BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011471
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29
ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein lig...   130   9e-29
ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein lig...   128   4e-28
ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein lig...   128   6e-28
ref|NP_680156.2| regulator of chromosome condensation repeat-con...   124   8e-27

>ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|222856514|gb|EEE94061.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/93 (68%), Positives = 71/93 (76%), Gaps = 6/93 (6%)
 Frame = +1

Query: 109 RWMSTSG----KRVAALWGNGDYGRLGLGKLDSSWAPSIC--TSLENQNVQSISCGGAHT 270
           RWMS+S     KR AA+WGNGDYGRLG G LDS W P +   +S  N N++SISCGGAHT
Sbjct: 18  RWMSSSSSEGRKRSAAVWGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHT 77

Query: 271 LFLTEAGRVYATGLNDFGQLGTSNETRYTLEPL 369
           LFLTE GRVYATGLNDFGQLG SN T Y +EPL
Sbjct: 78  LFLTETGRVYATGLNDFGQLGVSNNTTYCMEPL 110


>ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  130 bits (328), Expect = 9e-29
 Identities = 61/106 (57%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
 Frame = +1

Query: 55  HSKMWTRKVRNLGFKSSSRWM-STSGKRVAALWGNGDYGRLGLGKLDSSWAPSICTSLEN 231
           +S+ W RK+        +RW  S SGKR  A+WGNGD+GRLGLG LDS W+P  C+S + 
Sbjct: 78  NSETWKRKI--------TRWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDR 129

Query: 232 QNVQSISCGGAHTLFLTEAGRVYATGLNDFGQLGTSNETRYTLEPL 369
           + ++ I+CGGAHTLFLTE+GRVYATGLN+FGQLG S+E R++ EP+
Sbjct: 130 EMLKGIACGGAHTLFLTESGRVYATGLNNFGQLGISDEKRFSTEPV 175


>ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Cucumis sativus]
          Length = 386

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/92 (63%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
 Frame = +1

Query: 97  KSSSRWM-STSGKRVAALWGNGDYGRLGLGKLDSSWAPSICTSLENQNVQSISCGGAHTL 273
           K  +RW  S SGKR  A+WGNGD+GRLGLG LDS W+P  C+S + + ++ I+CGGAHTL
Sbjct: 67  KKITRWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTL 126

Query: 274 FLTEAGRVYATGLNDFGQLGTSNETRYTLEPL 369
           FLTE+GRVYATGLN+FGQLG S+E R++ EP+
Sbjct: 127 FLTESGRVYATGLNNFGQLGISDEKRFSTEPV 158


>ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 417

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/94 (63%), Positives = 71/94 (75%)
 Frame = +1

Query: 88  LGFKSSSRWMSTSGKRVAALWGNGDYGRLGLGKLDSSWAPSICTSLENQNVQSISCGGAH 267
           LGF + S +   +GKR AALWGNGDYGRLGLG LDS W P +C +  N+ + +I+CGGAH
Sbjct: 18  LGFPTRS-FSRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAH 76

Query: 268 TLFLTEAGRVYATGLNDFGQLGTSNETRYTLEPL 369
           TLFLTE G VYATGLNDFGQLG S    Y++EPL
Sbjct: 77  TLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPL 110


>ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana] gi|26452773|dbj|BAC43467.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973187|gb|AAO63918.1| putative UVB-resistance
           protein UVR8 [Arabidopsis thaliana]
           gi|332003957|gb|AED91340.1| regulator of chromosome
           condensation repeat-containing protein [Arabidopsis
           thaliana]
          Length = 434

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/89 (60%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
 Frame = +1

Query: 106 SRWMST-SGKRVAALWGNGDYGRLGLGKLDSSWAPSICTSLENQNVQSISCGGAHTLFLT 282
           SRW+S+ SGKR AA+WG+GDYGRLGLG LDS W P++C++L + ++ +++CGGAHTLFLT
Sbjct: 39  SRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLT 98

Query: 283 EAGRVYATGLNDFGQLGTSNETRYTLEPL 369
           E  RV+ATGLND GQLG S+   + ++PL
Sbjct: 99  ETRRVFATGLNDCGQLGVSDVKSHAMDPL 127