BLASTX nr result
ID: Coptis25_contig00011572
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011572
(2218 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [V... 680 0.0
ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [V... 675 0.0
ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucum... 663 0.0
ref|XP_002315932.1| predicted protein [Populus trichocarpa] gi|2... 662 0.0
ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus... 655 0.0
>ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product
[Vitis vinifera]
Length = 513
Score = 680 bits (1754), Expect = 0.0
Identities = 349/520 (67%), Positives = 396/520 (76%), Gaps = 2/520 (0%)
Frame = -2
Query: 2115 MADQKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYL 1936
MA+ EL +YNT+T++KE F P +GKV MYVCGVTAYD SH+GHARA V FD+LYRYL
Sbjct: 1 MAETTEL-RVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYL 59
Query: 1935 QYLGYEVTYVRNFTDVDDKIILRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRV 1756
Q+LGYEVTYVRNFTDVDDKII RANE GE+PL LS RFCQE+L+DM DLQCL PT QPRV
Sbjct: 60 QHLGYEVTYVRNFTDVDDKIIRRANELGENPLTLSSRFCQEYLDDMTDLQCLTPTQQPRV 119
Query: 1755 SDHMNEITDMIKQICDNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDG 1576
SDHM++I DMI QI +ND AY DGDVYF++D K+ N Y RLSGRK EDNR G
Sbjct: 120 SDHMDQIKDMITQIINNDCAYII-DGDVYFAVD----KSPN----YGRLSGRKLEDNRAG 170
Query: 1575 ERVEVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGG 1396
ERV V S+KRNP+DFALWKAAKP EPSWDSPWG GRPGWHIECSAMSA YLT FDIHGG
Sbjct: 171 ERVAVDSRKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGG 230
Query: 1395 GMDLIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHP 1216
G+DLIFPHHENE QSCAAC + N+ YWMHNG VT +EKMSKS GNFFTIR IT YHP
Sbjct: 231 GIDLIFPHHENEIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHP 290
Query: 1215 LALRYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEEALSAFRERNVEGPNGKVE 1036
LALRYFL+ THYRSPVN+S QLEIAS++VFYIYQTL D E+ LS F+E NG+
Sbjct: 291 LALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQE-----VNGQNV 345
Query: 1035 RITSEAQNSIDKLHTDFKTKMLDDLHTQDILNAAFLEALRLMN--XXXXXXXXXXXXXXX 862
IT A++ I KL TDF+TKM DDL T ILNA+ EALR +N
Sbjct: 346 CITPAAKDCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLS 405
Query: 861 LYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRAGLTEDNVLSLIEERVQAR 682
SL LEKEVK V++ LGLL YSEVLQQLK KAL RAG+ ED+VL LIEER AR
Sbjct: 406 AVQSLTELEKEVKGVLSVLGLLSTLAYSEVLQQLKGKALRRAGMIEDDVLHLIEERALAR 465
Query: 681 KNREYAKSDQIRLDLTAKGIALMDLGKDTIWRPCVPVEPE 562
KN+ +++ DQIR DL +KGIALMD+GK+TIWRPCVPVE E
Sbjct: 466 KNKNFSRGDQIRADLASKGIALMDVGKETIWRPCVPVEQE 505
>ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product
[Vitis vinifera]
Length = 513
Score = 675 bits (1742), Expect = 0.0
Identities = 347/527 (65%), Positives = 398/527 (75%), Gaps = 2/527 (0%)
Frame = -2
Query: 2115 MADQKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYL 1936
MA+ EL +YNT+T++KE P +GKV MYVCGVTAYD SH+GH RA V+FD+LYRYL
Sbjct: 1 MAEMTEL-RVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYL 59
Query: 1935 QYLGYEVTYVRNFTDVDDKIILRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRV 1756
Q+LGYEVTYVRNFTDVDDKII RANE GE+PL LS FCQE+L+DM DL CL PTHQPRV
Sbjct: 60 QHLGYEVTYVRNFTDVDDKIIRRANELGENPLTLSSHFCQEYLDDMTDLHCLSPTHQPRV 119
Query: 1755 SDHMNEITDMIKQICDNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDG 1576
SDHM++I DMI QI +ND AY T DGDVYF++D K+ N Y RLSGRK E+NR G
Sbjct: 120 SDHMDQIKDMITQIINNDCAY-TIDGDVYFAVD----KSPN----YGRLSGRKLENNRAG 170
Query: 1575 ERVEVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGG 1396
ERV V S+KRNP+DFALWKAAKPGEPSWDSPWG GRPGWHIECSAMSA YLT FDIHGG
Sbjct: 171 ERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGG 230
Query: 1395 GMDLIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHP 1216
G+DLIFPHHENE QSCAAC + N+ YWMHNG VT +EKMSKS GNFFTIR IT YHP
Sbjct: 231 GIDLIFPHHENEIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDLYHP 290
Query: 1215 LALRYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEEALSAFRERNVEGPNGKVE 1036
LALRYFL+ THYRSPVN+S QLEIAS++VFYIYQTL D E+ LS F+E NG+
Sbjct: 291 LALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQE-----VNGRNV 345
Query: 1035 RITSEAQNSIDKLHTDFKTKMLDDLHTQDILNAAFLEALRLMN--XXXXXXXXXXXXXXX 862
I AQ+ I L TDF+TKM DDL T ILNA+ EALR +N
Sbjct: 346 CIAPAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLS 405
Query: 861 LYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRAGLTEDNVLSLIEERVQAR 682
SL L KEVK V++ LGLL YSEVLQQLK KAL RAG+ ED+VL LIEER AR
Sbjct: 406 AVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALAR 465
Query: 681 KNREYAKSDQIRLDLTAKGIALMDLGKDTIWRPCVPVEPEQPGRPVS 541
KN++++K DQIR DL +KGIALMD+GK+TIWRPCVPV+ ++P P S
Sbjct: 466 KNKDFSKGDQIRADLASKGIALMDVGKETIWRPCVPVQ-QEPQAPAS 511
>ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED:
cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 663 bits (1710), Expect = 0.0
Identities = 331/556 (59%), Positives = 411/556 (73%), Gaps = 15/556 (2%)
Frame = -2
Query: 2103 KELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYLQYLG 1924
KE F +YN++T++KE F KE GKVGMYVCG+TAYD+SHIGHARA V FD+LYRYL++LG
Sbjct: 3 KEEFRVYNSMTQQKEVFTTKEPGKVGMYVCGITAYDFSHIGHARAAVNFDVLYRYLKHLG 62
Query: 1923 YEVTYVRNFTDVDDKIILRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRVSDHM 1744
YEVTYVRNFTDVDDKII RANE+GE+P LS RFCQE+L+DMADLQCL PTHQPRVSDH+
Sbjct: 63 YEVTYVRNFTDVDDKIIRRANESGENPFALSDRFCQEYLSDMADLQCLSPTHQPRVSDHL 122
Query: 1743 NEITDMIKQICDNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDGERVE 1564
+I DMI QI N Y Y DGDV+FS+D + + Y +LSG+K E++R GERV
Sbjct: 123 EQIKDMITQIIKNGYGYAV-DGDVFFSVDKFPN--------YGQLSGQKLENHRAGERVA 173
Query: 1563 VSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGGGMDL 1384
V S+K NP+DFALWKAAKPGEPSW+SPWG GRPGWHIECSAMSA YLT FDIHGGG+DL
Sbjct: 174 VDSRKNNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDL 233
Query: 1383 IFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHPLALR 1204
IFPHHENE QSCAAC + I YWMHNG VT +EKMSKS GNFFTIR IT++YHPL LR
Sbjct: 234 IFPHHENEVAQSCAACQESKISYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLVLR 293
Query: 1203 YFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEEALSAFRERNVE---GPNGKVER 1033
+FL+S HYRSP+N++ QL+ ASD+V+YIYQT+ D E+ALS + N+ G GK +
Sbjct: 294 HFLISAHYRSPLNYTVSQLDSASDTVYYIYQTMQDCEDALSQHQGENLSDGLGKTGKKDP 353
Query: 1032 ITSEAQNSIDKLHTDFKTKMLDDLHTQDILNAAFLEALRLMN--XXXXXXXXXXXXXXXL 859
++S A+ I L ++F+T+M DDL+T IL AF EAL+ +N +
Sbjct: 354 VSSAAEECIINLRSEFQTRMADDLNTAHILTGAFQEALKFINSTLTSLKKKQPKKQQLSM 413
Query: 858 YHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRAGLTEDNVLSLIEERVQARK 679
SL+ ++KE++ V++ LGLL +TYSEVLQQLK+KAL RAG+ ED++L LIEER QARK
Sbjct: 414 IQSLVNVKKELREVLDVLGLLSTSTYSEVLQQLKDKALKRAGMVEDDILHLIEERTQARK 473
Query: 678 NREYAKSDQIRLDLTAKGIALMDLGKDTIWRPCVPVEP--------EQPGRPVSKPNEQH 523
++ + KSD IR L++ GIALMD+G++TIWRPCVPVEP ++ + KP EQ
Sbjct: 474 DKNFGKSDNIRAKLSSLGIALMDVGRETIWRPCVPVEPAVLVPPGEQKATQAEQKPMEQQ 533
Query: 522 --QPVAPASAPVEQLQ 481
QP A V+ Q
Sbjct: 534 VAQPPAGEQQTVDNAQ 549
>ref|XP_002315932.1| predicted protein [Populus trichocarpa] gi|222864972|gb|EEF02103.1|
predicted protein [Populus trichocarpa]
Length = 532
Score = 662 bits (1707), Expect = 0.0
Identities = 332/544 (61%), Positives = 412/544 (75%), Gaps = 5/544 (0%)
Frame = -2
Query: 2115 MADQKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYL 1936
MA+ +EL +YN++T++KE F + GKV MYVCGVT+YD+SH+GHARA VAFDIL+RYL
Sbjct: 1 MANNEEL-KLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYL 59
Query: 1935 QYLGYEVTYVRNFTDVDDKIILRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRV 1756
Q+LGYEVTYVRNFTD+DDKII RANE GEDPL LS RFC+E+L DM DLQCL PTHQPRV
Sbjct: 60 QHLGYEVTYVRNFTDIDDKIIRRANEIGEDPLSLSSRFCEEYLVDMTDLQCLIPTHQPRV 119
Query: 1755 SDHMNEITDMIKQICDNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDG 1576
+DH+ +I DMI QI + D AY E GDV+F++ N Y +LSG++ E+NR G
Sbjct: 120 TDHVEQIKDMITQIIEKDCAYAVE-GDVFFAV--------NKSPNYGQLSGQRLENNRAG 170
Query: 1575 ERVEVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGG 1396
ERV V S+KRNP+DFALWKAAKPGEPSW+SPWG GRPGWHIECSAMSA+YLT FDIHGG
Sbjct: 171 ERVAVDSRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGG 230
Query: 1395 GMDLIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHP 1216
G+DLIFPHHENE QSCAAC + ++ YWMHNG VT +EKMSKS GNFFTIR IT++YHP
Sbjct: 231 GIDLIFPHHENEIAQSCAACEESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHP 290
Query: 1215 LALRYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEEALSAFRERNVE---GPNG 1045
LALR+FL+S HYRSP+N+S QLE +SD+VFYIYQTL D E+AL F+E +++ G N
Sbjct: 291 LALRHFLISAHYRSPLNYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKEGAGQNA 350
Query: 1044 KVERITSEAQNSIDKLHTDFKTKMLDDLHTQDILNAAFLEALRLMN--XXXXXXXXXXXX 871
+ IT++AQ I +LH DF+TKM DDL+T +L AF EAL+++N
Sbjct: 351 NLVAITADAQKCISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQKKQ 410
Query: 870 XXXLYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRAGLTEDNVLSLIEERV 691
L S+ ++KEV V+ LGL P T +EVLQQLK KAL RAGLTED+V+SLIE+R
Sbjct: 411 QLSLIRSVTEVKKEVTEVLRILGLFPPCTCAEVLQQLKGKALKRAGLTEDDVMSLIEDRA 470
Query: 690 QARKNREYAKSDQIRLDLTAKGIALMDLGKDTIWRPCVPVEPEQPGRPVSKPNEQHQPVA 511
ARK++++ KSDQIR DL+A+GIALMD+GK+T+WRPCVPVE E+ + V + +P
Sbjct: 471 VARKSQDFKKSDQIRTDLSARGIALMDVGKETVWRPCVPVENEEKAKTVVE-----EPTP 525
Query: 510 PASA 499
P A
Sbjct: 526 PPQA 529
>ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase,
putative [Ricinus communis]
Length = 530
Score = 655 bits (1689), Expect = 0.0
Identities = 322/535 (60%), Positives = 408/535 (76%), Gaps = 5/535 (0%)
Frame = -2
Query: 2106 QKELFHIYNTITKKKESFNPKEEGKVGMYVCGVTAYDYSHIGHARAYVAFDILYRYLQYL 1927
+K F +YNT+ ++ E+F P GKVGMYVCGVTAY +SHIGHARA V FD+L+RYLQ+L
Sbjct: 3 KKVEFKLYNTMNRQLEAFKPHVPGKVGMYVCGVTAYAFSHIGHARAAVIFDVLFRYLQHL 62
Query: 1926 GYEVTYVRNFTDVDDKIILRANETGEDPLKLSGRFCQEFLNDMADLQCLPPTHQPRVSDH 1747
GYEVTY RNFTD+DDKII RANE+GEDP LS RFC+E+L DM LQCL PTHQPRV+DH
Sbjct: 63 GYEVTYARNFTDIDDKIIKRANESGEDPFSLSSRFCEEYLVDMDSLQCLRPTHQPRVTDH 122
Query: 1746 MNEITDMIKQICDNDYAYKTEDGDVYFSIDNYQSKNNNTDRAYYRLSGRKAEDNRDGERV 1567
+ +I DMI QI +N +AY +E GDV+F++D + + Y +LSG+K E++R GER
Sbjct: 123 IEQIKDMITQIINNGFAYPSE-GDVFFAVDKFPN--------YGQLSGQKLENHRAGER- 172
Query: 1566 EVSSKKRNPSDFALWKAAKPGEPSWDSPWGLGRPGWHIECSAMSARYLTSSFDIHGGGMD 1387
++KRNP+DFALWKAAKPGEPSW+SPWG GRPGWHIECSAMSA+YLT FDIHGGG D
Sbjct: 173 NPDTRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGSD 232
Query: 1386 LIFPHHENEYVQSCAACSDCNIRYWMHNGFVTVKDEKMSKSTGNFFTIRDITQQYHPLAL 1207
LIFPHHENE QS AAC + N+ YW+HNG VT +EKMSKS GN+FTIR++T++YHPLA+
Sbjct: 233 LIFPHHENEITQSAAACQESNVSYWIHNGHVTNNNEKMSKSLGNYFTIREVTERYHPLAV 292
Query: 1206 RYFLMSTHYRSPVNFSTLQLEIASDSVFYIYQTLHDSEEALSAFRERNVE---GPNGKVE 1036
R+FL+S HYRSP+N++ QLE ASD++FYIYQTL D E+ALS F++ +++ N KV
Sbjct: 293 RHFLISAHYRSPLNYTVFQLESASDAIFYIYQTLQDCEDALSMFQDGSLKEGAAQNSKVV 352
Query: 1035 RITSEAQNSIDKLHTDFKTKMLDDLHTQDILNAAFLEALRLMN--XXXXXXXXXXXXXXX 862
IT++A+ I+KL +F+TKM DDL T IL AF +AL+ +N
Sbjct: 353 GITADAKKCINKLRDEFETKMSDDLSTSHILTGAFQDALKFINSSISMLKKKLQKPQQLS 412
Query: 861 LYHSLIALEKEVKAVMNTLGLLLPATYSEVLQQLKEKALNRAGLTEDNVLSLIEERVQAR 682
L SL +E+E+K V+N LGLL P TY+E+LQQLK+KAL RAG+TED+VL IEER QAR
Sbjct: 413 LIQSLTEIEREIKLVLNILGLLPPGTYAEILQQLKDKALKRAGVTEDDVLRSIEERAQAR 472
Query: 681 KNREYAKSDQIRLDLTAKGIALMDLGKDTIWRPCVPVEPEQPGRPVSKPNEQHQP 517
KN+E+++SDQ+R +L AKGIALMD+GK+T+WRPCVPVE EQ VS +Q+ P
Sbjct: 473 KNKEFSRSDQVRANLAAKGIALMDVGKETVWRPCVPVEQEQ--EAVSVVKDQNPP 525