BLASTX nr result
ID: Coptis25_contig00011563
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011563
(598 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 175 1e-49
ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660... 173 6e-49
ref|XP_004171545.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 173 6e-49
ref|XP_003544997.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 174 7e-49
ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|2... 171 2e-48
>ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At1g76660-like [Glycine max]
Length = 475
Score = 175 bits (444), Expect(2) = 1e-49
Identities = 98/177 (55%), Positives = 116/177 (65%), Gaps = 10/177 (5%)
Frame = +2
Query: 2 ELNHLTTSSSPDMPFALTFSSAMDLKGTSRSSYVTANDLQVTYPLYPESPASSLTSPILG 181
EL HLTT SSPD+PFA SS++DLK + +Y+TANDLQ TY LYP SPASSL SPI
Sbjct: 146 ELAHLTTPSSPDVPFAHFLSSSVDLKNNGKGNYITANDLQATYSLYPGSPASSLISPISR 205
Query: 182 TSGDCLSSSFPEREFPAKW--AAXXXXXXXXXXXXXRLFGLDTGPSNNFMLSRDTTFFYP 355
SGDCLSSSFPEREF +W + R+ G DT S M S+DT FF P
Sbjct: 206 NSGDCLSSSFPEREFHPQWDSSLSPENGKYQRTGSGRVSGHDT--SGVTMASQDTNFFCP 263
Query: 356 AASPQFHLDQ--------ARTSVSREADVQSSSGNGHQNRHTKSSKPDVEEIEAYRS 502
A QF+LDQ R SVS+++DVQS+ GNGHQ+RH +S K DVEEIEAYR+
Sbjct: 264 ATYAQFYLDQNPPFPHNGGRLSVSKDSDVQSNGGNGHQSRHARSPKQDVEEIEAYRA 320
Score = 47.0 bits (110), Expect(2) = 1e-49
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +3
Query: 477 LRKLKLIEASFGFSADEIITTPHYIEMSDDILDVSFTMAP 596
+ +++ ASFGFSADEIITT Y+E+S D+++ SFTM P
Sbjct: 312 VEEIEAYRASFGFSADEIITTSQYVEIS-DVMEESFTMLP 350
>ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660-like [Cucumis sativus]
Length = 469
Score = 173 bits (439), Expect(2) = 6e-49
Identities = 95/176 (53%), Positives = 118/176 (67%), Gaps = 9/176 (5%)
Frame = +2
Query: 2 ELNHLTTSSSPDMPFALTFSSAMDLKGTSRSSYVTANDLQVTYPLYPESPASSLTSPILG 181
EL HLTT SSPD+PFA SS+ DLKGT +++Y+ +NDLQ Y LYP SPASSL SPI
Sbjct: 146 ELAHLTTPSSPDVPFAQFLSSSEDLKGTGKANYIASNDLQAAYSLYPGSPASSLVSPISR 205
Query: 182 TSGDCLSSSFPEREFPAKW--AAXXXXXXXXXXXXXRLFGLDTGPSNNFMLSRDTTFFYP 355
TSGDCLSSSFPER+F +W +A RLFG + ++ + S+D+ FF P
Sbjct: 206 TSGDCLSSSFPERDFRPQWNSSASLQDGKYPRSGSGRLFGNEKAGTS--LASQDSNFFCP 263
Query: 356 AASPQFHLDQ-------ARTSVSREADVQSSSGNGHQNRHTKSSKPDVEEIEAYRS 502
A QF+LD R SVS+++DV SS GNG+QNRH+KS K DVEEIEAYR+
Sbjct: 264 ATFAQFYLDNTTFPHTGGRLSVSKDSDVYSSCGNGYQNRHSKSPKQDVEEIEAYRA 319
Score = 46.6 bits (109), Expect(2) = 6e-49
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +3
Query: 477 LRKLKLIEASFGFSADEIITTPHYIEMSDDILDVSFTMAP 596
+ +++ ASFGFSADEIITT Y+E+S D+++ SFTM P
Sbjct: 311 VEEIEAYRASFGFSADEIITTTQYVEIS-DVMEDSFTMRP 349
>ref|XP_004171545.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At1g76660-like [Cucumis sativus]
Length = 421
Score = 173 bits (439), Expect(2) = 6e-49
Identities = 95/176 (53%), Positives = 118/176 (67%), Gaps = 9/176 (5%)
Frame = +2
Query: 2 ELNHLTTSSSPDMPFALTFSSAMDLKGTSRSSYVTANDLQVTYPLYPESPASSLTSPILG 181
EL HLTT SSPD+PFA SS+ DLKGT +++Y+ +NDLQ Y LYP SPASSL SPI
Sbjct: 146 ELAHLTTPSSPDVPFAQFLSSSEDLKGTGKANYIASNDLQAAYSLYPGSPASSLVSPISR 205
Query: 182 TSGDCLSSSFPEREFPAKW--AAXXXXXXXXXXXXXRLFGLDTGPSNNFMLSRDTTFFYP 355
TSGDCLSSSFPER+F +W +A RLFG + ++ + S+D+ FF P
Sbjct: 206 TSGDCLSSSFPERDFRPQWNSSASLQDGKYPRSGSGRLFGNEKAGTS--LASQDSNFFCP 263
Query: 356 AASPQFHLDQ-------ARTSVSREADVQSSSGNGHQNRHTKSSKPDVEEIEAYRS 502
A QF+LD R SVS+++DV SS GNG+QNRH+KS K DVEEIEAYR+
Sbjct: 264 ATFAQFYLDNTTFPHTGGRLSVSKDSDVYSSCGNGYQNRHSKSPKQDVEEIEAYRA 319
Score = 46.6 bits (109), Expect(2) = 6e-49
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +3
Query: 477 LRKLKLIEASFGFSADEIITTPHYIEMSDDILDVSFTMAP 596
+ +++ ASFGFSADEIITT Y+E+S D+++ SFTM P
Sbjct: 311 VEEIEAYRASFGFSADEIITTTQYVEIS-DVMEDSFTMRP 349
>ref|XP_003544997.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At1g76660-like [Glycine max]
Length = 475
Score = 174 bits (442), Expect(2) = 7e-49
Identities = 97/177 (54%), Positives = 117/177 (66%), Gaps = 10/177 (5%)
Frame = +2
Query: 2 ELNHLTTSSSPDMPFALTFSSAMDLKGTSRSSYVTANDLQVTYPLYPESPASSLTSPILG 181
EL HLTT SSPD+PFA SS++DLK + + +Y+TANDLQ TY LYP SPASSL SPI
Sbjct: 146 ELAHLTTPSSPDVPFAHFLSSSVDLKNSDKGNYITANDLQATYSLYPGSPASSLISPISR 205
Query: 182 TSGDCLSSSFPEREFPAKW--AAXXXXXXXXXXXXXRLFGLDTGPSNNFMLSRDTTFFYP 355
SGDCLSSSFPEREF +W + R+ G DT + M S+DT FF P
Sbjct: 206 NSGDCLSSSFPEREFRPQWDSSLSPENGKYQRTGSGRVSGHDT--NGVTMASQDTNFFCP 263
Query: 356 AASPQFHLDQ--------ARTSVSREADVQSSSGNGHQNRHTKSSKPDVEEIEAYRS 502
A QF+LDQ R SVS+++DVQS+ GNGHQ+RH +S K DVEEIEAYR+
Sbjct: 264 ATYAQFYLDQNPPFPHNGGRLSVSKDSDVQSNGGNGHQSRHARSPKQDVEEIEAYRA 320
Score = 45.1 bits (105), Expect(2) = 7e-49
Identities = 21/40 (52%), Positives = 31/40 (77%)
Frame = +3
Query: 477 LRKLKLIEASFGFSADEIITTPHYIEMSDDILDVSFTMAP 596
+ +++ ASFGFSADEII+T Y+E+S D+++ SFTM P
Sbjct: 312 VEEIEAYRASFGFSADEIISTSQYVEIS-DVMEDSFTMMP 350
>ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|222842334|gb|EEE79881.1|
predicted protein [Populus trichocarpa]
Length = 470
Score = 171 bits (432), Expect(2) = 2e-48
Identities = 92/174 (52%), Positives = 116/174 (66%), Gaps = 7/174 (4%)
Frame = +2
Query: 2 ELNHLTTSSSPDMPFALTFSSAMDLKGTSRSSYVTANDLQVTYPLYPESPASSLTSPILG 181
EL HLTT SSPD+PFA +S+ DLKG +++Y+ A+DLQ TY LYP SPASSL SPI
Sbjct: 140 ELAHLTTPSSPDVPFAQFLTSSRDLKGAEKNNYIVASDLQSTYSLYPGSPASSLLSPISR 199
Query: 182 TSGDCLSSSFPEREFPAKW--AAXXXXXXXXXXXXXRLFGLDTGPSNNFMLSRDTTFFYP 355
TSGDCLS+SFPER FP +W + RLFG +T ++ M+S D+ FF P
Sbjct: 200 TSGDCLSASFPERGFPREWGPSVSPQNGKYSRSGSGRLFGHETTGAS--MVSHDSNFFCP 257
Query: 356 AASPQFHLDQ-----ARTSVSREADVQSSSGNGHQNRHTKSSKPDVEEIEAYRS 502
A +F+LD R SVS+++DV +SGNGHQNRH KS K D EE+EAYR+
Sbjct: 258 ATFARFYLDHDPNTGGRLSVSKDSDVYPASGNGHQNRHNKSPKQDAEELEAYRA 311
Score = 47.8 bits (112), Expect(2) = 2e-48
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = +3
Query: 483 KLKLIEASFGFSADEIITTPHYIEMSDDILDVSFTMAP 596
+L+ ASFGFSADEIITTP Y+E+S D+++ +F+M P
Sbjct: 305 ELEAYRASFGFSADEIITTPQYVEIS-DVMEDTFSMTP 341