BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011474
         (1575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   147   8e-33
ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   133   1e-28
ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   126   1e-26
ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   122   3e-25
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   120   8e-25

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  147 bits (371), Expect = 8e-33
 Identities = 138/451 (30%), Positives = 213/451 (47%), Gaps = 20/451 (4%)
 Frame = -2

Query: 1568 RTKVMHR*PHCSRMKGNCSAQQTKDMISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNV 1389
            + K + R     ++K        +  I NLP+ +L  I+S L  E A++T+ LSKKWL++
Sbjct: 2    KAKSLTRKTKRKKLKAEKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHL 61

Query: 1388 CTSLTNIEFDQVKFERWARGKRQFKDFVNQTLVLHGGLDIDKFSIYIDIGAISMSNVNSW 1209
              S TN+ F  +K  +    ++ F DFV++ L L G  +I +F +  ++     S V +W
Sbjct: 62   WKSTTNLTFFGLKSPK----RKLFMDFVDRVLALRGPSNIVQFYLSCEV-KDDPSRVGTW 116

Query: 1208 IYFAVNHNVKE--VDIAGYYGYFEKLPCCLFTCGTLRML--TLEYVNLQLPTMVGLPKLK 1041
            I  AVN NVK+  +++  +   F  LP CLF C TL  L   + Y+ L+LP+ + L  LK
Sbjct: 117  ISAAVNRNVKDLYLELRDFEASF-VLPHCLFNCETLTELEINMPYI-LKLPSSISLSCLK 174

Query: 1040 SLKIKFVRFFDENSTAQLFSSCPLLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFY 861
             L +  V F D++ST QLF S P L EL I  C + ++     V IS+P L+S+ +    
Sbjct: 175  ILNLYEVIFTDDHSTQQLF-SLPNLVELEIHECNWMNL---VAVSISAPKLQSLDIHE-- 228

Query: 860  LPPVKISTSNL--CNIRYYGN-----------PPEICLETLSSLSNV--DFEFTSRLRIY 726
              P + S ++L  C++R +G              + CL   S +      F    + R  
Sbjct: 229  --PCQSSPASLGGCHVRIFGTHLADFTIIGTLSNDYCLYESSVVETCISIFSAADKPRQT 286

Query: 725  YTRASAILMGLQNVVRMVLRGCFIELLSRNEGSSARLPTSCFSLEYLQLDVKPSKEQVQV 546
              RAS +L G+ +   + L    +++L  +       P    +L  L  + + S      
Sbjct: 287  AYRASKLLEGISSAQSLCLTTNVVDVLD-DAPELLAFPLEFRNLTSLLFESEESNLHSDG 345

Query: 545  VILLLRNYPNLKHLRI-SVKEPTRRLNLHELWXXXXXXXXXXXXGSSMDILDHLKTVDVE 369
               ++ N P+L  L+   V  P    N  E W             S    L  LK + V 
Sbjct: 346  FWHIIYNSPHLIALQFYGVSMPKVPSNCREDW---------TLDPSPPCFLSCLKFIQVG 396

Query: 368  SFGGSKIELDLVRYLLKNANILEKLNIIYSG 276
             FGG + ELD V +LLKNA  LE ++IIYSG
Sbjct: 397  RFGGDEKELDAVGFLLKNATALESMDIIYSG 427


>ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355477724|gb|AES58927.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 428

 Score =  133 bits (335), Expect = 1e-28
 Identities = 117/449 (26%), Positives = 207/449 (46%), Gaps = 10/449 (2%)
 Frame = -2

Query: 1496 DMISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTNIEFDQVKFERWARGKRQF 1317
            D IS L   ++ +I+S LP+ +A++T+ LS KW     ++ N+ FD+      ++    F
Sbjct: 7    DRISYLLGDVIDKILSHLPIREAVRTSVLSNKWRYKWATIPNLVFDKQCVSATSKCSELF 66

Query: 1316 KD-------FVNQTLVLHGGLDIDKFSI-YIDIGAISMSNVNSWIYFAVNHNVKEVDIAG 1161
             D        ++Q L+L+ G  I+KF I    +  IS + ++ WI+     ++KE+ +  
Sbjct: 67   LDMEGKLMEIIDQVLLLYSG-PINKFQISRCGVNLISETALDRWIFHLTKRSIKELVLQI 125

Query: 1160 YYGYFEKLPCCLFTCGTLRMLTLEYVNLQLP-TMVGLPKLKSLKIKFVRFFDENSTAQLF 984
                  K+P CLF+C +L  LTL Y  L+ P T+ GL  LKSL +  V    + +   L 
Sbjct: 126  SERKLYKIPWCLFSCQSLHHLTLYYCLLKPPSTIEGLKNLKSLDLDHVS-MSQYAFENLI 184

Query: 983  SSCPLLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPPVKISTSNLCNIRYYGN 804
            SSCPLLE L ++     +++    + I +P+LK + +   +     IS  N   + Y   
Sbjct: 185  SSCPLLENLTLT-----ELDGFTQINIHAPNLKVLDICGKF---EDISFDNTFQLDYVFV 236

Query: 803  PPEICLETLSSLSNVDFEFTSRLRIYYTRASAILMGLQNVVRMVLRGCFIELLSRNEGSS 624
               + L + S+ S +    ++ L  +          L ++  +V+ G F++ L+      
Sbjct: 237  DLSLYLNSESNQSRLHGSPSNLLNFF--------AHLHHIHGLVINGYFLKYLAAG-AVP 287

Query: 623  ARLPTSCFSLEYLQLDVK-PSKEQVQVVILLLRNYPNLKHLRISVKEPTRRLNLHELWXX 447
             +LPT C +L YL   +     +++   + + R+ PNLK L I  K   + + L   +  
Sbjct: 288  VKLPTPCINLTYLWFSINFYDFKEISTALCVFRSSPNLKELNIFAKHEKKTIVLAPAFFC 347

Query: 446  XXXXXXXXXXGSSMDILDHLKTVDVESFGGSKIELDLVRYLLKNANILEKLNIIYSGKNG 267
                           +L  ++ V +E   G K ELD +R+LL ++ +LEK+ +  +   G
Sbjct: 348  WEDIFL------EPSMLTRVRHVGIEGISGIKSELDFMRFLLLHSPVLEKMRVKPNFNVG 401

Query: 266  KKDDVXXXXXXXXXXXSFTKASLSAEISF 180
             K               F +AS  AE+ +
Sbjct: 402  SK--------LMSELLRFKRASAQAEVVY 422


>ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355477725|gb|AES58928.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 657

 Score =  126 bits (317), Expect = 1e-26
 Identities = 98/341 (28%), Positives = 171/341 (50%), Gaps = 6/341 (1%)
 Frame = -2

Query: 1496 DMISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTNIEFDQ----VKFERWARG 1329
            D IS LP  ++ RI+S LP+ D ++T+ LS KW     ++ N+ FD        E  A  
Sbjct: 323  DRISVLPGDVIDRILSCLPIRDVVRTSILSNKWRYKWITIPNLVFDSQCVSATSEHPAAI 382

Query: 1328 KRQFKDFVNQTLVLHGGLDIDKFSIYIDIGAISMSNVNSWIYFAVNHNVKEVDIAGYYGY 1149
            KR+    ++  L+L+ G  I+KF +    G IS + ++ WI+     ++KE+ +    G 
Sbjct: 383  KRKLLAIIDHVLLLYYG-PINKFKLS-PFGLISATALDRWIFHLTRRSIKELVLGLSIGQ 440

Query: 1148 FEKLPCCLFTCGTLRMLTLEYVNLQLPTMV-GLPKLKSLKIKFVRFFDENSTAQLFSSCP 972
              K+P CLF+C +L  LTL    L+ P+M+ GL  LKSL +  V    +++   L SSCP
Sbjct: 441  SYKIPWCLFSCQSLHYLTLFSCLLKPPSMIEGLKNLKSLYLVKVT-ISQDAFESLISSCP 499

Query: 971  LLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPPVKISTSNLCNIRYYGNPPEI 792
            LLE+L+++     + +    + I +P+L  + ++  +     IS  N   + Y      +
Sbjct: 500  LLEKLMLA-----EFDGFTQINIHAPNLNGLGIVGKF---EDISFENTYLLNYVIVDLSL 551

Query: 791  CLETLSSLSNVDFEFTSRLRIYYTRASAILMGLQNVVRMVLRGCFIELLSRNEGSSARLP 612
            CL + S+ S +    ++ L  +          + ++ ++ +RG F + L+       +LP
Sbjct: 552  CLNSESNHSRLQGSSSNLLNFF--------AHIHHIYKLDIRGYFFKYLAAGV-VPVKLP 602

Query: 611  TSCFSLEYLQLDVK-PSKEQVQVVILLLRNYPNLKHLRISV 492
            T C +L YL L +     +++   + + R+ PNLK L I V
Sbjct: 603  TPCINLTYLWLSINFYDLKEISTALCVFRSSPNLKELNIFV 643



 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 91/340 (26%), Positives = 155/340 (45%), Gaps = 7/340 (2%)
 Frame = -2

Query: 1496 DMISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTNIEFDQ----VKFERWARG 1329
            D IS LP  ++ RI+  LP+ D ++T+ L  KW    T++ N+ FD+        R    
Sbjct: 7    DRISCLPGDVIDRILLRLPIRDVVRTSVLCNKWRYKWTTIPNLVFDKQCVSATSHRPLVI 66

Query: 1328 KRQFKDFVNQTLVLHGGLDIDKFSIYIDIGAISMSNVNSWIYFAVNHNVKEVDIAGYYGY 1149
            +R+    ++  L+L+ G  I+KF                        ++K++ I    G 
Sbjct: 67   ERKLLAIIDHVLLLYSG-PINKF----------------------KRSIKKLVIEISKGQ 103

Query: 1148 FEKLPCCLFTCGTLRMLTLEYVNLQLP-TMVGLPKLKSLKIKFVRFFDENSTAQLFSSCP 972
              K+P CLF+C +L  L+L Y  L+ P T+VG   LKSL++       +++   L   CP
Sbjct: 104  PYKIPWCLFSCQSLLHLSLSYGLLKPPSTIVGFKNLKSLELDHFT-MSQDAFENLLFGCP 162

Query: 971  LLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPPVKISTSNLCNIRYYGNPPEI 792
            LLE+L+     F +      + I++P+LKS+ +   +     IS  N   +        +
Sbjct: 163  LLEKLI-----FDEFEGFTKININAPNLKSLGISGKF---EDISFINTFKLTCVAVDLSL 214

Query: 791  CLETLSSLSNVDFEFTSRLRIYYTRASAILMGLQ-NVVRMVLRGCFIELLSRNEGSSARL 615
             L + SS + +DF FT    +Y    S      + +VV   L    + L         +L
Sbjct: 215  YLNSESSSNLLDF-FTQLHHVYELYVSGYFSKSKFSVVHQYLAAGVVPL---------KL 264

Query: 614  PTSCFSLEYLQLDVKPSK-EQVQVVILLLRNYPNLKHLRI 498
            PT C +L  L L +  ++ +++   + + R+ PNLK L+I
Sbjct: 265  PTPCINLMSLWLSINFNELKEISTALSVFRSSPNLKELKI 304


>ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478059|gb|AES59262.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 528

 Score =  122 bits (305), Expect = 3e-25
 Identities = 114/428 (26%), Positives = 201/428 (46%), Gaps = 14/428 (3%)
 Frame = -2

Query: 1535 SRMKGNCSAQQTKDMISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTNIEFD- 1359
            +R +   +     D IS LP  ++ +I+S LP+ DA++T+ LS+ W     +L N+ FD 
Sbjct: 2    ARKRTKSTLDAEPDRISWLPGHVIDQIMSYLPIRDAVRTSVLSRNWRKKWYTLPNLVFDT 61

Query: 1358 -------QVKFERWARGKRQFKDFVNQTLVLHGG-LDIDKFSIYIDI-GAISM-SNVNSW 1209
                       +  A    +F   V+  L++H G +++ KFS   D+ G  S+ +N++ W
Sbjct: 62   KLVPVPAATSGDPLAIIDNKFLQIVDHVLLVHSGPINMFKFSNVDDLMGEDSLVTNIDRW 121

Query: 1208 IYFAVNHNVKEVDIAGYYGYFEKLPCCLFTCGTLRMLTLEYVNLQLPTMV-GLPKLKSLK 1032
            I   +  ++KE+ +  +   + KLP CLF+C +L  L L    L+ PTM  G   LKSL 
Sbjct: 122  ILHLIGRSIKELVLEVWIDDYYKLPWCLFSCQSLHSLKLNGCLLKPPTMFEGFRNLKSLD 181

Query: 1031 IKFVRFFDENSTAQLFSSCPLLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPP 852
            +  V    +++     S CPLLE+L +     ++      + I +P+LK   ++  +   
Sbjct: 182  LCLVNIV-QDAFENFISRCPLLEKLRL-----REFYGLTQINIHAPNLKFFEIVGEFEVV 235

Query: 851  VKISTSNLCNIRYYGNPPEICLETLSSLSNVDFEFTSRLRIYYTRASAILMGLQNVVRMV 672
               +T  L  I  Y      CLE L+S SN      SR     +          ++  + 
Sbjct: 236  TFGNTFQLTTIVIYS-----CLE-LTSNSN-----QSRSPGCSSNLLKFFDHRPHIQSLE 284

Query: 671  LRGCFIELLSRNEGSSARLPTSCFSLEYLQLDVK-PSKEQVQVVILLLRNYPNLKHLRIS 495
            + G F++ L+       +LPT C +L +L L +   + E++   + + R+ PNL+ L+IS
Sbjct: 285  IDGFFLKYLAAGV-LPVKLPTPCINLSFLSLTINFDNMEEISAALCVFRSSPNLQKLKIS 343

Query: 494  VKEPTRRLNLHELWXXXXXXXXXXXXGSSMDILD-HLKTVDVESFGGSKIELDLVRYLLK 318
                   L  H                SS  ++   ++ V ++   G++ EL+L+R+LL 
Sbjct: 344  A------LRAHVATVPLTPATYCWEDISSRLVMPFRVRHVTIDGISGTQSELNLIRFLLL 397

Query: 317  NANILEKL 294
             + +LEK+
Sbjct: 398  YSLVLEKM 405


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  120 bits (302), Expect = 8e-25
 Identities = 104/347 (29%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
 Frame = -2

Query: 1529 MKGNCSAQQTKDM-------ISNLPEPILSRIVSLLPLEDAIKTTSLSKKWLNVCTSLTN 1371
            ++G   A Q +DM       I++LP+ +L  I+S L  +DA++T+ LS+KW ++  SL+N
Sbjct: 20   VEGGGVADQKQDMDDSGGKSINDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSN 79

Query: 1370 IEFDQVKFERWARGKRQ-FKDFVNQTLVLHGGLDIDKFSIYIDIGAISMSNVNSWIYFAV 1194
            +EF Q  F    + KR+ F + V + L+L    +I+KF+  +  G    +   +W+  AV
Sbjct: 80   LEFHQCYF----KAKRKIFMNSVERVLLLRDSSNIEKFT--LSCGIDDATRTRTWVSAAV 133

Query: 1193 NHNVKEVDIAGYYGYFEK---LPCCLFTCGTLRMLTL-EYVNLQLPTMVGLPKLKSLKIK 1026
            N NVKE+ +  Y G   +    P CLFTC TL  L +  +  L+L + + LP LK L ++
Sbjct: 134  NRNVKELCVNFYEGGESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQ 193

Query: 1025 FVRFFDENSTAQLFSSCPLLEELVISNCCFKDMNVSCIVEISSPSLKSVTVLSFYLPPVK 846
             V F DE+ST Q+  +   LE+L IS   +K++     + IS+P L+S+ +   +   ++
Sbjct: 194  HVVFPDEDSTQQIL-NLRTLEKLKISYYDWKNLKA---ITISAPKLRSLDICEMHRNDLR 249

Query: 845  ISTSNLCNIRYYGNP-----------PEICLETLSSLSNVDFEF---TSRLRIYYTRASA 708
               S+ C++  +G              + CL   SSL    F       R R    RA  
Sbjct: 250  --GSDACHVMIFGTALTFFSFSGGFWDDYCLFKSSSLVEAYFHVYGCYERSREIAHRAYK 307

Query: 707  ILMGLQNVVRMVLRGCFIELLSRNEGSSARLPTSCFSLEYLQLDVKP 567
             ++GL  V  + L    +++       S  LPT+C   +++   V P
Sbjct: 308  HIVGLSTVKHLTLTPDVLKI-----ELSEELPTNCAKDDWILEPVPP 349