BLASTX nr result

ID: Coptis25_contig00011416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00011416
         (1376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530838.1| conserved hypothetical protein [Ricinus comm...   143   7e-46
ref|XP_002309027.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-44
emb|CBI27692.3| unnamed protein product [Vitis vinifera]              131   2e-40
ref|XP_003516996.1| PREDICTED: uncharacterized protein LOC100810...   119   6e-35
ref|XP_004145837.1| PREDICTED: uncharacterized protein LOC101219...   108   8e-30

>ref|XP_002530838.1| conserved hypothetical protein [Ricinus communis]
           gi|223529602|gb|EEF31551.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  143 bits (361), Expect(2) = 7e-46
 Identities = 83/163 (50%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
 Frame = +3

Query: 270 LLRRLISLYSPKATNSSLTEEARKXXXXXXXXXXXTAPGAGE-TSRTSKVKYPHNGGDNR 446
           LLRRL SLYS KATNSS                        E +S   + KY  NG  N 
Sbjct: 203 LLRRLHSLYSLKATNSSQGSSLLPANDHDNHRLLSKKLDVSEESSEVLESKYLPNGETNV 262

Query: 447 KQTTFKFTERVESCLWWFRTVSLKFGSVRLVISHGKIVLWS-SFIIFICYVLQKKRATLR 623
           KQ     + RV  CLWWFRT++LKFG+ RLVIS+GKI+L   +F+I+  YVL++K+ATL+
Sbjct: 263 KQEILTLSRRVNPCLWWFRTINLKFGNARLVISNGKILLGCLAFLIY--YVLRRKQATLK 320

Query: 624 RMASRQALTVKKALVDMWQLAFSVQVNPLAAIEPLPAGTRGSR 752
            +  RQ   +KKALVD+WQL FS QVNPLAA++PLPA TRG R
Sbjct: 321 GIVRRQFFFIKKALVDIWQLGFSYQVNPLAAVQPLPAATRGGR 363



 Score = 68.6 bits (166), Expect(2) = 7e-46
 Identities = 31/60 (51%), Positives = 46/60 (76%)
 Frame = +1

Query: 1   NASYFKGCNGESVLAIDKYLDVVEIYAVTLLGEKLNNTDLAITWVEKAELPDEKRQVFFK 180
           +A+  +G +  S+L +D+Y++V EIYAVTLLG  L + DLAI+WVEKA LP+E++QV  +
Sbjct: 146 DANLQEGYDKSSILGVDEYMEVAEIYAVTLLGTALKDLDLAISWVEKAALPEERQQVLLR 205


>ref|XP_002309027.1| predicted protein [Populus trichocarpa] gi|222855003|gb|EEE92550.1|
           predicted protein [Populus trichocarpa]
          Length = 361

 Score =  137 bits (346), Expect(2) = 1e-44
 Identities = 76/162 (46%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
 Frame = +3

Query: 270 LLRRLISLYSPKATNSS-LTEEARKXXXXXXXXXXXTAPGAGETSRTSKVKYPHNGGDNR 446
           LLRRL SLYS K  NSS ++    +              G   + +  +  Y   G +N 
Sbjct: 201 LLRRLHSLYSLKTINSSQVSAVMHENNHKAHYSLSKELNGFEGSPKGLEANYLPPGENNT 260

Query: 447 KQTTFKFTERVESCLWWFRTVSLKFGSVRLVISHGKIVLWSSFIIFICYVLQKKRATLRR 626
           KQT  K + RV+ CLWWFR+V+LKFG+VR+V+++GKI+L   F++   YVL++K ATL  
Sbjct: 261 KQTILKLSRRVDPCLWWFRSVNLKFGNVRVVVTNGKILLGFLFLLTY-YVLRRKGATLNG 319

Query: 627 MASRQALTVKKALVDMWQLAFSVQVNPLAAIEPLPAGTRGSR 752
           +  RQ    KKA+VD+WQLAFS QVNPLAA++PLP  TRG R
Sbjct: 320 LVRRQVSAAKKAMVDLWQLAFSYQVNPLAAVQPLPTATRGGR 361



 Score = 70.1 bits (170), Expect(2) = 1e-44
 Identities = 30/54 (55%), Positives = 42/54 (77%)
 Frame = +1

Query: 19  GCNGESVLAIDKYLDVVEIYAVTLLGEKLNNTDLAITWVEKAELPDEKRQVFFK 180
           GC+   +L +DKY++VVE+YAVTLLG  L + D AI+WVEK+ LP+E+RQV  +
Sbjct: 150 GCDRRCILEVDKYMEVVEVYAVTLLGTTLKDMDSAISWVEKSALPEERRQVLLR 203


>emb|CBI27692.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  131 bits (329), Expect(2) = 2e-40
 Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
 Frame = +3

Query: 264 KELLRRLISLYSPKA--TNSSLTEEARKXXXXXXXXXXXTAPGAGETSRTSKVKYPHNGG 437
           KELL  L SL+ PKA  +  SL+                     G          P NG 
Sbjct: 233 KELLMTLHSLHPPKAKLSQGSLSNSLVDDHEAHCSSSKEVILSEGHLKGLKPQHPPTNGE 292

Query: 438 DNRKQTTFKFTERVESCLWWFRTVSLKFGSVRLVISHGKIVLWSSFIIFICYVLQKKRAT 617
            +R+ T    ++R++SC WW+R+++LK G+ R+VIS+GKI+L    I  + Y+ ++KRAT
Sbjct: 293 KDRRTTVLNLSKRMDSCFWWYRSITLKLGNTRVVISNGKIML-GCLIFLVYYIFRRKRAT 351

Query: 618 LRRMASRQALTVKKALVDMWQLAFSVQVNPLAAIEPLPAGTRGSR 752
           L+R+ASRQA ++K+AL  +WQLAFS QVNPLAA++PLPA   G+R
Sbjct: 352 LKRIASRQASSMKEALTSLWQLAFSYQVNPLAALQPLPAAAPGNR 396



 Score = 62.8 bits (151), Expect(2) = 2e-40
 Identities = 28/50 (56%), Positives = 38/50 (76%)
 Frame = +1

Query: 19  GCNGESVLAIDKYLDVVEIYAVTLLGEKLNNTDLAITWVEKAELPDEKRQ 168
           GC+    L I +YL+VV++Y VTLLG  LN+ + A +WVEKAELP+EKR+
Sbjct: 184 GCDRSFTLGIGEYLEVVDVYVVTLLGSVLNDMEHAFSWVEKAELPEEKRK 233


>ref|XP_003516996.1| PREDICTED: uncharacterized protein LOC100810680 [Glycine max]
          Length = 347

 Score =  119 bits (298), Expect(2) = 6e-35
 Identities = 69/161 (42%), Positives = 98/161 (60%), Gaps = 3/161 (1%)
 Frame = +3

Query: 270 LLRRLISLYSPKAT---NSSLTEEARKXXXXXXXXXXXTAPGAGETSRTSKVKYPHNGGD 440
           LLR L S++S K+T    SS  +                + G  +  ++++ KY      
Sbjct: 192 LLRSLHSMHSSKSTILSQSSFQQSPTNSNEAYPLKEQSVSEGLPKALKSNE-KY------ 244

Query: 441 NRKQTTFKFTERVESCLWWFRTVSLKFGSVRLVISHGKIVLWSSFIIFICYVLQKKRATL 620
             K+   K +ER+E+C W FR ++LK G+ + VI+ GKI+L    I+FI YV +KK+ATL
Sbjct: 245 RSKEAVTKLSERIEACFWCFRGINLKIGTTKFVITSGKIML-GCLILFIYYVFRKKQATL 303

Query: 621 RRMASRQALTVKKALVDMWQLAFSVQVNPLAAIEPLPAGTR 743
            R+  RQA+ VK+ALVD+WQLAFS QVNPLAA++PL A TR
Sbjct: 304 NRIVRRQAMAVKRALVDLWQLAFSYQVNPLAAVQPLSAATR 344



 Score = 56.2 bits (134), Expect(2) = 6e-35
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = +1

Query: 37  VLAIDKYLDVVEIYAVTLLGEKLNNTDLAITWVEKAELPDEKRQ 168
           +L +D+YL VVE+YA+TLL     + DLAI+WVE A LP+E RQ
Sbjct: 147 ILPVDEYLQVVELYALTLLATVQKDVDLAISWVENASLPEENRQ 190


>ref|XP_004145837.1| PREDICTED: uncharacterized protein LOC101219185 [Cucumis sativus]
           gi|449520495|ref|XP_004167269.1| PREDICTED:
           uncharacterized LOC101219185 [Cucumis sativus]
          Length = 344

 Score =  108 bits (271), Expect(2) = 8e-30
 Identities = 65/159 (40%), Positives = 91/159 (57%)
 Frame = +3

Query: 270 LLRRLISLYSPKATNSSLTEEARKXXXXXXXXXXXTAPGAGETSRTSKVKYPHNGGDNRK 449
           +LRRL  L S KA +SS  + +             ++    + S T+      +GG   +
Sbjct: 187 ILRRLDYLQSKKAASSS--QSSSSSLLRNDHRTHLSSSEGLQASETALDPAYQDGGSANR 244

Query: 450 QTTFKFTERVESCLWWFRTVSLKFGSVRLVISHGKIVLWSSFIIFICYVLQKKRATLRRM 629
           +T  +  +  +   W FRT++LKFGS RLVIS  KIVL S  ++ I Y+L++K   L+RM
Sbjct: 245 ETVLRLHKLTKPSFWPFRTITLKFGSFRLVISTRKIVL-SCLLVLIYYLLRRKLTALKRM 303

Query: 630 ASRQALTVKKALVDMWQLAFSVQVNPLAAIEPLPAGTRG 746
           A  Q  ++KKALVD+WQLAFS QVNPLA  +PL    RG
Sbjct: 304 AQEQGSSMKKALVDLWQLAFSYQVNPLAIAQPLSGAARG 342



 Score = 49.3 bits (116), Expect(2) = 8e-30
 Identities = 21/52 (40%), Positives = 34/52 (65%)
 Frame = +1

Query: 25  NGESVLAIDKYLDVVEIYAVTLLGEKLNNTDLAITWVEKAELPDEKRQVFFK 180
           +G + L +D+YL +V +Y   +    L + DLA++WVEKA LP+ KRQ+  +
Sbjct: 138 DGHAQLTVDEYLQLVHVYLRIVTEIGLKDVDLAVSWVEKAALPEGKRQIILR 189


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