BLASTX nr result

ID: Coptis25_contig00011538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011538
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632656.1| PREDICTED: uncharacterized protein LOC100854...    71   8e-11
ref|XP_002532545.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_003632656.1| PREDICTED: uncharacterized protein LOC100854478 [Vitis vinifera]
          Length = 257

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/61 (55%), Positives = 46/61 (75%)
 Frame = +3

Query: 75  MTEFRPTVYFPVVFFDGECEIDIGNIGIYSTLDFNKLQSILSQKIGISPHQLTISLVFRK 254
           M E    V FPVVFFDGE EI+IG++ ++ +++F   QSILSQKIGISPHQ++I L  ++
Sbjct: 1   MMEINAGVSFPVVFFDGEREINIGDVVVFPSMEFKNFQSILSQKIGISPHQISIFLDCQR 60

Query: 255 K 257
           K
Sbjct: 61  K 61


>ref|XP_002532545.1| conserved hypothetical protein [Ricinus communis]
           gi|223527734|gb|EEF29839.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +3

Query: 102 FPVVFFDGECEIDIGNIGIYSTLDFNKLQSILSQKIGISPHQLTISLVFRKK 257
           FP V FDGE E  +GNI I  +L+F  LQSI+S+K+ +SPHQ +I L   KK
Sbjct: 4   FPAVLFDGEQETSLGNILISPSLNFKVLQSIISEKLVLSPHQFSIYLTDTKK 55


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