BLASTX nr result

ID: Coptis25_contig00011435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011435
         (1415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270713.1| PREDICTED: uncharacterized protein At3g17611...   376   e-102
ref|XP_002519350.1| conserved hypothetical protein [Ricinus comm...   353   6e-95
ref|XP_002314342.1| predicted protein [Populus trichocarpa] gi|2...   351   3e-94
ref|NP_001240224.1| uncharacterized protein LOC100816495 [Glycin...   344   4e-92
ref|NP_850606.1| rhomboid-like protein 14 [Arabidopsis thaliana]...   341   3e-91

>ref|XP_002270713.1| PREDICTED: uncharacterized protein At3g17611 [Vitis vinifera]
            gi|147864086|emb|CAN81122.1| hypothetical protein
            VITISV_038478 [Vitis vinifera]
            gi|297736839|emb|CBI26040.3| unnamed protein product
            [Vitis vinifera]
          Length = 328

 Score =  376 bits (966), Expect = e-102
 Identities = 197/324 (60%), Positives = 240/324 (74%), Gaps = 3/324 (0%)
 Frame = -1

Query: 1277 RRGTRGMLPLLAVHTIHEYYRSERKPPVTAGLLLANTLIYLRPGVLDTLLPTLNEVWFNP 1098
            RR +RGMLPLLA+HT +EYYR   KPPVTAGLL ANTLIYLRP  +D++LPT+++VWFNP
Sbjct: 6    RRVSRGMLPLLALHTANEYYRVGWKPPVTAGLLAANTLIYLRPSFIDSMLPTIDKVWFNP 65

Query: 1097 HLILKHQDLKRFFLSPFYHMGESHLVYNMMSLLWKGIQLETAMGSVEFASMVAALLGLSQ 918
            HLILKH+DLKRF LSPFYHM E+HLVYNMMSLLWKGIQLET+MGS EFASMVA LLG+SQ
Sbjct: 66   HLILKHKDLKRFLLSPFYHMDEAHLVYNMMSLLWKGIQLETSMGSAEFASMVATLLGMSQ 125

Query: 917  GITLFLAKG-LLFFDYKRAFYYEHAVGFSGVLFALKVVLNSQEDENSYVHGLIVPARYAV 741
            GITL LAK  LLFFDY+RA+Y + AVGFSGVLFA+KVVLNSQ  + +YVHGLIVP R+A 
Sbjct: 126  GITLLLAKSLLLFFDYERAYYSQFAVGFSGVLFAMKVVLNSQSADYTYVHGLIVPTRHAA 185

Query: 740  WAELVLIQLMVPGVSFXXXXXXXXXXXXXXXLKGSYPGSDPVVTLLRGVSGVLRRSVNFV 561
            W EL+LIQ+ VPGVSF               LKG+Y GSDP+  L +G++  L   + F 
Sbjct: 186  WVELILIQMFVPGVSFLGHLGGILAGILYLRLKGTYSGSDPLTILFKGLADALSWPLRFA 245

Query: 560  RDLFXXXXXXXXXXXXXGNRVGRSSGVWQCWACTFVNSEELSTCEMCSSERD-HGLSSAR 384
            + LF             G +  R+SGVW+CW+CT+ N   LS CEMC + R+ +GLSS+ 
Sbjct: 246  QGLF-RRRRISGRGTVGGRQTRRTSGVWRCWSCTYDNPGGLSICEMCGTARNGNGLSSSL 304

Query: 383  PSNRTSNP-SLEELRQRRIDRFTR 315
               R S+   L+ELR+RR++RF R
Sbjct: 305  QWPRQSHELPLDELRRRRLERFGR 328


>ref|XP_002519350.1| conserved hypothetical protein [Ricinus communis]
            gi|223541665|gb|EEF43214.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 325

 Score =  353 bits (906), Expect = 6e-95
 Identities = 193/330 (58%), Positives = 232/330 (70%), Gaps = 3/330 (0%)
 Frame = -1

Query: 1295 MNRGDGRRGTRGMLPLLAVHTIHEYYRSERKPPVTAGLLLANTLIYLRPGVLDTLLPTLN 1116
            M R  GR   RGMLPLLA+H + EYYR   KPPVTAGLL ANTLIYLRP  L  +LP+++
Sbjct: 1    MERSGGRL-PRGMLPLLAIHAVSEYYRLPWKPPVTAGLLAANTLIYLRPAFLRPILPSIH 59

Query: 1115 EVWFNPHLILKHQDLKRFFLSPFYHMGESHLVYNMMSLLWKGIQLETAMGSVEFASMVAA 936
            +VWFNP+LILK  DLKRFFLS FYH+GESHLVYNMMSLLWKGIQLET+MGSVEFASMVAA
Sbjct: 60   DVWFNPYLILKDGDLKRFFLSAFYHVGESHLVYNMMSLLWKGIQLETSMGSVEFASMVAA 119

Query: 935  LLGLSQGITLFLAKG-LLFFDYKRAFYYEHAVGFSGVLFALKVVLNSQEDENSYVHGLIV 759
            LL +SQGITL LAK  LLFFDY R FY E+AVGFSGVLFA+KVVLNSQ D  ++VHGL+V
Sbjct: 120  LLTMSQGITLLLAKSLLLFFDYGRPFYSEYAVGFSGVLFAMKVVLNSQSDNYTHVHGLVV 179

Query: 758  PARYAVWAELVLIQLMVPGVSFXXXXXXXXXXXXXXXLKGSYPGSDPVVTLLRGVSGVLR 579
            PAR+A WAEL+LIQ+ VPGVSF               LKG Y GSDP+  +++ ++ +L 
Sbjct: 180  PARHAAWAELILIQMFVPGVSFLGHLGGILAGILYLKLKGIYSGSDPLTLIIKNLTSILS 239

Query: 578  RSVNFVRDLF-XXXXXXXXXXXXXGNRVGRS-SGVWQCWACTFVNSEELSTCEMCSSERD 405
              +  V+ LF              G++ GR+   VW+C ACT+ N    S CEMC     
Sbjct: 240  WPLRLVKGLFGPRQQQISGRGTVGGSQAGRAVLRVWRCQACTYDNYSSSSVCEMCG---- 295

Query: 404  HGLSSARPSNRTSNPSLEELRQRRIDRFTR 315
            + L S R   +  + SLEE+R+RRI+RF R
Sbjct: 296  NSLPSYRLPRQFDDLSLEEIRRRRIERFGR 325


>ref|XP_002314342.1| predicted protein [Populus trichocarpa] gi|222863382|gb|EEF00513.1|
            predicted protein [Populus trichocarpa]
          Length = 328

 Score =  351 bits (900), Expect = 3e-94
 Identities = 187/325 (57%), Positives = 234/325 (72%), Gaps = 6/325 (1%)
 Frame = -1

Query: 1277 RRG--TRGMLPLLAVHTIHEYYRSERKPPVTAGLLLANTLIYLRPGVLDTLLPTLNEVWF 1104
            RRG  T+GMLPLLA+H + EYYR   KPPVTA LL ANTLIYLRP  L  +LP++++VWF
Sbjct: 3    RRGSLTKGMLPLLAIHAVSEYYRLPWKPPVTAALLGANTLIYLRPAFLRHILPSIDQVWF 62

Query: 1103 NPHLILKHQDLKRFFLSPFYHMGESHLVYNMMSLLWKGIQLETAMGSVEFASMVAALLGL 924
            NPHLILK++DLKRF LSPFYH+ +SHLVYNMMSLLWKGIQLET++GSVEFASM+AALL +
Sbjct: 63   NPHLILKYRDLKRFLLSPFYHVSDSHLVYNMMSLLWKGIQLETSVGSVEFASMLAALLAM 122

Query: 923  SQGITLFLAKG-LLFFDYKRAFYYEHAVGFSGVLFALKVVLNSQEDENSYVHGLIVPARY 747
            SQGITL LA+  LLFFDY + FY E++ GFSGVLFA+KVVLNSQ +  + V+GL++PAR+
Sbjct: 123  SQGITLLLARSLLLFFDYDKPFYSEYSAGFSGVLFAMKVVLNSQSESLTNVYGLVIPARH 182

Query: 746  AVWAELVLIQLMVPGVSFXXXXXXXXXXXXXXXLKGSYPGSDPVVTLLRGVSGVLRRSVN 567
            A WAEL+LIQ+ VPGVSF               LK +Y G DP+   +R ++ V+   + 
Sbjct: 183  AAWAELILIQMFVPGVSFLGHLGGILAGILYVKLKRAYSGPDPLTLTIRTLTNVISWPLR 242

Query: 566  FVRDLFXXXXXXXXXXXXXGNR-VGRS-SGVWQCWACTFVNSEELSTCEMCSSERD-HGL 396
            FVR+LF             G R  GR+ SG+W+C ACT+ NS  LS CEMC + R   GL
Sbjct: 243  FVRNLFQFRRGRISGRGSVGGRQTGRAMSGLWRCQACTYDNSSLLSVCEMCGTSRGARGL 302

Query: 395  SSARPSNRTSNPSLEELRQRRIDRF 321
            SS   S  + + +LEE+R RRI+RF
Sbjct: 303  SSREFSRHSDDLTLEEIRLRRIERF 327


>ref|NP_001240224.1| uncharacterized protein LOC100816495 [Glycine max]
            gi|255640981|gb|ACU20770.1| unknown [Glycine max]
          Length = 322

 Score =  344 bits (882), Expect = 4e-92
 Identities = 180/323 (55%), Positives = 232/323 (71%), Gaps = 3/323 (0%)
 Frame = -1

Query: 1280 GRRGTRGMLPLLAVHTIHEYYRSERKPPVTAGLLLANTLIYLRPGVLDTLLPTLNEVWFN 1101
            G+R +RGMLPLLA+HT+ EYYRS+ KPP TA L+ ANTLIYLRP  LD L+P + +VWFN
Sbjct: 6    GQRVSRGMLPLLALHTVSEYYRSDHKPPFTAALIAANTLIYLRPSFLDPLIPPIEQVWFN 65

Query: 1100 PHLILKHQDLKRFFLSPFYHMGESHLVYNMMSLLWKGIQLETAMGSVEFASMVAALLGLS 921
            PHLILK++DLKRF LSPFYH+GE HLVYNM+SLLWKG QLET+MGSV+FAS+VA+LL LS
Sbjct: 66   PHLILKNKDLKRFLLSPFYHIGEPHLVYNMLSLLWKGFQLETSMGSVDFASIVASLLVLS 125

Query: 920  QGITLFLAKG-LLFFDYKRAFYYEHAVGFSGVLFALKVVLNSQEDENSYVHGLIVPARYA 744
            QG+TL L+K  LLFFDY+R++Y E++VGFSGVLFA+KVVLNSQ +  + V+G+IVP+RYA
Sbjct: 126  QGVTLMLSKSLLLFFDYERSYYSEYSVGFSGVLFAMKVVLNSQSENYTSVYGIIVPSRYA 185

Query: 743  VWAELVLIQLMVPGVSFXXXXXXXXXXXXXXXLKGSYPGSDPVVTLLRGVSGVLRRSVNF 564
             WAELVL QL+VPGVSF               L+ +Y GS+P+  L+RG+   ++    F
Sbjct: 186  AWAELVLAQLLVPGVSFLGHLGGILAGLLYLKLRSTYSGSNPIKVLIRGIVDAVKWPFKF 245

Query: 563  VRDLFXXXXXXXXXXXXXGNRVGRSSGVWQCWACTFVNSE-ELSTCEMCSSER-DHGLSS 390
            +R                   VG S+  W+C  CT+ N+   L  CEMC + R  +G+SS
Sbjct: 246  LR--------RRRGRITGRGTVG-SNRAWRCQTCTYDNNNGSLRVCEMCGTIRVVNGVSS 296

Query: 389  ARPSNRTSNPSLEELRQRRIDRF 321
             + S+R+    L+ELR+RRIDRF
Sbjct: 297  FQRSSRSDGLPLDELRRRRIDRF 319


>ref|NP_850606.1| rhomboid-like protein 14 [Arabidopsis thaliana]
            gi|75247670|sp|Q8RXW0.1|Y3761_ARATH RecName:
            Full=Uncharacterized protein At3g17611
            gi|19310562|gb|AAL85014.1| unknown protein [Arabidopsis
            thaliana] gi|21436261|gb|AAM51269.1| unknown protein
            [Arabidopsis thaliana] gi|332642458|gb|AEE75979.1|
            rhomboid-like protein 14 [Arabidopsis thaliana]
          Length = 334

 Score =  341 bits (874), Expect = 3e-91
 Identities = 179/336 (53%), Positives = 227/336 (67%), Gaps = 11/336 (3%)
 Frame = -1

Query: 1292 NRGDGRRGTRGMLPLLAVHTIHEYYRSERKPPVTAGLLLANTLIYLRPGVLDTLLPTLNE 1113
            N G+GRR   GMLPLLA+  + EYYR   KPPVTA LL ANTL+YLRP  +D ++P ++E
Sbjct: 3    NFGEGRRSGGGMLPLLALSAVAEYYRLPWKPPVTASLLAANTLVYLRPAFIDPVIPHISE 62

Query: 1112 VWFNPHLILKHQDLKRFFLSPFYHMGESHLVYNMMSLLWKGIQLETAMGSVEFASMVAAL 933
            VWFNPHLI KH+DLKR FLS FYH+ E HLVYNMMSLLWKGI+LET+MGS EFASMV  L
Sbjct: 63   VWFNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFTL 122

Query: 932  LGLSQGITLFLAKG-LLFFDYKRAFYYEHAVGFSGVLFALKVVLNSQEDENSYVHGLIVP 756
            +G+SQG+TL LAK  LL FDY RA+Y E+AVGFSGVLFA+KVVLNSQ ++ S V+G++VP
Sbjct: 123  IGMSQGVTLLLAKSLLLLFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYSSVYGILVP 182

Query: 755  ARYAVWAELVLIQLMVPGVSFXXXXXXXXXXXXXXXLKGSYPGSDPVVTLLRGVSGVLRR 576
             +YA WAEL+L+Q+ VP  SF               LKGSY GSDPV   +RGVS ++  
Sbjct: 183  TKYAAWAELILVQMFVPNASFLGHLGGILAGIIYLKLKGSYSGSDPVTMAVRGVSRLVTW 242

Query: 575  SVNFVRDLFXXXXXXXXXXXXXGNRVGRSS------GVWQCWACTFVNSEELSTCEMCSS 414
             + F+  +                RVGR        G+W+C +CT+ NS  LS CEMC S
Sbjct: 243  PLRFLNGM----VRSRRRRITGRGRVGRGQTGIAGPGIWRCQSCTYDNSGWLSACEMCGS 298

Query: 413  ERDHG----LSSARPSNRTSNPSLEELRQRRIDRFT 318
             R  G    L+     + +++  L+ELR+RR++RF+
Sbjct: 299  GRARGNGWSLNQGPALSSSNDLPLDELRRRRVERFS 334


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