BLASTX nr result
ID: Coptis25_contig00011496
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00011496 (738 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514718.1| pentatricopeptide repeat-containing protein,... 76 6e-12 emb|CBI17453.3| unnamed protein product [Vitis vinifera] 76 8e-12 ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi... 76 8e-12 ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11 ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11 >ref|XP_002514718.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223546322|gb|EEF47824.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 399 Score = 76.3 bits (186), Expect = 6e-12 Identities = 34/48 (70%), Positives = 42/48 (87%) Frame = -3 Query: 736 VAWTAMITGYAQNAKPREALKLFESMRDVGVSTDEVTLVGGISACTLL 593 VAWTAM+TG++QNAKPREA++ FE M+D G+ TDEVTLVG ISAC+ L Sbjct: 239 VAWTAMVTGFSQNAKPREAIQFFERMQDAGIGTDEVTLVGVISACSQL 286 >emb|CBI17453.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 75.9 bits (185), Expect = 8e-12 Identities = 36/48 (75%), Positives = 41/48 (85%) Frame = -3 Query: 736 VAWTAMITGYAQNAKPREALKLFESMRDVGVSTDEVTLVGGISACTLL 593 VAWTAM+TGYAQNA+PREAL++FE M+ GV TDEVTLVG ISAC L Sbjct: 238 VAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQL 285 >ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like [Vitis vinifera] Length = 647 Score = 75.9 bits (185), Expect = 8e-12 Identities = 36/48 (75%), Positives = 41/48 (85%) Frame = -3 Query: 736 VAWTAMITGYAQNAKPREALKLFESMRDVGVSTDEVTLVGGISACTLL 593 VAWTAM+TGYAQNA+PREAL++FE M+ GV TDEVTLVG ISAC L Sbjct: 238 VAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQL 285 >ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like [Cucumis sativus] Length = 650 Score = 73.6 bits (179), Expect = 4e-11 Identities = 33/48 (68%), Positives = 40/48 (83%) Frame = -3 Query: 736 VAWTAMITGYAQNAKPREALKLFESMRDVGVSTDEVTLVGGISACTLL 593 VAWTAM+TGYAQN +P+EAL+ F+ M+DVG+ TDEVTL G ISAC L Sbjct: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288 >ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like [Cucumis sativus] Length = 650 Score = 73.6 bits (179), Expect = 4e-11 Identities = 33/48 (68%), Positives = 40/48 (83%) Frame = -3 Query: 736 VAWTAMITGYAQNAKPREALKLFESMRDVGVSTDEVTLVGGISACTLL 593 VAWTAM+TGYAQN +P+EAL+ F+ M+DVG+ TDEVTL G ISAC L Sbjct: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288