BLASTX nr result

ID: Coptis25_contig00011430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011430
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279873.1| PREDICTED: uncharacterized protein LOC100255...   285   3e-91
ref|XP_002309505.1| predicted protein [Populus trichocarpa] gi|2...   259   3e-83
ref|XP_002516450.1| conserved hypothetical protein [Ricinus comm...   246   4e-77
gb|AFO66525.1| putative Myo28B1 [Brassica napus]                      244   8e-77
ref|XP_004159543.1| PREDICTED: uncharacterized LOC101217985 [Cuc...   252   1e-76

>ref|XP_002279873.1| PREDICTED: uncharacterized protein LOC100255893 [Vitis vinifera]
            gi|296081666|emb|CBI20671.3| unnamed protein product
            [Vitis vinifera]
          Length = 320

 Score =  285 bits (729), Expect(2) = 3e-91
 Identities = 153/274 (55%), Positives = 197/274 (71%), Gaps = 9/274 (3%)
 Frame = -2

Query: 1041 ESDDERVVRELAQLLDAYDS---YNIRAAKQSSTSE-SLVQTISERFMGLRAAIFTNDSS 874
            E++DER+VRE AQLLD+ ++    N+  A      + SL+ TISERFMG+RAAI  N+SS
Sbjct: 48   ETEDERIVREFAQLLDSCEASLGVNVGGATNLECQQKSLMPTISERFMGMRAAIVANNSS 107

Query: 873  VRSFASLLGLTVLQFDELIMNNNSPREPAV----SGLLKLLGFQGCMALDTCEFDLVFVH 706
            + SF   LG TV+Q DELI NN+   EP V    S  LKLLGFQ    L+T +FDL+F+H
Sbjct: 108  LTSFGGTLGFTVMQTDELIKNNHPLSEPPVDVVASESLKLLGFQEGKTLETSQFDLIFMH 167

Query: 705  IKSGGRCSDLKVDIAGGEVEFINGLIGGILEVAQLGSEISTRLHISLVISYGTLAEDKDS 526
            I +G + +  + +I   +VE+INGL+G I++ A+ GSEI +RLH+SLV+SYG +++D D 
Sbjct: 168  IGAGEKANG-QTEIIANDVEYINGLVGRIMQTAEPGSEIGSRLHLSLVMSYGAVSKDDDP 226

Query: 525  VLN-LSLQEKANPDLSLLFPRQSYITTGKNSADSIRHHCPMLISQWQEAVTRKDTTEIFT 349
             L+ L  + + N DLS L PRQSY   G N  D+IRHHCPMLI+QWQ AVTRKD  + F+
Sbjct: 227  SLSVLVTKNENNSDLSSLSPRQSYTMKGGNPRDNIRHHCPMLIAQWQYAVTRKDMAKTFS 286

Query: 348  FKEFKEHGANLAIPADRFLHEVAFKLWKAPKYGA 247
            F++FKEHG NL IPADRFLHEVAFKLWKAPKYGA
Sbjct: 287  FEDFKEHGGNLTIPADRFLHEVAFKLWKAPKYGA 320



 Score = 78.2 bits (191), Expect(2) = 3e-91
 Identities = 36/47 (76%), Positives = 39/47 (82%)
 Frame = -3

Query: 1253 MADKASRGLVIYGDGLMPLISPSHTHLHQLASRGTCGFLCLPHSPPS 1113
            MADK SRGLV+YGDGL   I+PSHTHLH LASRG CGFL L +SPPS
Sbjct: 1    MADKPSRGLVLYGDGLARFINPSHTHLHDLASRGICGFLSLSNSPPS 47


>ref|XP_002309505.1| predicted protein [Populus trichocarpa] gi|222855481|gb|EEE93028.1|
            predicted protein [Populus trichocarpa]
          Length = 309

 Score =  259 bits (662), Expect(2) = 3e-83
 Identities = 144/270 (53%), Positives = 185/270 (68%), Gaps = 5/270 (1%)
 Frame = -2

Query: 1041 ESDDERVVRELAQLLDAYDSYNIRAAKQSSTSESLVQTISERFMGLRAAIFTNDSSVRSF 862
            ES+DER+VRE A LLDA ++Y     +  STS   + TISERFMG++AAI TN+  ++SF
Sbjct: 48   ESEDERIVREFAYLLDACEAY-----QNVSTS---IPTISERFMGMKAAIITNNPGLKSF 99

Query: 861  ASLLGLTVLQFDELIMN----NNSPREPAVSGLLKLLGFQGCMALDTCEFDLVFVHIKSG 694
               LGLTV  F++L  N    + S  +     LLKLLGFQ    L+T +FDLVFVH+ +G
Sbjct: 100  GGKLGLTVFPFNDLKGNEFSLSGSSTDFVTFELLKLLGFQEGKTLETSQFDLVFVHVGAG 159

Query: 693  GRCSDLKVDIAGGEVEFINGLIGGILEVAQLGSEISTRLHISLVISYGTLAEDKDSVLN- 517
             R +         +VE+I+ L+ GI+ +AQ GSEI +RLH+SLV+SYG + E     L+ 
Sbjct: 160  ERVNAEGHKTIAIDVEYIDALVDGIMRIAQPGSEIGSRLHLSLVMSYGYVTEGDGRDLSI 219

Query: 516  LSLQEKANPDLSLLFPRQSYITTGKNSADSIRHHCPMLISQWQEAVTRKDTTEIFTFKEF 337
            L+ +++ +P LS LFP QSY   G+   + IR+HCPMLISQWQ AVTR D  E F+FK+F
Sbjct: 220  LTSKDEMDPALSKLFPLQSYTMKGEKPRNDIRYHCPMLISQWQYAVTRVDMAETFSFKDF 279

Query: 336  KEHGANLAIPADRFLHEVAFKLWKAPKYGA 247
            KEHG NL IPADRFLHEVAFKLWKAPKYGA
Sbjct: 280  KEHGGNLVIPADRFLHEVAFKLWKAPKYGA 309



 Score = 77.4 bits (189), Expect(2) = 3e-83
 Identities = 35/47 (74%), Positives = 39/47 (82%)
 Frame = -3

Query: 1253 MADKASRGLVIYGDGLMPLISPSHTHLHQLASRGTCGFLCLPHSPPS 1113
            MADKASRGLVIYGDGL   I+PSH HLH LAS+  CGFL LP++PPS
Sbjct: 1    MADKASRGLVIYGDGLASFINPSHAHLHSLASKAFCGFLTLPNAPPS 47


>ref|XP_002516450.1| conserved hypothetical protein [Ricinus communis]
            gi|223544270|gb|EEF45791.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 313

 Score =  246 bits (629), Expect(2) = 4e-77
 Identities = 131/270 (48%), Positives = 182/270 (67%), Gaps = 5/270 (1%)
 Frame = -2

Query: 1041 ESDDERVVRELAQLLDAYDSYNIRAAKQSSTSESLVQTISERFMGLRAAIFTNDSSVRSF 862
            ES++ER+VRE A L+DAYD+Y     + S+   +L+ TIS+RFM ++AAI T++ S++SF
Sbjct: 48   ESENERIVREFAHLVDAYDAYQ----EMSNEKCTLIPTISQRFMEMKAAIITDNPSLQSF 103

Query: 861  ASLLGLTVLQFDELIMNNNSPREPA----VSGLLKLLGFQGCMALDTCEFDLVFVHIKSG 694
             S LG TVL F  L   + S  E +     S LLKLLGFQ    ++  +FDLV +H  + 
Sbjct: 104  GSKLGFTVLSFKCLNGTHKSHYESSFEDLTSELLKLLGFQEGKTIEASQFDLVILHTGAS 163

Query: 693  GRCSDLKVDIAGGEVEFINGLIGGILEVAQLGSEISTRLHISLVISYGTLAE-DKDSVLN 517
               +    +    +  ++N ++   +  A+ GSEI +RLH+SLV+SYG  ++ D  ++  
Sbjct: 164  ELLNSDSSEATECDAHYLNSMVKETMYNAKPGSEIGSRLHLSLVMSYGNASKIDSTNLSV 223

Query: 516  LSLQEKANPDLSLLFPRQSYITTGKNSADSIRHHCPMLISQWQEAVTRKDTTEIFTFKEF 337
            L  +++ N DLS+L PRQSY   G+   D++RHHCPMLI+QWQ AVTRKDT E +++KEF
Sbjct: 224  LVSKDEMNSDLSVLVPRQSYTMKGEKLRDNVRHHCPMLIAQWQHAVTRKDTAETYSYKEF 283

Query: 336  KEHGANLAIPADRFLHEVAFKLWKAPKYGA 247
            KEHG NL IPADRF+HEVAFKLWKAPKYGA
Sbjct: 284  KEHGVNLVIPADRFIHEVAFKLWKAPKYGA 313



 Score = 69.7 bits (169), Expect(2) = 4e-77
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = -3

Query: 1253 MADKASRGLVIYGDGLMPLISPSHTHLHQLASRGTCGFLCLPHSPPS 1113
            MADK SR LV+YGDGL  LI  SHTH+H LAS+ +CGFL LP++P S
Sbjct: 1    MADKPSRALVLYGDGLAQLIDESHTHIHSLASKASCGFLSLPNAPSS 47


>gb|AFO66525.1| putative Myo28B1 [Brassica napus]
          Length = 303

 Score =  244 bits (622), Expect(2) = 8e-77
 Identities = 128/269 (47%), Positives = 178/269 (66%), Gaps = 4/269 (1%)
 Frame = -2

Query: 1041 ESDDERVVRELAQLLDAYDSYNIRAAKQSSTSESLVQTISERFMGLRAAIFTNDSSVRSF 862
            E++DER+VRE A LLDA ++Y+I +  ++  SE+ + T+SERFMG++AA+ T+ SS+ SF
Sbjct: 48   ETEDERIVREFAHLLDASEAYSIASGLKAKGSENEISTLSERFMGIKAALVTDSSSLTSF 107

Query: 861  ASLLGLTVLQFDELIMNNNS--PREPAVSGLLKLLGFQGCMALDTCEFDLVFVHIKSGGR 688
              L+GL VLQ +E+   ++   P +   + LL+LLGF+G   LD   +D VFVHI     
Sbjct: 108  GKLIGLDVLQLNEIHQKSDDSFPSDATATELLRLLGFEGGKCLDMSLYDSVFVHI----- 162

Query: 687  CSDLKVDIAGGEVEFINGLIGGILEVAQLGSEISTRLHISLVISYGTLAEDKDSVLNLSL 508
                     G  V  IN LIG I+ ++Q GSEI+ RLH+SLV+SYG++ +   S  N+  
Sbjct: 163  --------GGDNVRTINSLIGSIMRMSQPGSEIAPRLHLSLVLSYGSVTDKDVSDFNVKK 214

Query: 507  --QEKANPDLSLLFPRQSYITTGKNSADSIRHHCPMLISQWQEAVTRKDTTEIFTFKEFK 334
              QE  NP    L PRQSY   G+ + D++R +CPML++QWQ+AVTRKD  +  +F+  K
Sbjct: 215  TPQEGINPAFQGLVPRQSYTMRGEKTRDNVRDYCPMLVAQWQDAVTRKDLVDTLSFEALK 274

Query: 333  EHGANLAIPADRFLHEVAFKLWKAPKYGA 247
            +   NL IPADRF+HEVAFKLWKAPKYGA
Sbjct: 275  KLSGNLVIPADRFIHEVAFKLWKAPKYGA 303



 Score = 71.2 bits (173), Expect(2) = 8e-77
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = -3

Query: 1253 MADKASRGLVIYGDGLMPLISPSHTHLHQLASRGTCGFLCLPHSPPS 1113
            MADK SR LV+YGDG    + PS+TH+H LAS GTCGFL LPH+PP+
Sbjct: 1    MADKPSRALVLYGDGSARSVDPSNTHIHSLASVGTCGFLSLPHAPPA 47


>ref|XP_004159543.1| PREDICTED: uncharacterized LOC101217985 [Cucumis sativus]
          Length = 315

 Score =  252 bits (644), Expect(2) = 1e-76
 Identities = 138/269 (51%), Positives = 182/269 (67%), Gaps = 4/269 (1%)
 Frame = -2

Query: 1041 ESDDERVVRELAQLLDAYDSYNIRAAKQSSTSESLVQTISERFMGLRAAIFTNDSSVRSF 862
            ES+++R++REL  L DA DS ++          S  ++I ERFMG+RAA+ TN+S V+S 
Sbjct: 48   ESEEKRMIRELELLFDASDS-DVNKNGGGCEGSSQKKSIPERFMGMRAALLTNNSVVQSL 106

Query: 861  ASLLGLTVLQFDELIMNNNSPREPA---VSGLLKLLGFQGCMALDTCEFDLVFVHIKSGG 691
             S LG+++L+ DEL+  N+    P     S LLK LGFQ     D  EFDL+FVHI  G 
Sbjct: 107  GSELGISLLRLDELMQMNHLGLPPVDFLASELLKRLGFQDGKIQDASEFDLLFVHIGVGD 166

Query: 690  RCSDLKVDIAGGEVEFINGLIGGILEVAQLGSEISTRLHISLVISYGTLAEDKDSVLN-L 514
            + +  K   A  E+++I+ L+G IL+  Q GSEI +RLH+SL++SYG + ED ++ L+ L
Sbjct: 167  KVNGEKDRTASDEMKYIDALVGDILQKTQPGSEIGSRLHLSLLMSYGDVFEDDENSLSVL 226

Query: 513  SLQEKANPDLSLLFPRQSYITTGKNSADSIRHHCPMLISQWQEAVTRKDTTEIFTFKEFK 334
            +     N DLS+LFPRQSY   G+   + IRHH PML +QWQ  VTRKD  E F+FKEFK
Sbjct: 227  TSNCGKNSDLSVLFPRQSYTMMGEVQRNDIRHHSPMLAAQWQYGVTRKDKAETFSFKEFK 286

Query: 333  EHGANLAIPADRFLHEVAFKLWKAPKYGA 247
            EHG+NL IPADRF+HEVAFKLWKAPKYGA
Sbjct: 287  EHGSNLVIPADRFIHEVAFKLWKAPKYGA 315



 Score = 62.0 bits (149), Expect(2) = 1e-76
 Identities = 27/47 (57%), Positives = 35/47 (74%)
 Frame = -3

Query: 1253 MADKASRGLVIYGDGLMPLISPSHTHLHQLASRGTCGFLCLPHSPPS 1113
            MADK SR L ++GDGL   +  SH++LH LAS  +CGFL LP++PPS
Sbjct: 1    MADKPSRALAVFGDGLARFLDQSHSNLHALASLASCGFLSLPNAPPS 47


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