BLASTX nr result

ID: Coptis25_contig00011478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011478
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302309.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_004162244.1| PREDICTED: uncharacterized LOC101209980 [Cuc...    56   3e-06
ref|XP_004152753.1| PREDICTED: uncharacterized protein LOC101209...    56   3e-06
ref|XP_002284066.1| PREDICTED: uncharacterized protein LOC100257...    56   3e-06
ref|XP_003523809.1| PREDICTED: uncharacterized protein LOC100777...    55   4e-06

>ref|XP_002302309.1| predicted protein [Populus trichocarpa] gi|222844035|gb|EEE81582.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = +3

Query: 6   QNYQQHPQSQPPVYNINKNDFRNVVQRLTGSTAH 107
           Q  QQ  Q QPPVYNINKNDFR+VVQ+LTGS AH
Sbjct: 88  QQQQQQHQHQPPVYNINKNDFRDVVQKLTGSPAH 121


>ref|XP_004162244.1| PREDICTED: uncharacterized LOC101209980 [Cucumis sativus]
          Length = 309

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/36 (75%), Positives = 29/36 (80%), Gaps = 2/36 (5%)
 Frame = +3

Query: 6   QNYQQHPQSQ--PPVYNINKNDFRNVVQRLTGSTAH 107
           QN Q  PQ Q  PPVYNINKNDFR+VVQ+LTGS AH
Sbjct: 77  QNIQAQPQQQHQPPVYNINKNDFRDVVQKLTGSPAH 112


>ref|XP_004152753.1| PREDICTED: uncharacterized protein LOC101209980 [Cucumis sativus]
          Length = 309

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/36 (75%), Positives = 29/36 (80%), Gaps = 2/36 (5%)
 Frame = +3

Query: 6   QNYQQHPQSQ--PPVYNINKNDFRNVVQRLTGSTAH 107
           QN Q  PQ Q  PPVYNINKNDFR+VVQ+LTGS AH
Sbjct: 77  QNIQAQPQQQHQPPVYNINKNDFRDVVQKLTGSPAH 112


>ref|XP_002284066.1| PREDICTED: uncharacterized protein LOC100257517 [Vitis vinifera]
          Length = 335

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = +3

Query: 15  QQHPQSQPPVYNINKNDFRNVVQRLTGSTAH 107
           QQ  Q QPPVYNINKNDFR+VVQ+LTGS AH
Sbjct: 85  QQQQQHQPPVYNINKNDFRDVVQKLTGSPAH 115


>ref|XP_003523809.1| PREDICTED: uncharacterized protein LOC100777442 [Glycine max]
          Length = 287

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +3

Query: 15  QQHPQSQPPVYNINKNDFRNVVQRLTGSTAH 107
           QQ+ Q QPPVYNINKNDFR+VVQ+LTGS AH
Sbjct: 68  QQNLQHQPPVYNINKNDFRDVVQKLTGSPAH 98


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