BLASTX nr result

ID: Coptis25_contig00011518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011518
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285711.1| PREDICTED: UPF0483 protein AGAP003155 [Vitis...    89   4e-16
ref|NP_567701.1| uncharacterized protein [Arabidopsis thaliana] ...    83   2e-14
emb|CAB45073.1| putative protein [Arabidopsis thaliana] gi|72692...    83   2e-14
gb|AAM63786.1| unknown [Arabidopsis thaliana]                          83   2e-14
gb|EAY94329.1| hypothetical protein OsI_16097 [Oryza sativa Indi...    81   1e-13

>ref|XP_002285711.1| PREDICTED: UPF0483 protein AGAP003155 [Vitis vinifera]
           gi|302142025|emb|CBI19228.3| unnamed protein product
           [Vitis vinifera]
          Length = 226

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/59 (71%), Positives = 48/59 (81%)
 Frame = +2

Query: 2   GEADFLRPYGTKLLEYFVDPFVIHHPKGHTVPRLDEKSLEIMNSFLEKIQNTLSCEDED 178
           GE DFLR YG +LLE FVDP VIHHPKGHTVPRLDEKSL+IM  FLE+IQ  L  ++E+
Sbjct: 166 GETDFLRQYGIELLESFVDPLVIHHPKGHTVPRLDEKSLQIMLGFLERIQKMLPEKEEE 224


>ref|NP_567701.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26451917|dbj|BAC43051.1| unknown protein [Arabidopsis
           thaliana] gi|88196765|gb|ABD43025.1| At4g24380
           [Arabidopsis thaliana] gi|332659495|gb|AEE84895.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 234

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 35/63 (55%), Positives = 51/63 (80%)
 Frame = +2

Query: 2   GEADFLRPYGTKLLEYFVDPFVIHHPKGHTVPRLDEKSLEIMNSFLEKIQNTLSCEDEDG 181
           GE DFL+PYGT+L+E + +P V+HHPKGHTVPRLDEKSLE + +F++ +++ +  ED++G
Sbjct: 166 GETDFLKPYGTQLIESYKNPVVVHHPKGHTVPRLDEKSLEKVTAFIDTLEHLVMEEDKNG 225

Query: 182 LTN 190
             N
Sbjct: 226 EEN 228


>emb|CAB45073.1| putative protein [Arabidopsis thaliana] gi|7269288|emb|CAB79348.1|
           putative protein [Arabidopsis thaliana]
          Length = 208

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 35/63 (55%), Positives = 51/63 (80%)
 Frame = +2

Query: 2   GEADFLRPYGTKLLEYFVDPFVIHHPKGHTVPRLDEKSLEIMNSFLEKIQNTLSCEDEDG 181
           GE DFL+PYGT+L+E + +P V+HHPKGHTVPRLDEKSLE + +F++ +++ +  ED++G
Sbjct: 140 GETDFLKPYGTQLIESYKNPVVVHHPKGHTVPRLDEKSLEKVTAFIDTLEHLVMEEDKNG 199

Query: 182 LTN 190
             N
Sbjct: 200 EEN 202


>gb|AAM63786.1| unknown [Arabidopsis thaliana]
          Length = 234

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 35/63 (55%), Positives = 51/63 (80%)
 Frame = +2

Query: 2   GEADFLRPYGTKLLEYFVDPFVIHHPKGHTVPRLDEKSLEIMNSFLEKIQNTLSCEDEDG 181
           GE DFL+PYGT+L+E + +P V+HHPKGHTVPRLDEKSLE + +F++ +++ +  ED++G
Sbjct: 166 GETDFLKPYGTQLIESYKNPVVVHHPKGHTVPRLDEKSLEKVTAFIDTLEHLVMEEDKNG 225

Query: 182 LTN 190
             N
Sbjct: 226 EEN 228


>gb|EAY94329.1| hypothetical protein OsI_16097 [Oryza sativa Indica Group]
          Length = 245

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/56 (64%), Positives = 45/56 (80%)
 Frame = +2

Query: 2   GEADFLRPYGTKLLEYFVDPFVIHHPKGHTVPRLDEKSLEIMNSFLEKIQNTLSCE 169
           G+ DFL+ +G KL+E +VDPF+I HPKGHTVPRLDEKSLEIM  FL+KI+   + E
Sbjct: 177 GDTDFLKTHGEKLIESYVDPFIIRHPKGHTVPRLDEKSLEIMLRFLDKIEKETALE 232


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