BLASTX nr result

ID: Coptis25_contig00011568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011568
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157707.1| PREDICTED: LOW QUALITY PROTEIN: 7-hydroxymet...   116   2e-24
ref|XP_004134392.1| PREDICTED: 7-hydroxymethyl chlorophyll a red...   116   2e-24
ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [...   114   8e-24
emb|CAN75142.1| hypothetical protein VITISV_038426 [Vitis vinifera]   114   8e-24
ref|NP_171956.2| coenzyme F420 hydrogenase beta subunit [Arabido...   111   5e-23

>ref|XP_004157707.1| PREDICTED: LOW QUALITY PROTEIN: 7-hydroxymethyl chlorophyll a
           reductase, chloroplastic-like [Cucumis sativus]
          Length = 459

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = -1

Query: 216 LRAVEQHLNLEKLYVLGTNYVDNGTREGLE*FLKAASSESETVLHYEFMQDYKVHLKHLD 37
           LR+VEQHLNLEKLYVLGTN VDNGTREGL+ FLKAAS+E ETVLHYEFMQDYKVHLKHLD
Sbjct: 212 LRSVEQHLNLEKLYVLGTNCVDNGTREGLDKFLKAASTEPETVLHYEFMQDYKVHLKHLD 271

Query: 36  EHTEGV 19
            H E V
Sbjct: 272 GHIEEV 277


>ref|XP_004134392.1| PREDICTED: 7-hydroxymethyl chlorophyll a reductase,
           chloroplastic-like [Cucumis sativus]
          Length = 459

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/66 (86%), Positives = 60/66 (90%)
 Frame = -1

Query: 216 LRAVEQHLNLEKLYVLGTNYVDNGTREGLE*FLKAASSESETVLHYEFMQDYKVHLKHLD 37
           LR+VEQHLNLEKLYVLGTN VDNGTREGL+ FLKAAS+E ETVLHYEFMQDYKVHLKHLD
Sbjct: 212 LRSVEQHLNLEKLYVLGTNCVDNGTREGLDKFLKAASTEPETVLHYEFMQDYKVHLKHLD 271

Query: 36  EHTEGV 19
            H E V
Sbjct: 272 GHIEEV 277


>ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [Vitis vinifera]
           gi|297741879|emb|CBI33314.3| unnamed protein product
           [Vitis vinifera]
          Length = 457

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = -1

Query: 216 LRAVEQHLNLEKLYVLGTNYVDNGTREGLE*FLKAASSESETVLHYEFMQDYKVHLKHLD 37
           LR+VEQHLNL+KLYVLGTN VDNGTREGL+ FL AASSE ETVLHYEFMQDYKVHLKHLD
Sbjct: 211 LRSVEQHLNLDKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFMQDYKVHLKHLD 270

Query: 36  EHTEGV 19
            H E V
Sbjct: 271 GHIEEV 276


>emb|CAN75142.1| hypothetical protein VITISV_038426 [Vitis vinifera]
          Length = 366

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/66 (84%), Positives = 59/66 (89%)
 Frame = -1

Query: 216 LRAVEQHLNLEKLYVLGTNYVDNGTREGLE*FLKAASSESETVLHYEFMQDYKVHLKHLD 37
           LR+VEQHLNL+KLYVLGTN VDNGTREGL+ FL AASSE ETVLHYEFMQDYKVHLKHLD
Sbjct: 113 LRSVEQHLNLDKLYVLGTNCVDNGTREGLDKFLNAASSEPETVLHYEFMQDYKVHLKHLD 172

Query: 36  EHTEGV 19
            H E V
Sbjct: 173 GHIEEV 178


>ref|NP_171956.2| coenzyme F420 hydrogenase beta subunit [Arabidopsis thaliana]
           gi|75150253|sp|Q8GS60.1|HCAR_ARATH RecName:
           Full=7-hydroxymethyl chlorophyll a reductase,
           chloroplastic; Flags: Precursor
           gi|25083091|gb|AAN72040.1| unknown protein [Arabidopsis
           thaliana] gi|26451024|dbj|BAC42618.1| unknown protein
           [Arabidopsis thaliana] gi|30387563|gb|AAP31947.1|
           At1g04620 [Arabidopsis thaliana]
           gi|332189601|gb|AEE27722.1| coenzyme F420 hydrogenase
           beta subunit [Arabidopsis thaliana]
          Length = 462

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/66 (83%), Positives = 58/66 (87%)
 Frame = -1

Query: 216 LRAVEQHLNLEKLYVLGTNYVDNGTREGLE*FLKAASSESETVLHYEFMQDYKVHLKHLD 37
           LR+VEQHLNLEKLYVLGTN VDNGTR+GL+ FLKAAS E ETVLHYEFMQDYKV LKHLD
Sbjct: 216 LRSVEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPETVLHYEFMQDYKVQLKHLD 275

Query: 36  EHTEGV 19
            H E V
Sbjct: 276 GHIEEV 281


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