BLASTX nr result

ID: Coptis25_contig00011481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011481
         (1443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier f...   463   e-128
ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative...   456   e-126
ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|2...   451   e-124
ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|2...   448   e-123
emb|CAN77030.1| hypothetical protein VITISV_015341 [Vitis vinifera]   448   e-123

>ref|XP_002281134.1| PREDICTED: mitochondrial substrate carrier family protein Q [Vitis
            vinifera] gi|297737006|emb|CBI26207.3| unnamed protein
            product [Vitis vinifera]
          Length = 319

 Score =  463 bits (1191), Expect = e-128
 Identities = 242/321 (75%), Positives = 274/321 (85%), Gaps = 2/321 (0%)
 Frame = +1

Query: 175  LGMDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSDVLWEAIST 354
            +G D ESL EATSGA+GAL+ST+ILYPLDTCKTKYQAEV  H QQKYR +SDVLWEAIST
Sbjct: 1    MGFDTESLLEATSGAVGALVSTTILYPLDTCKTKYQAEVSGHHQQKYRNISDVLWEAIST 60

Query: 355  GQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLERSGTKSIGTRXXXXXXXXXXXXX 534
             QVLSLYQGLGTKNLQSFISQFVYFYGYS+FKRLYLE+SG K+I T+             
Sbjct: 61   NQVLSLYQGLGTKNLQSFISQFVYFYGYSFFKRLYLEKSGAKTIRTKANLIVAAAAGACT 120

Query: 535  XXVTQPLELASSRMQTSAFGKSKGLYETLTEGTWIEAFDGLGISLLLTSNPAIQYTVFDQ 714
              +TQPL+ ASSRMQTSAFGKSKGL++TL+EGTW EAFDGLGISLLLT+NP+IQYTVFDQ
Sbjct: 121  VLMTQPLDTASSRMQTSAFGKSKGLWKTLSEGTWKEAFDGLGISLLLTANPSIQYTVFDQ 180

Query: 715  LKSRLLMRQRSSKADTESSPEALSAFSAFVLGAVSKSIATCLTYPAIRCKVMIQAADVSE 894
            LK RLL  + S+K  TESSPEALSAFSAFVLGAVSK IAT +TYPAIRCKVM+QAA+  E
Sbjct: 181  LKLRLLKGKLSNKTGTESSPEALSAFSAFVLGAVSKCIATTVTYPAIRCKVMLQAAESDE 240

Query: 895  DG--KDAQPKQSKTISGTLHSIWKREGLPGFFKGLHAQILKTVLSSALLLMIKEKITKTT 1068
            DG  K+AQP+  KT+S T++SIWKREGL GFFKGL AQILKTVLSSALLLMIKEKITKTT
Sbjct: 241  DGTTKEAQPR--KTVSDTIYSIWKREGLLGFFKGLEAQILKTVLSSALLLMIKEKITKTT 298

Query: 1069 WVLMLALQRSLLVTRSRLKSS 1131
            WV++LAL+R L V R+RLK++
Sbjct: 299  WVILLALRRYLTVNRTRLKAA 319


>ref|XP_002512372.1| peroxisomal membrane protein pmp34, putative [Ricinus communis]
            gi|223548333|gb|EEF49824.1| peroxisomal membrane protein
            pmp34, putative [Ricinus communis]
          Length = 318

 Score =  456 bits (1173), Expect = e-126
 Identities = 238/319 (74%), Positives = 271/319 (84%)
 Frame = +1

Query: 175  LGMDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSDVLWEAIST 354
            + +DLESL+EATSGAIG+LLST+ILYPLDTCKTKYQAEVR H Q+KYR LSDVL+EAIS 
Sbjct: 1    MAVDLESLSEATSGAIGSLLSTTILYPLDTCKTKYQAEVRAHGQRKYRHLSDVLFEAISN 60

Query: 355  GQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLERSGTKSIGTRXXXXXXXXXXXXX 534
            GQ+LSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLE+SG K IGT+             
Sbjct: 61   GQILSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGFKKIGTKANLVLAAAAGACT 120

Query: 535  XXVTQPLELASSRMQTSAFGKSKGLYETLTEGTWIEAFDGLGISLLLTSNPAIQYTVFDQ 714
              VTQPL+ ASSRMQTSAFGKSKGL++TLTEG W +AFDGLGISLLLTSNPAIQYTVFDQ
Sbjct: 121  AIVTQPLDTASSRMQTSAFGKSKGLWQTLTEGNWGDAFDGLGISLLLTSNPAIQYTVFDQ 180

Query: 715  LKSRLLMRQRSSKADTESSPEALSAFSAFVLGAVSKSIATCLTYPAIRCKVMIQAADVSE 894
            LK RLL + + + AD+ SS EALSAFSAFVLGAVSKSIAT +TYPAIRCKVMIQAAD  +
Sbjct: 181  LKQRLL-KGKQNTADSSSSVEALSAFSAFVLGAVSKSIATVITYPAIRCKVMIQAADSDD 239

Query: 895  DGKDAQPKQSKTISGTLHSIWKREGLPGFFKGLHAQILKTVLSSALLLMIKEKITKTTWV 1074
            + K  + K  KT+ G + +IWKREG+ GFFKGL AQILKTVLSSALLLMIKEKI+++TWV
Sbjct: 240  ESKKGKSKSRKTVPGVVCAIWKREGVLGFFKGLQAQILKTVLSSALLLMIKEKISRSTWV 299

Query: 1075 LMLALQRSLLVTRSRLKSS 1131
            L+LA++R LLV RSRLKS+
Sbjct: 300  LILAIRRYLLVPRSRLKSA 318


>ref|XP_002328561.1| predicted protein [Populus trichocarpa] gi|222838276|gb|EEE76641.1|
            predicted protein [Populus trichocarpa]
          Length = 317

 Score =  451 bits (1159), Expect = e-124
 Identities = 235/320 (73%), Positives = 268/320 (83%), Gaps = 1/320 (0%)
 Frame = +1

Query: 175  LGMDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSDVLWEAIST 354
            +G+DLES++EATSGAIG+LLST+ILYPLDTCKTKYQAE R H QQKYR+L+DVLWEAIST
Sbjct: 1    MGVDLESVSEATSGAIGSLLSTTILYPLDTCKTKYQAEARAHGQQKYRKLTDVLWEAIST 60

Query: 355  GQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLERSGTKSIGTRXXXXXXXXXXXXX 534
             QVLSLYQG+GTKNLQSFISQFVYFYGYSYFKRLY+E+SG K IGT+             
Sbjct: 61   RQVLSLYQGIGTKNLQSFISQFVYFYGYSYFKRLYMEKSGFKKIGTKANLIIAAAAGACT 120

Query: 535  XXVTQPLELASSRMQTSAFGKSKGLYETLTEGTWIEAFDGLGISLLLTSNPAIQYTVFDQ 714
              +TQPL+ ASSRMQTSAFGKSKGL+ETLTEG+W +AFDGLGISLLLTSNPAIQYTVFDQ
Sbjct: 121  AVITQPLDTASSRMQTSAFGKSKGLWETLTEGSWSDAFDGLGISLLLTSNPAIQYTVFDQ 180

Query: 715  LKSRLLMRQRSSKADTESSPEALSAFSAFVLGAVSKSIATCLTYPAIRCKVMIQAADVSE 894
            LK +LLMR   +K   E +   LSAFSAFVLGA+SKSIAT LTYPAIRCKV+I+AAD  +
Sbjct: 181  LKQKLLMR---NKNGAEKTAVTLSAFSAFVLGALSKSIATFLTYPAIRCKVVIEAADTDD 237

Query: 895  D-GKDAQPKQSKTISGTLHSIWKREGLPGFFKGLHAQILKTVLSSALLLMIKEKITKTTW 1071
            D  K +Q K  KTIS  + +IWKREG+ GFFKGLHAQILKTVLSSALLLMIKEKI  TTW
Sbjct: 238  DETKKSQRKSKKTISAVICAIWKREGIFGFFKGLHAQILKTVLSSALLLMIKEKIAATTW 297

Query: 1072 VLMLALQRSLLVTRSRLKSS 1131
            VL+LA++R L +TR RLKS+
Sbjct: 298  VLILAIRRYLFLTRGRLKST 317


>ref|XP_002314718.1| predicted protein [Populus trichocarpa] gi|222863758|gb|EEF00889.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  448 bits (1153), Expect = e-123
 Identities = 234/319 (73%), Positives = 264/319 (82%)
 Frame = +1

Query: 175  LGMDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSDVLWEAIST 354
            +  DLESL+EATSGAIGAL+ST+I YPLDTCKTKYQAEVR H QQKYR +SDV WEAI++
Sbjct: 1    MAFDLESLSEATSGAIGALVSTTISYPLDTCKTKYQAEVRAHHQQKYRNISDVFWEAIAS 60

Query: 355  GQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLERSGTKSIGTRXXXXXXXXXXXXX 534
             QVLSLYQGLGTKNLQSFISQFVYFYGYS+FKRLYLE+S  K+IGT+             
Sbjct: 61   RQVLSLYQGLGTKNLQSFISQFVYFYGYSFFKRLYLEKSRNKTIGTKANLIVAAAAGACT 120

Query: 535  XXVTQPLELASSRMQTSAFGKSKGLYETLTEGTWIEAFDGLGISLLLTSNPAIQYTVFDQ 714
              VTQPL+ ASS+MQTS FGKS+GL++TL+EGTW EAFDGLGISLLLTSNP+IQYTVFDQ
Sbjct: 121  VIVTQPLDTASSKMQTSEFGKSRGLWKTLSEGTWSEAFDGLGISLLLTSNPSIQYTVFDQ 180

Query: 715  LKSRLLMRQRSSKADTESSPEALSAFSAFVLGAVSKSIATCLTYPAIRCKVMIQAADVSE 894
            LK RLL RQ S K+  ESSPEALSAFSAFVLGAVSK IATC+TYPAIRCKV +QAA+  E
Sbjct: 181  LKRRLLERQLSKKSSIESSPEALSAFSAFVLGAVSKCIATCVTYPAIRCKVTLQAAESDE 240

Query: 895  DGKDAQPKQSKTISGTLHSIWKREGLPGFFKGLHAQILKTVLSSALLLMIKEKITKTTWV 1074
               +    ++KTISG L+SIWK EG  GFFKGL AQ LKTVLSSAL LMIKEKI+KTTW 
Sbjct: 241  SEIEEVQAKTKTISGALYSIWKNEGSAGFFKGLLAQNLKTVLSSALHLMIKEKISKTTWF 300

Query: 1075 LMLALQRSLLVTRSRLKSS 1131
            LMLAL+R L VTRSR+KS+
Sbjct: 301  LMLALKRYLFVTRSRIKST 319


>emb|CAN77030.1| hypothetical protein VITISV_015341 [Vitis vinifera]
          Length = 322

 Score =  448 bits (1152), Expect = e-123
 Identities = 236/320 (73%), Positives = 266/320 (83%), Gaps = 1/320 (0%)
 Frame = +1

Query: 175  LGMDLESLTEATSGAIGALLSTSILYPLDTCKTKYQAEVRDHAQQKYRRLSDVLWEAIST 354
            + +DL+SL+EATSGA+GALLST+ILYPLDTCKTKYQAEV+ H QQKYR LSDVLWEAIST
Sbjct: 1    MAVDLQSLSEATSGAVGALLSTTILYPLDTCKTKYQAEVKAHGQQKYRNLSDVLWEAIST 60

Query: 355  GQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLERSGTKSIGTRXXXXXXXXXXXXX 534
             Q++SLYQGLGTKNLQSFI+QFVYFYGYS FKRLYLERSG  SIGT+             
Sbjct: 61   RQIVSLYQGLGTKNLQSFIAQFVYFYGYSCFKRLYLERSGFNSIGTKANLILAAAAGACT 120

Query: 535  XXVTQPLELASSRMQTSAFGKSKGLYETLTEGTWIEAFDGLGISLLLTSNPAIQYTVFDQ 714
              VTQPL+ ASSRMQTSAFGKSKGL++TLT GTW EAFDGLGISLLLT+NPAIQYTVFDQ
Sbjct: 121  AIVTQPLDTASSRMQTSAFGKSKGLWQTLTAGTWSEAFDGLGISLLLTTNPAIQYTVFDQ 180

Query: 715  LKSRLLMRQRSSKADTESSPEALSAFSAFVLGAVSKSIATCLTYPAIRCKVMIQAADVSE 894
            LK R L R ++   +  SSPEALSA SAF+LGA+SKSIAT LTYPAIRCKVMIQAAD S+
Sbjct: 181  LKQRHLKRNQNI-TEKGSSPEALSALSAFMLGAISKSIATFLTYPAIRCKVMIQAADTSD 239

Query: 895  D-GKDAQPKQSKTISGTLHSIWKREGLPGFFKGLHAQILKTVLSSALLLMIKEKITKTTW 1071
            D  K A  K  KT+ G L++IWKREG+PGFFKGL AQILKTVLSSALLLMIKEKI   TW
Sbjct: 240  DEAKKAPQKSHKTVHGVLYAIWKREGVPGFFKGLQAQILKTVLSSALLLMIKEKIAAGTW 299

Query: 1072 VLMLALQRSLLVTRSRLKSS 1131
            VL+LA ++ LL+T SRLKS+
Sbjct: 300  VLILAARKYLLLTGSRLKSA 319


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