BLASTX nr result

ID: Coptis25_contig00011461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011461
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633739.1| PREDICTED: valyl-tRNA synthetase-like [Vitis...   338   5e-91
emb|CBI33504.3| unnamed protein product [Vitis vinifera]              338   5e-91
ref|XP_002270806.2| PREDICTED: valyl-tRNA synthetase-like [Vitis...   335   4e-90
emb|CBI29095.3| unnamed protein product [Vitis vinifera]              335   4e-90
ref|XP_004166190.1| PREDICTED: valine--tRNA ligase-like [Cucumis...   335   5e-90

>ref|XP_003633739.1| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 958

 Score =  338 bits (868), Expect = 5e-91
 Identities = 161/211 (76%), Positives = 182/211 (86%), Gaps = 1/211 (0%)
 Frame = -3

Query: 632 YRLNPLLFS-RHIRGINFSLLKFNSFNHKSLSISAASSNDGVFTSPETAKIFDFTNEERI 456
           YRLNPLLFS R +R      ++ +  + K    + A+  + VFTSPETAK FDFT+EERI
Sbjct: 15  YRLNPLLFSHRRLR------IRLSHSHLKPRFFAVAARENDVFTSPETAKPFDFTSEERI 68

Query: 455 YNWWESQGYFKPNIDQGGDPFVVSMPPPNVTGALHMGHAMFVTLEDIMVRYHRMKGRTTL 276
           YNWW+SQGYFKPN+D+G DPFV+SMPPPNVTG+LHMGHAMFVTLEDIMVRYHRMKGR TL
Sbjct: 69  YNWWDSQGYFKPNLDRGSDPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYHRMKGRPTL 128

Query: 275 WVPGTDHAGIATQLVVERMLASEGIKRVEIGRDEFTRRVWEWKAKYGGAITKQIKRLGAS 96
           W+PGTDHAGIATQLVVERMLASEGIKR E+ RDEFT+RVWEWK KYGG IT QIKRLGAS
Sbjct: 129 WIPGTDHAGIATQLVVERMLASEGIKRAELSRDEFTKRVWEWKEKYGGTITNQIKRLGAS 188

Query: 95  CDWSREHFTLDEHLSRAVVEAFIRLHEKGLI 3
           CDW+REHFTLDE LSRAV+EAF+RLHE+GLI
Sbjct: 189 CDWTREHFTLDEQLSRAVIEAFVRLHERGLI 219


>emb|CBI33504.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  338 bits (868), Expect = 5e-91
 Identities = 161/211 (76%), Positives = 182/211 (86%), Gaps = 1/211 (0%)
 Frame = -3

Query: 632 YRLNPLLFS-RHIRGINFSLLKFNSFNHKSLSISAASSNDGVFTSPETAKIFDFTNEERI 456
           YRLNPLLFS R +R      ++ +  + K    + A+  + VFTSPETAK FDFT+EERI
Sbjct: 15  YRLNPLLFSHRRLR------IRLSHSHLKPRFFAVAARENDVFTSPETAKPFDFTSEERI 68

Query: 455 YNWWESQGYFKPNIDQGGDPFVVSMPPPNVTGALHMGHAMFVTLEDIMVRYHRMKGRTTL 276
           YNWW+SQGYFKPN+D+G DPFV+SMPPPNVTG+LHMGHAMFVTLEDIMVRYHRMKGR TL
Sbjct: 69  YNWWDSQGYFKPNLDRGSDPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYHRMKGRPTL 128

Query: 275 WVPGTDHAGIATQLVVERMLASEGIKRVEIGRDEFTRRVWEWKAKYGGAITKQIKRLGAS 96
           W+PGTDHAGIATQLVVERMLASEGIKR E+ RDEFT+RVWEWK KYGG IT QIKRLGAS
Sbjct: 129 WIPGTDHAGIATQLVVERMLASEGIKRAELSRDEFTKRVWEWKEKYGGTITNQIKRLGAS 188

Query: 95  CDWSREHFTLDEHLSRAVVEAFIRLHEKGLI 3
           CDW+REHFTLDE LSRAV+EAF+RLHE+GLI
Sbjct: 189 CDWTREHFTLDEQLSRAVIEAFVRLHERGLI 219


>ref|XP_002270806.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 959

 Score =  335 bits (860), Expect = 4e-90
 Identities = 163/210 (77%), Positives = 177/210 (84%)
 Frame = -3

Query: 632 YRLNPLLFSRHIRGINFSLLKFNSFNHKSLSISAASSNDGVFTSPETAKIFDFTNEERIY 453
           YRLNPLLFS     I  S    +S         AA  ND VFTSPETAK FDFT+EERIY
Sbjct: 15  YRLNPLLFSHRCLRIRLS----HSHLKPRFFAVAAREND-VFTSPETAKSFDFTSEERIY 69

Query: 452 NWWESQGYFKPNIDQGGDPFVVSMPPPNVTGALHMGHAMFVTLEDIMVRYHRMKGRTTLW 273
           NWW+SQGYFKPN+D+G DPFV+SMPPPNVTG+LHMGHAMFVTLEDIMVRYHRMKGR TLW
Sbjct: 70  NWWDSQGYFKPNLDRGSDPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYHRMKGRPTLW 129

Query: 272 VPGTDHAGIATQLVVERMLASEGIKRVEIGRDEFTRRVWEWKAKYGGAITKQIKRLGASC 93
           +PGTDHAGIATQLVVERMLASEGIKR E+ RDEFT+RVWEWK KYGG IT QIKRLGASC
Sbjct: 130 IPGTDHAGIATQLVVERMLASEGIKRAELSRDEFTKRVWEWKEKYGGTITNQIKRLGASC 189

Query: 92  DWSREHFTLDEHLSRAVVEAFIRLHEKGLI 3
           DW+REHFTLDE LS AV+EAF+RLHE+GLI
Sbjct: 190 DWTREHFTLDEKLSWAVIEAFVRLHERGLI 219


>emb|CBI29095.3| unnamed protein product [Vitis vinifera]
          Length = 963

 Score =  335 bits (860), Expect = 4e-90
 Identities = 163/210 (77%), Positives = 177/210 (84%)
 Frame = -3

Query: 632 YRLNPLLFSRHIRGINFSLLKFNSFNHKSLSISAASSNDGVFTSPETAKIFDFTNEERIY 453
           YRLNPLLFS     I  S    +S         AA  ND VFTSPETAK FDFT+EERIY
Sbjct: 15  YRLNPLLFSHRCLRIRLS----HSHLKPRFFAVAAREND-VFTSPETAKSFDFTSEERIY 69

Query: 452 NWWESQGYFKPNIDQGGDPFVVSMPPPNVTGALHMGHAMFVTLEDIMVRYHRMKGRTTLW 273
           NWW+SQGYFKPN+D+G DPFV+SMPPPNVTG+LHMGHAMFVTLEDIMVRYHRMKGR TLW
Sbjct: 70  NWWDSQGYFKPNLDRGSDPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYHRMKGRPTLW 129

Query: 272 VPGTDHAGIATQLVVERMLASEGIKRVEIGRDEFTRRVWEWKAKYGGAITKQIKRLGASC 93
           +PGTDHAGIATQLVVERMLASEGIKR E+ RDEFT+RVWEWK KYGG IT QIKRLGASC
Sbjct: 130 IPGTDHAGIATQLVVERMLASEGIKRAELSRDEFTKRVWEWKEKYGGTITNQIKRLGASC 189

Query: 92  DWSREHFTLDEHLSRAVVEAFIRLHEKGLI 3
           DW+REHFTLDE LS AV+EAF+RLHE+GLI
Sbjct: 190 DWTREHFTLDEKLSWAVIEAFVRLHERGLI 219


>ref|XP_004166190.1| PREDICTED: valine--tRNA ligase-like [Cucumis sativus]
          Length = 299

 Score =  335 bits (859), Expect = 5e-90
 Identities = 156/209 (74%), Positives = 182/209 (87%)
 Frame = -3

Query: 629 RLNPLLFSRHIRGINFSLLKFNSFNHKSLSISAASSNDGVFTSPETAKIFDFTNEERIYN 450
           RLNPLLF++H R    S  +F   + + L+++A+++  GVFTSPE AK FDF +EERIY 
Sbjct: 16  RLNPLLFTKHRRSFGLSRFRFRRLHQRQLAVAASAN--GVFTSPEIAKTFDFASEERIYK 73

Query: 449 WWESQGYFKPNIDQGGDPFVVSMPPPNVTGALHMGHAMFVTLEDIMVRYHRMKGRTTLWV 270
           WWESQGYF+P+ DQ   PFV+SMPPPNVTG+LHMGHAMFVTLEDIMVRY+RMKGR TLW+
Sbjct: 74  WWESQGYFRPHHDQDTVPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMKGRPTLWL 133

Query: 269 PGTDHAGIATQLVVERMLASEGIKRVEIGRDEFTRRVWEWKAKYGGAITKQIKRLGASCD 90
           PGTDHAGIATQLVVERMLASEGIKRVE+GRDEFT+RVWEWK KYGG IT QIKRLGASCD
Sbjct: 134 PGTDHAGIATQLVVERMLASEGIKRVELGRDEFTKRVWEWKEKYGGTITNQIKRLGASCD 193

Query: 89  WSREHFTLDEHLSRAVVEAFIRLHEKGLI 3
           W++EHFTLD+ LSRAV+EAF+RLHE+GLI
Sbjct: 194 WTKEHFTLDDQLSRAVIEAFVRLHERGLI 222


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