BLASTX nr result
ID: Coptis25_contig00011482
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011482
(677 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca... 150 2e-34
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta... 140 3e-31
emb|CBI35091.3| unnamed protein product [Vitis vinifera] 126 4e-27
ref|XP_003598470.1| Resistance protein [Medicago truncatula] gi|... 126 4e-27
emb|CAN79463.1| hypothetical protein VITISV_000507 [Vitis vinifera] 125 1e-26
>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 906
Score = 150 bits (379), Expect = 2e-34
Identities = 91/215 (42%), Positives = 131/215 (60%), Gaps = 2/215 (0%)
Frame = +3
Query: 9 LVNLQTLKLNGCKNLRSLPEGIGELSNLRHLEVEDTQRLNYYPRGGIERLRQLRTLSKFV 188
L NL LKL+GC+ L LP G+G+L NLR+L +E+T+ L+ P+G I RL LRTLSKF
Sbjct: 620 LYNLLALKLHGCRRLHRLPRGLGKLINLRYLNIEETESLSVLPQG-IGRLSNLRTLSKFC 678
Query: 189 VRDGSKGSVIGELGNLNFLKGRIYITGLRHVKSVNEAKQAELQKKKNIS--DLVLNFGDK 362
+ + +G +GEL NLN L+G + I+GL V++VNE +A L+ K+++ DL +FG +
Sbjct: 679 IGENREGCNVGELKNLNHLRGHLEISGLEKVRNVNEVMEANLKNKEHLRSLDLAFSFGGQ 738
Query: 363 EYERDFGHVSNKEYIRRMEGVLENLEPHKESLERLVIRYYVGFMLPPWMLSVEESVLSNI 542
E + VLE L+PH +LE L++ Y G +LP WM ++L+ +
Sbjct: 739 EL---------------ITNVLEALQPH-PNLEALLVYDYGGSILPSWM-----TLLTKM 777
Query: 543 VDLKLYWCPNLKVLPALGKLQFLEQLWLEDLISVK 647
DLKL C N K LP+LGKL LE+L + +VK
Sbjct: 778 KDLKLLRCVNCKELPSLGKLPSLEKLLIGHFNNVK 812
>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
gi|223542676|gb|EEF44213.1| leucine-rich
repeat-containing protein, putative [Ricinus communis]
Length = 940
Score = 140 bits (352), Expect = 3e-31
Identities = 92/223 (41%), Positives = 128/223 (57%), Gaps = 1/223 (0%)
Frame = +3
Query: 6 SLVNLQTLKLNGCKNLRSLPEGIGELSNLRHLEVEDTQRLNYYPRGGIERLRQLRTLSKF 185
+L NLQTL L+ CK L+ LP G+G+L NLRHL + +T LN +P+ GIERL LR L+KF
Sbjct: 635 NLYNLQTLNLDRCKRLQRLPGGLGKLKNLRHLNLRETDCLNIFPQ-GIERLSNLRMLTKF 693
Query: 186 VVRDGSKGSVIGELGNLNFLKGRIYITGLRHVKSVNEAKQAELQKKKNIS-DLVLNFGDK 362
VV + +G I EL NL +L+G + I+ L V ++AK+A+L K S DLV +FG K
Sbjct: 694 VVSENKEGCNIAELKNLKYLRGHLEISRLEKVVDTDKAKEADLTNKHLQSLDLVFSFGVK 753
Query: 363 EYERDFGHVSNKEYIRRMEGVLENLEPHKESLERLVIRYYVGFMLPPWMLSVEESVLSNI 542
E ME V+E L+PH E LE L + Y G + P W+ ++L+ +
Sbjct: 754 E---------------AMENVIEVLQPHPE-LEALQVYDYGGSIFPNWI-----TLLTKL 792
Query: 543 VDLKLYWCPNLKVLPALGKLQFLEQLWLEDLISVKHLGLLRVG 671
L+L C N LP LGKL LE+L + S+K + +G
Sbjct: 793 KHLRLLSCINCLQLPPLGKLPSLEKLLIGHFNSLKSVSAELLG 835
>emb|CBI35091.3| unnamed protein product [Vitis vinifera]
Length = 690
Score = 126 bits (316), Expect = 4e-27
Identities = 82/215 (38%), Positives = 122/215 (56%)
Frame = +3
Query: 9 LVNLQTLKLNGCKNLRSLPEGIGELSNLRHLEVEDTQRLNYYPRGGIERLRQLRTLSKFV 188
L NLQ L L C++LR LP IG L +LRHL++ DT L P + L L+TL KF+
Sbjct: 311 LYNLQALILRECRSLRMLPTSIGNLVDLRHLDITDTLSLKKMP-PHLGNLVNLQTLPKFI 369
Query: 189 VRDGSKGSVIGELGNLNFLKGRIYITGLRHVKSVNEAKQAELQKKKNISDLVLNFGDKEY 368
V + S I EL L+ ++G + I GL +V +A +L+ K NI DL + +G+
Sbjct: 370 VEKNNSSSSIKELKKLSNIRGTLSILGLHNVADAQDAMDVDLKGKHNIKDLTMEWGN--- 426
Query: 369 ERDFGHVSNKEYIRRMEGVLENLEPHKESLERLVIRYYVGFMLPPWMLSVEESVLSNIVD 548
DF N++ M+ VLE L+PHK +LE+L I +Y G + P WM + S++ V
Sbjct: 427 --DFDDTRNEQ--NEMQ-VLELLQPHK-NLEKLTISFYGGGIFPSWMRNPSFSLM---VQ 477
Query: 549 LKLYWCPNLKVLPALGKLQFLEQLWLEDLISVKHL 653
L L C N +LP+LG+L L+ L +E + +K++
Sbjct: 478 LCLKGCRNCTLLPSLGQLSSLKNLRIEGMSGIKNI 512
>ref|XP_003598470.1| Resistance protein [Medicago truncatula] gi|355487518|gb|AES68721.1|
Resistance protein [Medicago truncatula]
Length = 1247
Score = 126 bits (316), Expect = 4e-27
Identities = 85/216 (39%), Positives = 128/216 (59%)
Frame = +3
Query: 9 LVNLQTLKLNGCKNLRSLPEGIGELSNLRHLEVEDTQRLNYYPRGGIERLRQLRTLSKFV 188
L NLQTL L+ C +L LPE IG L NLRHL++ DT +L P I +L+ L+TLS FV
Sbjct: 630 LYNLQTLLLSKCSSLTELPEDIGNLVNLRHLDLSDT-KLKVMPIQ-IAKLQNLQTLSSFV 687
Query: 189 VRDGSKGSVIGELGNLNFLKGRIYITGLRHVKSVNEAKQAELQKKKNISDLVLNFGDKEY 368
V S G IGEL L+G++ I+ L++V +++A A L+KK+ I +L L E+
Sbjct: 688 VSRQSNGLKIGELRKFPHLQGKLSISKLQNVTDLSDAVHANLEKKEEIDELTL-----EW 742
Query: 369 ERDFGHVSNKEYIRRMEGVLENLEPHKESLERLVIRYYVGFMLPPWMLSVEESVLSNIVD 548
+RD S E + VLE L+P +L++L I+++ G P W+ +S N++
Sbjct: 743 DRDTTEDSQMERL-----VLEQLQP-STNLKKLTIQFFGGTSFPNWL---GDSSFRNMMY 793
Query: 549 LKLYWCPNLKVLPALGKLQFLEQLWLEDLISVKHLG 656
L++ C + LP LG+L L++L++ LISVK +G
Sbjct: 794 LRISGCDHCWSLPPLGELLSLKELFISGLISVKMVG 829
>emb|CAN79463.1| hypothetical protein VITISV_000507 [Vitis vinifera]
Length = 970
Score = 125 bits (313), Expect = 1e-26
Identities = 86/224 (38%), Positives = 126/224 (56%), Gaps = 8/224 (3%)
Frame = +3
Query: 9 LVNLQTLKLNGCKNLRSLPEGIGELSNLRHLEVEDTQRLNYYPRGGIERLRQLRTLSKFV 188
L NLQTL + GC +L LP+ +G+L NLRHL+ T L P+G I RL L+TL KF
Sbjct: 654 LYNLQTLNIRGCDSLVQLPQAMGKLINLRHLQNFLTILLKGLPKG-ISRLNSLQTLEKFT 712
Query: 189 VR-DGSKGSVIGELGNLNFLKGRIYITGLRHVKSVNEAKQAELQKKKNISDLVLNFGDKE 365
V DG IG+LGNL+ L+G + I GL++V++ EA++A L+ K +I L L F +E
Sbjct: 713 VSSDGHNECNIGDLGNLSNLRGELEIRGLQNVENAREAREANLKNKIHIHHLTLVFDPQE 772
Query: 366 -------YERDFGHVSNKEYIRRMEGVLENLEPHKESLERLVIRYYVGFMLPPWMLSVEE 524
R + E + + V+E L+PH +L+ L IR Y P WM+
Sbjct: 773 GTNYVVGAPRSYSTNLLPEVKKGPKSVVEALQPH-PNLKSLCIRGYGDTEWPGWMM---R 828
Query: 525 SVLSNIVDLKLYWCPNLKVLPALGKLQFLEQLWLEDLISVKHLG 656
S L+ + +L+L C + +P LG+L LE L ++ + VKH+G
Sbjct: 829 SSLTQLKNLELSCCSDCLCMPPLGELPVLETLEIKGVERVKHIG 872