPWGPGRPGWHIEC+AMSA
Sbjct: 160 -SGRKLENNRAGERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSA 218

Query: 416 HYLIYSFDIHVGGDDLIFPHHENEYAQSSAACPDCNIKYWMHNGFEQ*ENVQIDKKFGH- 592
           HYL + FDIH GG DLIFPHHENE AQS AAC + N+ YWMHNG     N ++ K  G+ 
Sbjct: 219 HYLTFKFDIHGGGIDLIFPHHENEIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNF 278

Query: 593 -NSRQHQRL--PSVGIEIFLGEHALS-ISY*LLDIAA*NRFSHCLLHLSDFVR-F*TYLH 757
              RQ   L  P       LG H  S ++Y    IA     S  + ++   +R     L 
Sbjct: 279 FTIRQITDLYHPLALRYFLLGTHYRSPVNY---SIAQLEIASEAVFYIYQTLRDCEDTLS 335

Query: 758 LEKKMPSANE-IASEEQKCIDNLCTDFKTKMSDDLHTQDFLNGA 886
           L +++   N  IA   Q CI  L TDF+TKMSDDL T   LN +
Sbjct: 336 LFQEVNGRNVCIAPAAQDCIRTLQTDFQTKMSDDLSTPHILNAS 379



 Score = 30.0 bits (66), Expect(2) = 2e-46
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +1

Query: 4   ASTLKEEPLKFSARFC*GFLNDLTDL 81
           A+ L E PL  S+ FC  +L+D+TDL
Sbjct: 83  ANELGENPLTLSSHFCQEYLDDMTDL 108



 Score = 53.5 bits (127), Expect(2) = 7e-11
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 1105 KDYAKGDRIRLDLYVKGIALGDLGNHTTWRPCVP 1206
            KD++KGD+IR DL  KGIAL D+G  T WRPCVP
Sbjct: 468  KDFSKGDQIRADLASKGIALMDVGKETIWRPCVP 501



 Score = 41.2 bits (95), Expect(2) = 7e-11
 Identities = 21/32 (65%), Positives = 24/32 (75%)
 Frame = +3

Query: 1014 VLQQLKEKALKRAGLTEEDVACFIEERVRAER 1109
            VLQQLK KALKRAG+ E+DV   IEER  A +
Sbjct: 435  VLQQLKGKALKRAGMIEDDVLHLIEERALARK 466


>dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 573

 Score =  169 bits (429), Expect(2) = 4e-46
 Identities = 101/213 (47%), Positives = 126/213 (59%), Gaps = 8/213 (3%)
 Frame = +2

Query: 251 GRNLEGNLAGQ*IEVDAR--NPADFALWKAKTD-EPH*DSPWGPGRPGWHIECNAMSAHY 421
           GR L+ N AG+ + VD R  NPADFALWKA  D EP  DSPWGPGRPGWHIEC+AMSA Y
Sbjct: 229 GRKLDDNRAGERVAVDERKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQY 288

Query: 422 LIYSFDIHVGGDDLIFPHHENEYAQSSAACPDCNIKYWMHNGFEQ*ENVQIDKKFGH--- 592
           L  SFDIH GG+DLIFPHHENE AQS AAC D +I YW+HNGF      ++ K  G+   
Sbjct: 289 LGNSFDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWVHNGFVNVNGQKMSKSLGNFIT 348

Query: 593 NSRQHQRLPSVGIEIF-LGEHALS-ISY*LLDIAA*NRFSHCLLHLSDFVRF*TYLHLEK 766
             +  +    + + +F LG H  S I+Y    +   N  S  L +    +R       + 
Sbjct: 349 IRKVIELYHPLALRMFLLGTHYRSPINY---TVEQLNVASDRLYYTYQTLRDSEESTQQD 405

Query: 767 KMPSANEIASEEQKCIDNLCTDFKTKMSDDLHT 865
           +  S + +      CI+ L  DF+T MSDDLHT
Sbjct: 406 QSSSGDSLPFTTTHCIEKLHEDFETSMSDDLHT 438



 Score = 43.5 bits (101), Expect(2) = 4e-46
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +3

Query: 99  HINCEFLKAKQIFRNGCAYELDGDVYFSIDDFNQQRR 209
           HI+      KQI  NGCAY + GDVYFS+D+F + R+
Sbjct: 190 HIDQIVTMIKQIIDNGCAYVVSGDVYFSVDNFPEYRK 226


>ref|XP_003578624.1| PREDICTED: cysteinyl-tRNA synthetase-like [Brachypodium distachyon]
          Length = 567

 Score =  171 bits (432), Expect(2) = 2e-45
 Identities = 101/213 (47%), Positives = 130/213 (61%), Gaps = 8/213 (3%)
 Frame = +2

Query: 251 GRNLEGNLAGQ*IEVDAR--NPADFALWKAKTD-EPH*DSPWGPGRPGWHIECNAMSAHY 421
           GR L+ N AG+ I VD R  NPADFALWKA  D EP  DSPWGPGRPGWHIEC+AMSA Y
Sbjct: 224 GRKLDDNRAGERIAVDERKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQY 283

Query: 422 LIYSFDIHVGGDDLIFPHHENEYAQSSAACPDCNIKYWMHNGFEQ*ENVQIDKKFGH--- 592
           L  SFDIH GG+DLIFPHHENE AQS AAC D +I YW+HNGF    + ++ K  G+   
Sbjct: 284 LGNSFDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVT 343

Query: 593 NSRQHQRLPSVGIEIF-LGEHALS-ISY*LLDIAA*NRFSHCLLHLSDFVRF*TYLHLEK 766
             +  ++   + + +F LG H  S I+Y    +   N  S  L +    +R       + 
Sbjct: 344 IRKVIEQYHPLALRMFLLGTHYRSPINY---TVEQLNVASDRLYYTYQTLRDSEESTQKD 400

Query: 767 KMPSANEIASEEQKCIDNLCTDFKTKMSDDLHT 865
           ++ S + + +    CI+ L  +F+T MSDDLHT
Sbjct: 401 QINSEDALPATTTHCIEKLQNEFETSMSDDLHT 433



 Score = 40.4 bits (93), Expect(2) = 2e-45
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +3

Query: 99  HINCEFLKAKQIFRNGCAYELDGDVYFSIDDF 194
           HI+      KQI  NGCAY + GDVYFS+D+F
Sbjct: 185 HIDQIVNMIKQILDNGCAYVVSGDVYFSVDNF 216


>tpg|DAA52325.1| TPA: chloroplast protein synthesis1 [Zea mays]
          Length = 564

 Score =  171 bits (433), Expect(2) = 2e-44
 Identities = 101/213 (47%), Positives = 128/213 (60%), Gaps = 8/213 (3%)
 Frame = +2

Query: 251 GRNLEGNLAGQ*IEVDAR--NPADFALWKAKTD-EPH*DSPWGPGRPGWHIECNAMSAHY 421
           GR L+ N AG+ + VD R  NPADFALWKA  D EP  DSPWGPGRPGWHIEC+AMSAHY
Sbjct: 221 GRKLDDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHY 280

Query: 422 LIYSFDIHVGGDDLIFPHHENEYAQSSAACPDCNIKYWMHNGFEQ*ENVQIDKKFGH--- 592
           L +SFDIH GG+DLIFPHHENE AQS AAC D  I YW+HNGF    + ++ K  G+   
Sbjct: 281 LGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVT 340

Query: 593 NSRQHQRLPSVGIEIF-LGEHALS-ISY*LLDIAA*NRFSHCLLHLSDFVRF*TYLHLEK 766
             +  +    + + +F LG H  S I+Y    I   N  S  L +    +R    +   +
Sbjct: 341 IRKVIEMYHPLALRMFLLGTHYRSPINY---TIEQLNVASDRLYYTYQTLRDCEEICQHQ 397

Query: 767 KMPSANEIASEEQKCIDNLCTDFKTKMSDDLHT 865
           +  + N + +     I  L  +F+T MSDDLHT
Sbjct: 398 QSNTGNPLPANTLNYIQKLHDEFETSMSDDLHT 430



 Score = 36.6 bits (83), Expect(2) = 2e-44
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +3

Query: 126 KQIFRNGCAYELDGDVYFSIDDF 194
           KQI  N CAY + GDVYFS+D+F
Sbjct: 191 KQILDNRCAYVVGGDVYFSVDNF 213