BLASTX nr result

ID: Coptis25_contig00011477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011477
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239788.1| LRR receptor-like serine/threonine-protein k...   114   6e-24
ref|XP_003631527.1| PREDICTED: LRR receptor-like serine/threonin...   114   1e-23
ref|XP_002266702.2| PREDICTED: LRR receptor-like serine/threonin...   114   1e-23
ref|XP_004145576.1| PREDICTED: LRR receptor-like serine/threonin...   112   2e-23
ref|XP_002519895.1| BRASSINOSTEROID INSENSITIVE 1-associated rec...   112   3e-23

>ref|NP_001239788.1| LRR receptor-like serine/threonine-protein kinase FEI 1 precursor
           [Glycine max] gi|223452450|gb|ACM89552.1| leucine-rich
           repeat transmembrane protein kinase [Glycine max]
          Length = 590

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = +1

Query: 166 KALAITPDGEALLSFKAAIVGSDGVLLHWNQEDPDPCGWKGVKCD-AMKRVVFLSLPYHK 342
           K+ AITPDGE LLSF+ ++V SDG+LL W  EDPDPC WKGVKCD   KRV  LSL +HK
Sbjct: 25  KSGAITPDGEVLLSFRTSVVSSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLSLSHHK 84

Query: 343 LSGSISPDIGKLNHLRIL 396
           LSGSISPD+GKL +LR+L
Sbjct: 85  LSGSISPDLGKLENLRVL 102


>ref|XP_003631527.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI
           1-like isoform 2 [Vitis vinifera]
          Length = 592

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
 Frame = +1

Query: 175 AITPDGEALLSFKAAIVGSDGVLLHWNQEDPDPCGWKGVKCD-AMKRVVFLSLPYHKLSG 351
           A++PDGEALLSF+ +IV SDGVL  W  EDPDPCGWKGV CD   KRV++L+LP+HKLSG
Sbjct: 28  ALSPDGEALLSFRNSIVSSDGVLRQWRPEDPDPCGWKGVTCDLETKRVIYLNLPHHKLSG 87

Query: 352 SISPDIGKLNHLRIL 396
           SISPDIGKL  L++L
Sbjct: 88  SISPDIGKLELLKLL 102


>ref|XP_002266702.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI
           1-like isoform 1 [Vitis vinifera]
           gi|296085503|emb|CBI29235.3| unnamed protein product
           [Vitis vinifera]
          Length = 596

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
 Frame = +1

Query: 175 AITPDGEALLSFKAAIVGSDGVLLHWNQEDPDPCGWKGVKCD-AMKRVVFLSLPYHKLSG 351
           A++PDGEALLSF+ +IV SDGVL  W  EDPDPCGWKGV CD   KRV++L+LP+HKLSG
Sbjct: 28  ALSPDGEALLSFRNSIVSSDGVLRQWRPEDPDPCGWKGVTCDLETKRVIYLNLPHHKLSG 87

Query: 352 SISPDIGKLNHLRIL 396
           SISPDIGKL  L++L
Sbjct: 88  SISPDIGKLELLKLL 102


>ref|XP_004145576.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI
           1-like [Cucumis sativus]
           gi|449485054|ref|XP_004157058.1| PREDICTED: LRR
           receptor-like serine/threonine-protein kinase FEI 1-like
           [Cucumis sativus]
          Length = 599

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/78 (65%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
 Frame = +1

Query: 166 KALAITPDGEALLSFKAAIVGSDGVLLHWNQEDPDPCGWKGVKCD-AMKRVVFLSLPYHK 342
           ++  IT DGEALLSF+A+I+ SDGVLL W  E+P PC WKG+ CD   KRV++LSLPYHK
Sbjct: 25  RSSGITSDGEALLSFRASILDSDGVLLQWKPEEPHPCKWKGITCDPKTKRVIYLSLPYHK 84

Query: 343 LSGSISPDIGKLNHLRIL 396
           LSGS+SP++GKL+HL+IL
Sbjct: 85  LSGSLSPELGKLDHLKIL 102


>ref|XP_002519895.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
           precursor, putative [Ricinus communis]
           gi|223540941|gb|EEF42499.1| BRASSINOSTEROID INSENSITIVE
           1-associated receptor kinase 1 precursor, putative
           [Ricinus communis]
          Length = 596

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = +1

Query: 163 QKALAITPDGEALLSFKAAIVGSDGVLLHWNQEDPDPCGWKGVKCD-AMKRVVFLSLPYH 339
           QK+ AI  DGEALL+FK AIV SDG+L  W  EDPDPC W+GV CD   KRV++LSL  H
Sbjct: 24  QKSGAINSDGEALLNFKNAIVSSDGILPLWRPEDPDPCNWRGVTCDQKTKRVIYLSLKNH 83

Query: 340 KLSGSISPDIGKLNHLRIL 396
           KLSGSISPDIGKL HLRIL
Sbjct: 84  KLSGSISPDIGKLQHLRIL 102


Top