BLASTX nr result
ID: Coptis25_contig00011429
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00011429
(789 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote... 133 6e-72
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera] 133 6e-72
ref|NP_001049077.1| Os03g0166800 [Oryza sativa Japonica Group] g... 117 4e-63
gb|ABF94166.1| Endonuclease/Exonuclease/phosphatase family prote... 117 4e-63
gb|EAY88687.1| hypothetical protein OsI_10162 [Oryza sativa Indi... 117 5e-63
>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
product [Vitis vinifera]
Length = 603
Score = 133 bits (334), Expect(3) = 6e-72
Identities = 72/124 (58%), Positives = 82/124 (66%)
Frame = +3
Query: 315 FGRFNTYXXXXXXXXXXXXTPSIGRNTSLSDGSTPSYPAAVTERSGGETWFEVGRLKTYT 494
FGRFN+ PS + SL++GS P YPAAVT+RSGGETWFEVGR KTYT
Sbjct: 127 FGRFNS---TGSGSINTSLAPSAS-SASLANGSAPLYPAAVTQRSGGETWFEVGRSKTYT 182
Query: 495 PTADDIGHVLKFECVSFDAEKKLHVGHANTILTSHVIXXXXXXXXXXXXXNGVDVMGNLD 674
PTADDIGHVLKFECV DAE KL VGH + ILTS VI +GVD++G+LD
Sbjct: 183 PTADDIGHVLKFECVVVDAETKLTVGHGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLD 242
Query: 675 LDGR 686
DGR
Sbjct: 243 SDGR 246
Score = 126 bits (317), Expect(3) = 6e-72
Identities = 59/74 (79%), Positives = 63/74 (85%)
Frame = +1
Query: 76 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 255
H + YRIQSD KVA+CSVHPSE ATLQCLGCVKAKI VAKSYHCSP+ F DAWQHHR
Sbjct: 47 HFLRYKWYRIQSDRKVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHR 106
Query: 256 TLHERAASAVNENG 297
LH+RAASAVNENG
Sbjct: 107 VLHDRAASAVNENG 120
Score = 59.3 bits (142), Expect(3) = 6e-72
Identities = 27/37 (72%), Positives = 33/37 (89%), Gaps = 4/37 (10%)
Frame = +1
Query: 691 SGTFTVLSYNILSDVYASNDLYSYCPSWA----YRRQ 789
+GTFTVLSYNILSDV+A+++LYSYCPSWA YR+Q
Sbjct: 250 AGTFTVLSYNILSDVFATSELYSYCPSWALSWPYRKQ 286
>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
Length = 603
Score = 133 bits (334), Expect(3) = 6e-72
Identities = 72/124 (58%), Positives = 82/124 (66%)
Frame = +3
Query: 315 FGRFNTYXXXXXXXXXXXXTPSIGRNTSLSDGSTPSYPAAVTERSGGETWFEVGRLKTYT 494
FGRFN+ PS + SL++GS P YPAAVT+RSGGETWFEVGR KTYT
Sbjct: 127 FGRFNS---TGSGSINTSLAPSAS-SASLANGSAPLYPAAVTQRSGGETWFEVGRSKTYT 182
Query: 495 PTADDIGHVLKFECVSFDAEKKLHVGHANTILTSHVIXXXXXXXXXXXXXNGVDVMGNLD 674
PTADDIGHVLKFECV DAE KL VGH + ILTS VI +GVD++G+LD
Sbjct: 183 PTADDIGHVLKFECVVVDAETKLTVGHGSNILTSRVIPAPSPTPRHLISVSGVDMVGHLD 242
Query: 675 LDGR 686
DGR
Sbjct: 243 SDGR 246
Score = 126 bits (317), Expect(3) = 6e-72
Identities = 59/74 (79%), Positives = 63/74 (85%)
Frame = +1
Query: 76 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 255
H + YRIQSD KVA+CSVHPSE ATLQCLGCVKAKI VAKSYHCSP+ F DAWQHHR
Sbjct: 47 HFLRYKWYRIQSDRKVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHR 106
Query: 256 TLHERAASAVNENG 297
LH+RAASAVNENG
Sbjct: 107 VLHDRAASAVNENG 120
Score = 59.3 bits (142), Expect(3) = 6e-72
Identities = 27/37 (72%), Positives = 33/37 (89%), Gaps = 4/37 (10%)
Frame = +1
Query: 691 SGTFTVLSYNILSDVYASNDLYSYCPSWA----YRRQ 789
+GTFTVLSYNILSDV+A+++LYSYCPSWA YR+Q
Sbjct: 250 AGTFTVLSYNILSDVFATSELYSYCPSWALSWPYRKQ 286
>ref|NP_001049077.1| Os03g0166800 [Oryza sativa Japonica Group]
gi|108706369|gb|ABF94164.1|
Endonuclease/Exonuclease/phosphatase family protein,
expressed [Oryza sativa Japonica Group]
gi|108706370|gb|ABF94165.1|
Endonuclease/Exonuclease/phosphatase family protein,
expressed [Oryza sativa Japonica Group]
gi|113547548|dbj|BAF10991.1| Os03g0166800 [Oryza sativa
Japonica Group] gi|125585049|gb|EAZ25713.1| hypothetical
protein OsJ_09546 [Oryza sativa Japonica Group]
Length = 607
Score = 117 bits (292), Expect(3) = 4e-63
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +1
Query: 76 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 255
H + YRIQSD +VA+C+VHP+EQAT+QCLGC+K+KI VAKSYHCS + F DAWQHHR
Sbjct: 47 HFMRYKWYRIQSDRRVAVCNVHPTEQATIQCLGCLKSKIPVAKSYHCSAKCFSDAWQHHR 106
Query: 256 TLHERAASAVNENG 297
LHERA SA+NENG
Sbjct: 107 VLHERALSALNENG 120
Score = 115 bits (287), Expect(3) = 4e-63
Identities = 58/124 (46%), Positives = 76/124 (61%)
Frame = +3
Query: 315 FGRFNTYXXXXXXXXXXXXTPSIGRNTSLSDGSTPSYPAAVTERSGGETWFEVGRLKTYT 494
FGRF + T +IG+++S+++G TP YP TE++ GETWFEVGR +TYT
Sbjct: 127 FGRFGSGNAGIINASLSGSTSNIGQSSSVNNGPTPVYPTG-TEKNSGETWFEVGRSRTYT 185
Query: 495 PTADDIGHVLKFECVSFDAEKKLHVGHANTILTSHVIXXXXXXXXXXXXXNGVDVMGNLD 674
PTADDIGH L+FECV+ D+E + VG +I+TS VI N DVMG+ D
Sbjct: 186 PTADDIGHALRFECVAVDSETRSSVGAPTSIMTSRVIPAPTPTPRRLIPVNSADVMGHFD 245
Query: 675 LDGR 686
LD R
Sbjct: 246 LDSR 249
Score = 57.4 bits (137), Expect(3) = 4e-63
Identities = 26/36 (72%), Positives = 30/36 (83%), Gaps = 4/36 (11%)
Frame = +1
Query: 694 GTFTVLSYNILSDVYASNDLYSYCPSWA----YRRQ 789
GTFTVLSYNIL+D YA++D YSYCP+WA YRRQ
Sbjct: 254 GTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQ 289
>gb|ABF94166.1| Endonuclease/Exonuclease/phosphatase family protein, expressed
[Oryza sativa Japonica Group]
Length = 605
Score = 117 bits (292), Expect(3) = 4e-63
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +1
Query: 76 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 255
H + YRIQSD +VA+C+VHP+EQAT+QCLGC+K+KI VAKSYHCS + F DAWQHHR
Sbjct: 47 HFMRYKWYRIQSDRRVAVCNVHPTEQATIQCLGCLKSKIPVAKSYHCSAKCFSDAWQHHR 106
Query: 256 TLHERAASAVNENG 297
LHERA SA+NENG
Sbjct: 107 VLHERALSALNENG 120
Score = 115 bits (287), Expect(3) = 4e-63
Identities = 58/124 (46%), Positives = 76/124 (61%)
Frame = +3
Query: 315 FGRFNTYXXXXXXXXXXXXTPSIGRNTSLSDGSTPSYPAAVTERSGGETWFEVGRLKTYT 494
FGRF + T +IG+++S+++G TP YP TE++ GETWFEVGR +TYT
Sbjct: 127 FGRFGSGNAGIINASLSGSTSNIGQSSSVNNGPTPVYPTG-TEKNSGETWFEVGRSRTYT 185
Query: 495 PTADDIGHVLKFECVSFDAEKKLHVGHANTILTSHVIXXXXXXXXXXXXXNGVDVMGNLD 674
PTADDIGH L+FECV+ D+E + VG +I+TS VI N DVMG+ D
Sbjct: 186 PTADDIGHALRFECVAVDSETRSSVGAPTSIMTSRVIPAPTPTPRRLIPVNSADVMGHFD 245
Query: 675 LDGR 686
LD R
Sbjct: 246 LDSR 249
Score = 57.4 bits (137), Expect(3) = 4e-63
Identities = 26/36 (72%), Positives = 30/36 (83%), Gaps = 4/36 (11%)
Frame = +1
Query: 694 GTFTVLSYNILSDVYASNDLYSYCPSWA----YRRQ 789
GTFTVLSYNIL+D YA++D YSYCP+WA YRRQ
Sbjct: 254 GTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQ 289
>gb|EAY88687.1| hypothetical protein OsI_10162 [Oryza sativa Indica Group]
Length = 607
Score = 117 bits (292), Expect(3) = 5e-63
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +1
Query: 76 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 255
H + YRIQSD +VA+C+VHP+EQAT+QCLGC+K+KI VAKSYHCS + F DAWQHHR
Sbjct: 47 HFMRYKWYRIQSDRRVAVCNVHPTEQATIQCLGCLKSKIPVAKSYHCSAKCFSDAWQHHR 106
Query: 256 TLHERAASAVNENG 297
LHERA SA+NENG
Sbjct: 107 VLHERALSALNENG 120
Score = 114 bits (286), Expect(3) = 5e-63
Identities = 58/124 (46%), Positives = 75/124 (60%)
Frame = +3
Query: 315 FGRFNTYXXXXXXXXXXXXTPSIGRNTSLSDGSTPSYPAAVTERSGGETWFEVGRLKTYT 494
FGRF + T +IG+++S+++G TP YP TE++ GETWFEVGR +TYT
Sbjct: 127 FGRFGSGNAGIINASLSGSTSNIGQSSSVNNGPTPVYPTG-TEKNSGETWFEVGRSRTYT 185
Query: 495 PTADDIGHVLKFECVSFDAEKKLHVGHANTILTSHVIXXXXXXXXXXXXXNGVDVMGNLD 674
PTADDIGH L+FECV+ D+E + VG +I+TS VI N DVMG D
Sbjct: 186 PTADDIGHALRFECVAVDSETRSSVGAPTSIMTSRVIPAPTPTPRRLIPVNSADVMGQFD 245
Query: 675 LDGR 686
LD R
Sbjct: 246 LDSR 249
Score = 57.4 bits (137), Expect(3) = 5e-63
Identities = 26/36 (72%), Positives = 30/36 (83%), Gaps = 4/36 (11%)
Frame = +1
Query: 694 GTFTVLSYNILSDVYASNDLYSYCPSWA----YRRQ 789
GTFTVLSYNIL+D YA++D YSYCP+WA YRRQ
Sbjct: 254 GTFTVLSYNILADTYATSDTYSYCPTWALSWPYRRQ 289